RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 FAM47E-STBD1D6RA91 191 aa11.54□□□□□ -0.56
COL6A1-205ENST00000492851 FOXE1O00358 373 aaPredicted RBP11.54□□□□□ -0.56
COL6A1-205ENST00000492851 RTCAO00442 366 aaKnown RBP11.54□□□□□ -0.56
COL6A1-205ENST00000492851 SNRPB2P08579 225 aaKnown RBP11.54□□□□□ -0.56
COL6A1-205ENST00000492851 HOXD4P09016 255 aaPredicted RBP11.54□□□□□ -0.56
COL6A1-205ENST00000492851 MTHFD2P13995 350 aa11.54□□□□□ -0.56
COL6A1-205ENST00000492851 ALOX15P16050 662 aaPredicted RBP11.54□□□□□ -0.56
COL6A1-205ENST00000492851 TYK2P29597 1187 aa11.54□□□□□ -0.56
COL6A1-205ENST00000492851 CHRNB4P30926 498 aa11.54□□□□□ -0.56
COL6A1-205ENST00000492851 GALNSP34059 522 aa11.54□□□□□ -0.56
COL6A1-205ENST00000492851 RFC3P40938 356 aa11.54□□□□□ -0.56
COL6A1-205ENST00000492851 DLG1Q12959 904 aa11.54□□□□□ -0.56
COL6A1-205ENST00000492851 SLC10A1Q14973 349 aa11.54□□□□□ -0.56
COL6A1-205ENST00000492851 PCBP2Q15366 365 aaKnown RBP eCLIP11.54□□□□□ -0.56
COL6A1-205ENST00000492851 PFKFB4Q16877 469 aa11.54□□□□□ -0.56
COL6A1-205ENST00000492851 MROH9Q5TGP6 573 aa11.54□□□□□ -0.56
COL6A1-205ENST00000492851 SLC22A10Q63ZE4 541 aa11.54□□□□□ -0.56
COL6A1-205ENST00000492851 CYP20A1Q6UW02 462 aa11.54□□□□□ -0.56
COL6A1-205ENST00000492851 ZDHHC24Q6UX98 284 aa11.54□□□□□ -0.56
COL6A1-205ENST00000492851 SYT10Q6XYQ8 523 aa11.54□□□□□ -0.56
COL6A1-205ENST00000492851 FAM47EQ6ZV65 393 aa11.54□□□□□ -0.56
COL6A1-205ENST00000492851 CD163Q86VB7 1156 aa11.54□□□□□ -0.56
COL6A1-205ENST00000492851 MYLK4Q86YV6 388 aaPredicted RBP11.54□□□□□ -0.56
COL6A1-205ENST00000492851 ST13P4Q8IZP2 240 aaPredicted RBP11.54□□□□□ -0.56
COL6A1-205ENST00000492851 FAM109AQ8N4B1 249 aa11.54□□□□□ -0.56
COL6A1-205ENST00000492851 LILRB4Q8NHJ6 448 aa11.54□□□□□ -0.56
COL6A1-205ENST00000492851 ZNF721Q8TF20 911 aa11.54□□□□□ -0.56
COL6A1-205ENST00000492851 CHTF18Q8WVB6 975 aa11.54□□□□□ -0.56
COL6A1-205ENST00000492851 FBXL20Q96IG2 436 aa11.54□□□□□ -0.56
COL6A1-205ENST00000492851 SCYL1Q96KG9 808 aa11.54□□□□□ -0.56
COL6A1-205ENST00000492851 TTTY12Q9BZ98 90 aa11.54□□□□□ -0.56
COL6A1-205ENST00000492851 ENKD1Q9H0I2 346 aa11.54□□□□□ -0.56
COL6A1-205ENST00000492851 DEFB127Q9H1M4 99 aa11.54□□□□□ -0.56
COL6A1-205ENST00000492851 IPPKQ9H8X2 491 aa11.54□□□□□ -0.56
COL6A1-205ENST00000492851 LIN28AQ9H9Z2 209 aaKnown RBP11.54□□□□□ -0.56
COL6A1-205ENST00000492851 DMRT3Q9NQL9 472 aa11.54□□□□□ -0.56
COL6A1-205ENST00000492851 LYARQ9NX58 379 aaKnown RBP11.54□□□□□ -0.56
COL6A1-205ENST00000492851 AHSPQ9NZD4 102 aa11.54□□□□□ -0.56
COL6A1-205ENST00000492851 MTRF1LQ9UGC7 380 aaKnown RBP11.54□□□□□ -0.56
COL6A1-205ENST00000492851 CREBBPQ92793 2442 aa11.54□□□□□ -0.56
COL6A1-205ENST00000492851 SVILO95425 2214 aa11.54□□□□□ -0.56
COL6A1-205ENST00000492851 DIDO1Q9BTC0 2240 aaKnown RBP11.54□□□□□ -0.56
COL6A1-205ENST00000492851 OR6C76A6NM76 312 aa11.53□□□□□ -0.56
COL6A1-205ENST00000492851 FIGNL2A6NMB9 653 aa11.53□□□□□ -0.56
COL6A1-205ENST00000492851 CAPN14A8MX76 684 aa11.53□□□□□ -0.56
COL6A1-205ENST00000492851 SAP18O00422 153 aaKnown RBP11.53□□□□□ -0.56
COL6A1-205ENST00000492851 PROM1O43490 865 aa11.53□□□□□ -0.56
COL6A1-205ENST00000492851 KLK8O60259 260 aa11.53□□□□□ -0.56
COL6A1-205ENST00000492851 SUSD5O60279 629 aa11.53□□□□□ -0.56
COL6A1-205ENST00000492851 PDE9AO76083 593 aa11.53□□□□□ -0.56
COL6A1-205ENST00000492851 GLSO94925 669 aaPredicted RBP11.53□□□□□ -0.56
COL6A1-205ENST00000492851 CLDN9O95484 217 aa11.53□□□□□ -0.56
COL6A1-205ENST00000492851 ETHE1O95571 254 aa11.53□□□□□ -0.56
COL6A1-205ENST00000492851 GPR75O95800 540 aa11.53□□□□□ -0.56
COL6A1-205ENST00000492851 RBP1P09455 135 aa11.53□□□□□ -0.56
COL6A1-205ENST00000492851 SERPINB3P29508 390 aa11.53□□□□□ -0.56
COL6A1-205ENST00000492851 SERPINB8P50452 374 aa11.53□□□□□ -0.56
COL6A1-205ENST00000492851 TNFRSF17Q02223 184 aa11.53□□□□□ -0.56
COL6A1-205ENST00000492851 DDX39BQ13838 428 aaKnown RBP11.53□□□□□ -0.56
COL6A1-205ENST00000492851 GTF2H2Q13888 395 aa11.53□□□□□ -0.56
COL6A1-205ENST00000492851 ZNF750Q32MQ0 723 aa11.53□□□□□ -0.56
COL6A1-205ENST00000492851 GXYLT1Q4G148 440 aa11.53□□□□□ -0.56
COL6A1-205ENST00000492851 C8orf74Q6P047 294 aa11.53□□□□□ -0.56
COL6A1-205ENST00000492851 GTF2H2CQ6P1K8 395 aa11.53□□□□□ -0.56
COL6A1-205ENST00000492851 C3P1Q6ZMU1 363 aa11.53□□□□□ -0.56
COL6A1-205ENST00000492851 C16orf47Q6ZP98 133 aaPredicted RBP11.53□□□□□ -0.56
COL6A1-205ENST00000492851 TAOK1Q7L7X3 1001 aa11.53□□□□□ -0.56
COL6A1-205ENST00000492851 SLC29A4Q7RTT9 530 aa11.53□□□□□ -0.56
COL6A1-205ENST00000492851 RELL1Q8IUW5 271 aa11.53□□□□□ -0.56
COL6A1-205ENST00000492851 CENPLQ8N0S6 344 aaPredicted RBP11.53□□□□□ -0.56
COL6A1-205ENST00000492851 RIT1Q92963 219 aa11.53□□□□□ -0.56
COL6A1-205ENST00000492851 ATP6V1E2Q96A05 226 aa11.53□□□□□ -0.56
COL6A1-205ENST00000492851 SARAFQ96BY9 339 aa11.53□□□□□ -0.56
COL6A1-205ENST00000492851 LURAP1Q96LR2 239 aa11.53□□□□□ -0.56
COL6A1-205ENST00000492851 MTERF1Q99551 399 aaKnown RBP11.53□□□□□ -0.56
COL6A1-205ENST00000492851 TRIM8Q9BZR9 551 aa11.53□□□□□ -0.56
COL6A1-205ENST00000492851 DDX31Q9H8H2 851 aaKnown RBP11.53□□□□□ -0.56
COL6A1-205ENST00000492851 KCNJ16Q9NPI9 418 aa11.53□□□□□ -0.56
COL6A1-205ENST00000492851 SNX15Q9NRS6 342 aa11.53□□□□□ -0.56
COL6A1-205ENST00000492851 DEPPQ9NTK1 212 aa11.53□□□□□ -0.56
COL6A1-205ENST00000492851 CNIH4Q9P003 139 aa11.53□□□□□ -0.56
COL6A1-205ENST00000492851 IKBKGQ9Y6K9 419 aa11.53□□□□□ -0.56
COL6A1-205ENST00000492851 CACNA1DQ01668 2161 aa11.52□□□□□ -0.56
COL6A1-205ENST00000492851 A0A1B0GVC2 190 aa11.52□□□□□ -0.57
COL6A1-205ENST00000492851 PLPP1O14494 284 aa11.52□□□□□ -0.57
COL6A1-205ENST00000492851 FGF17O60258 216 aa11.52□□□□□ -0.57
COL6A1-205ENST00000492851 OR10H2O60403 315 aa11.52□□□□□ -0.57
COL6A1-205ENST00000492851 HCN1O60741 890 aa11.52□□□□□ -0.57
COL6A1-205ENST00000492851 SH3BGRLO75368 114 aa11.52□□□□□ -0.57
COL6A1-205ENST00000492851 SEMA3DO95025 777 aa11.52□□□□□ -0.57
COL6A1-205ENST00000492851 IGHG3P01860 377 aa11.52□□□□□ -0.57
COL6A1-205ENST00000492851 IGKV3-11P04433 115 aa11.52□□□□□ -0.57
COL6A1-205ENST00000492851 SLC35E2P0CK97 266 aa11.52□□□□□ -0.57
COL6A1-205ENST00000492851 COL6A2P12110 1019 aa11.52□□□□□ -0.57
COL6A1-205ENST00000492851 KIR3DL1P43629 444 aa11.52□□□□□ -0.57
COL6A1-205ENST00000492851 RPS13P62277 151 aaKnown RBP11.52□□□□□ -0.57
COL6A1-205ENST00000492851 ID2Q02363 134 aa11.52□□□□□ -0.57
COL6A1-205ENST00000492851 FOLH1Q04609 750 aa11.52□□□□□ -0.57
COL6A1-205ENST00000492851 ASPHQ12797 758 aa11.52□□□□□ -0.57
COL6A1-205ENST00000492851 UAP1Q16222 522 aaPredicted RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms