RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 DNAJB5O75953 348 aa12.23□□□□□ -0.45
PRAME-213ENST00000492657 POU2F2P09086 479 aa12.23□□□□□ -0.45
PRAME-213ENST00000492657 DDCP20711 480 aa12.23□□□□□ -0.45
PRAME-213ENST00000492657 RPL3P39023 403 aaKnown RBP12.23□□□□□ -0.45
PRAME-213ENST00000492657 IDH2P48735 452 aaKnown RBP12.23□□□□□ -0.45
PRAME-213ENST00000492657 CCR8P51685 355 aa12.23□□□□□ -0.45
PRAME-213ENST00000492657 MANFP55145 182 aaKnown RBP12.23□□□□□ -0.45
PRAME-213ENST00000492657 SEC13P55735 322 aa12.23□□□□□ -0.45
PRAME-213ENST00000492657 DSTNP60981 165 aa12.23□□□□□ -0.45
PRAME-213ENST00000492657 CXCR4P61073 352 aa12.23□□□□□ -0.45
PRAME-213ENST00000492657 RBBP4Q09028 425 aa12.23□□□□□ -0.45
PRAME-213ENST00000492657 RPA4Q13156 261 aa12.23□□□□□ -0.45
PRAME-213ENST00000492657 FADDQ13158 208 aa12.23□□□□□ -0.45
PRAME-213ENST00000492657 CST6Q15828 149 aa12.23□□□□□ -0.45
PRAME-213ENST00000492657 ZNF630Q2M218 657 aaPredicted RBP12.23□□□□□ -0.45
PRAME-213ENST00000492657 OLIG3Q7RTU3 272 aa12.23□□□□□ -0.45
PRAME-213ENST00000492657 PROX1Q92786 737 aa12.23□□□□□ -0.45
PRAME-213ENST00000492657 GTPBP3Q969Y2 492 aaKnown RBP12.23□□□□□ -0.45
PRAME-213ENST00000492657 C12orf66Q96MD2 445 aa12.23□□□□□ -0.45
PRAME-213ENST00000492657 GABARAPL3Q9BY60 117 aa12.23□□□□□ -0.45
PRAME-213ENST00000492657 RHBGQ9H310 441 aa12.23□□□□□ -0.45
PRAME-213ENST00000492657 ACOT13Q9NPJ3 140 aa12.23□□□□□ -0.45
PRAME-213ENST00000492657 SCHIP1Q9P0W5 487 aaPredicted RBP12.23□□□□□ -0.45
PRAME-213ENST00000492657 ZFR2Q9UPR6 939 aaKnown RBP12.23□□□□□ -0.45
PRAME-213ENST00000492657 TRIOO75962 3097 aa12.22□□□□□ -0.45
PRAME-213ENST00000492657 COL4A3Q01955 1670 aa12.22□□□□□ -0.45
PRAME-213ENST00000492657 SCN3AQ9NY46 2000 aa12.22□□□□□ -0.45
PRAME-213ENST00000492657 ADAMDEC1O15204 470 aa12.22□□□□□ -0.45
PRAME-213ENST00000492657 SLC22A1O15245 554 aa12.22□□□□□ -0.45
PRAME-213ENST00000492657 PRKRAO75569 313 aaKnown RBP12.22□□□□□ -0.45
PRAME-213ENST00000492657 KRT75O95678 551 aa12.22□□□□□ -0.45
PRAME-213ENST00000492657 SLC35G4P0C7Q5 338 aa12.22□□□□□ -0.45
PRAME-213ENST00000492657 ERGP11308 486 aa12.22□□□□□ -0.45
PRAME-213ENST00000492657 HOXB3P14651 431 aaPredicted RBP12.22□□□□□ -0.45
PRAME-213ENST00000492657 UQCRC2P22695 453 aa12.22□□□□□ -0.45
PRAME-213ENST00000492657 PBX2P40425 430 aa12.22□□□□□ -0.45
PRAME-213ENST00000492657 PCBP3P57721 371 aaKnown RBP12.22□□□□□ -0.45
PRAME-213ENST00000492657 PUM1Q14671 1186 aaKnown RBP eCLIP12.22□□□□□ -0.452e-12■□□□□ 10.5
PRAME-213ENST00000492657 DUSP6Q16828 381 aa12.22□□□□□ -0.45
PRAME-213ENST00000492657 CRB2Q5IJ48 1285 aa12.22□□□□□ -0.45
PRAME-213ENST00000492657 SMPDL3AQ92484 453 aa12.22□□□□□ -0.45
PRAME-213ENST00000492657 RAB7BQ96AH8 199 aa12.22□□□□□ -0.45
PRAME-213ENST00000492657 MTERF3Q96E29 417 aa12.22□□□□□ -0.45
PRAME-213ENST00000492657 YIPF6Q96EC8 236 aa12.22□□□□□ -0.45
PRAME-213ENST00000492657 OTUB1Q96FW1 271 aaPredicted RBP12.22□□□□□ -0.45
PRAME-213ENST00000492657 NLNQ9BYT8 704 aa12.22□□□□□ -0.45
PRAME-213ENST00000492657 AICDAQ9GZX7 198 aa12.22□□□□□ -0.45
PRAME-213ENST00000492657 AKIP1Q9NQ31 210 aa12.22□□□□□ -0.45
PRAME-213ENST00000492657 IMP3Q9NV31 184 aaKnown RBP12.22□□□□□ -0.45
PRAME-213ENST00000492657 AHSPQ9NZD4 102 aa12.22□□□□□ -0.45
PRAME-213ENST00000492657 MOSPD1Q9UJG1 213 aa12.22□□□□□ -0.45
PRAME-213ENST00000492657 CAB39Q9Y376 341 aaPredicted RBP12.22□□□□□ -0.45
PRAME-213ENST00000492657 ATG2AQ2TAZ0 1938 aa12.22□□□□□ -0.45
PRAME-213ENST00000492657 A0A0C4DFX4 3053 aa12.22□□□□□ -0.45
PRAME-213ENST00000492657 TGM1P22735 817 aa12.22□□□□□ -0.45
PRAME-213ENST00000492657 XCR1P46094 333 aa12.22□□□□□ -0.45
PRAME-213ENST00000492657 ST13P50502 369 aaKnown RBP12.22□□□□□ -0.45
PRAME-213ENST00000492657 IFITM2Q01629 132 aa12.22□□□□□ -0.45
PRAME-213ENST00000492657 DGUOKQ16854 277 aa12.22□□□□□ -0.45
PRAME-213ENST00000492657 MICAQ29983 383 aa12.22□□□□□ -0.45
PRAME-213ENST00000492657 PROX2Q3B8N5 592 aa12.22□□□□□ -0.45
PRAME-213ENST00000492657 UBE2UQ5VVX9 321 aa12.22□□□□□ -0.45
PRAME-213ENST00000492657 SPATC1Q76KD6 591 aa12.22□□□□□ -0.45
PRAME-213ENST00000492657 HMGN2P46Q86SG4 172 aa12.22□□□□□ -0.45
PRAME-213ENST00000492657 UTP15Q8TED0 518 aaKnown RBP12.22□□□□□ -0.45
PRAME-213ENST00000492657 SLC38A5Q8WUX1 472 aa12.22□□□□□ -0.45
PRAME-213ENST00000492657 JPH3Q8WXH2 748 aaPredicted RBP12.22□□□□□ -0.45
PRAME-213ENST00000492657 WFDC6Q9BQY6 131 aa12.22□□□□□ -0.45
PRAME-213ENST00000492657 WDR12Q9GZL7 423 aaKnown RBP12.22□□□□□ -0.45
PRAME-213ENST00000492657 PCDHGA2Q9Y5H1 932 aa12.22□□□□□ -0.45
PRAME-213ENST00000492657 MDC1Q14676 2089 aaKnown RBP12.21□□□□□ -0.45
PRAME-213ENST00000492657 IGKV1-8A0A0C4DH67 115 aa12.21□□□□□ -0.45
PRAME-213ENST00000492657 OR52A4PA6NMU1 304 aa12.21□□□□□ -0.45
PRAME-213ENST00000492657 CAPN5O15484 640 aaPredicted RBP12.21□□□□□ -0.45
PRAME-213ENST00000492657 BCHEP06276 602 aa12.21□□□□□ -0.45
PRAME-213ENST00000492657 SPNP16150 400 aa12.21□□□□□ -0.45
PRAME-213ENST00000492657 GGT2P36268 569 aa12.21□□□□□ -0.45
PRAME-213ENST00000492657 FAM46CQ5VWP2 391 aa12.21□□□□□ -0.45
PRAME-213ENST00000492657 IKBIPQ70UQ0 350 aa12.21□□□□□ -0.45
PRAME-213ENST00000492657 GANCQ8TET4 914 aa12.21□□□□□ -0.45
PRAME-213ENST00000492657 TEX101Q9BY14 249 aa12.21□□□□□ -0.45
PRAME-213ENST00000492657 KLHL31Q9H511 634 aa12.21□□□□□ -0.45
PRAME-213ENST00000492657 WDR26Q9H7D7 661 aa12.21□□□□□ -0.45
PRAME-213ENST00000492657 SFXN1Q9H9B4 322 aa12.21□□□□□ -0.45
PRAME-213ENST00000492657 PELI2Q9HAT8 420 aa12.21□□□□□ -0.45
PRAME-213ENST00000492657 WASH6PQ9NQA3 447 aa12.21□□□□□ -0.45
PRAME-213ENST00000492657 YBX2Q9Y2T7 364 aaKnown RBP12.21□□□□□ -0.45
PRAME-213ENST00000492657 GON4LQ3T8J9 2241 aa12.21□□□□□ -0.45
PRAME-213ENST00000492657 GLOD5A6NK44 160 aa12.21□□□□□ -0.46
PRAME-213ENST00000492657 A8MV72 311 aaPredicted RBP12.21□□□□□ -0.46
PRAME-213ENST00000492657 FFAR1O14842 300 aa12.21□□□□□ -0.46
PRAME-213ENST00000492657 KMOO15229 486 aa12.21□□□□□ -0.46
PRAME-213ENST00000492657 SH3BP5O60239 455 aa12.21□□□□□ -0.46
PRAME-213ENST00000492657 MAT2AP31153 395 aaKnown RBP12.21□□□□□ -0.46
PRAME-213ENST00000492657 CSNK1G2P78368 415 aa12.21□□□□□ -0.46
PRAME-213ENST00000492657 REEP5Q00765 189 aa12.21□□□□□ -0.46
PRAME-213ENST00000492657 SYT16Q17RD7 645 aa12.21□□□□□ -0.46
PRAME-213ENST00000492657 SYT6Q5T7P8 510 aaPredicted RBP12.21□□□□□ -0.46
PRAME-213ENST00000492657 ATAD3BQ5T9A4 648 aa12.21□□□□□ -0.46
PRAME-213ENST00000492657 KIAA1211LQ6NV74 962 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms