RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 PTGES3Q15185 160 aaKnown RBP11.82□□□□□ -0.52
HMGN1-220ENST00000492280 GPR19Q15760 415 aa11.82□□□□□ -0.52
HMGN1-220ENST00000492280 TBC1D25Q3MII6 688 aa11.82□□□□□ -0.52
HMGN1-220ENST00000492280 METRNLQ641Q3 311 aa11.82□□□□□ -0.52
HMGN1-220ENST00000492280 ZNF765Q7L2R6 523 aa11.82□□□□□ -0.52
HMGN1-220ENST00000492280 RD3Q7Z3Z2 195 aa11.82□□□□□ -0.52
HMGN1-220ENST00000492280 C6orf120Q7Z4R8 191 aa11.82□□□□□ -0.52
HMGN1-220ENST00000492280 ADCK1Q86TW2 530 aa11.82□□□□□ -0.52
HMGN1-220ENST00000492280 FBXL6Q8N531 539 aa11.82□□□□□ -0.52
HMGN1-220ENST00000492280 IQCF1Q8N6M8 205 aa11.82□□□□□ -0.52
HMGN1-220ENST00000492280 XAGE5Q8WWM1 108 aa11.82□□□□□ -0.52
HMGN1-220ENST00000492280 COL21A1Q96P44 957 aa11.82□□□□□ -0.52
HMGN1-220ENST00000492280 ALPK1Q96QP1 1244 aa11.82□□□□□ -0.52
HMGN1-220ENST00000492280 AIF1LQ9BQI0 150 aa11.82□□□□□ -0.52
HMGN1-220ENST00000492280 TRMT61BQ9BVS5 477 aaKnown RBP11.82□□□□□ -0.52
HMGN1-220ENST00000492280 BTBD2Q9BX70 525 aa11.82□□□□□ -0.52
HMGN1-220ENST00000492280 EQTNQ9NQ60 294 aa11.82□□□□□ -0.52
HMGN1-220ENST00000492280 IMPAD1Q9NX62 359 aa11.82□□□□□ -0.52
HMGN1-220ENST00000492280 MS4A12Q9NXJ0 267 aa11.82□□□□□ -0.52
HMGN1-220ENST00000492280 ANGPT4Q9Y264 503 aa11.82□□□□□ -0.52
HMGN1-220ENST00000492280 TDRD6O60522 2096 aaKnown RBP11.82□□□□□ -0.52
HMGN1-220ENST00000492280 EPOPA6NHQ4 379 aa11.82□□□□□ -0.52
HMGN1-220ENST00000492280 H0Y8X5 98 aa11.82□□□□□ -0.52
HMGN1-220ENST00000492280 FRS3O43559 492 aa11.82□□□□□ -0.52
HMGN1-220ENST00000492280 OCM2P0CE71 109 aa11.82□□□□□ -0.52
HMGN1-220ENST00000492280 OCMP0CE72 109 aaPredicted RBP11.82□□□□□ -0.52
HMGN1-220ENST00000492280 RNF144AP50876 292 aaPredicted RBP11.82□□□□□ -0.52
HMGN1-220ENST00000492280 RUNX3Q13761 415 aa11.82□□□□□ -0.52
HMGN1-220ENST00000492280 SYT6Q5T7P8 510 aaPredicted RBP11.82□□□□□ -0.52
HMGN1-220ENST00000492280 UNC5DQ6UXZ4 953 aa11.82□□□□□ -0.52
HMGN1-220ENST00000492280 PRSS48Q7RTY5 328 aa11.82□□□□□ -0.52
HMGN1-220ENST00000492280 ZNF513Q8N8E2 541 aaPredicted RBP11.82□□□□□ -0.52
HMGN1-220ENST00000492280 PSD4Q8NDX1 1056 aa11.82□□□□□ -0.52
HMGN1-220ENST00000492280 GEMIN6Q8WXD5 167 aaKnown RBP11.82□□□□□ -0.52
HMGN1-220ENST00000492280 HERVK_113Q902F9 699 aa11.82□□□□□ -0.52
HMGN1-220ENST00000492280 CXorf40BQ96DE9 158 aa11.82□□□□□ -0.52
HMGN1-220ENST00000492280 METTL2AQ96IZ6 378 aaKnown RBP11.82□□□□□ -0.52
HMGN1-220ENST00000492280 PIP5K1AQ99755 562 aa11.82□□□□□ -0.52
HMGN1-220ENST00000492280 KLHL25Q9H0H3 589 aa11.82□□□□□ -0.52
HMGN1-220ENST00000492280 MIR1-1HGQ9H1L0 117 aa11.82□□□□□ -0.52
HMGN1-220ENST00000492280 OR51E2Q9H255 320 aa11.82□□□□□ -0.52
HMGN1-220ENST00000492280 SPHK1Q9NYA1 384 aa11.82□□□□□ -0.52
HMGN1-220ENST00000492280 FBXW2Q9UKT8 454 aa11.82□□□□□ -0.52
HMGN1-220ENST00000492280 YBX2Q9Y2T7 364 aaKnown RBP11.82□□□□□ -0.52
HMGN1-220ENST00000492280 FAM32AQ9Y421 112 aaKnown RBP11.82□□□□□ -0.52
HMGN1-220ENST00000492280 GPSM3Q9Y4H4 160 aa11.82□□□□□ -0.52
HMGN1-220ENST00000492280 HMGN4O00479 90 aa11.81□□□□□ -0.52
HMGN1-220ENST00000492280 DBTP11182 482 aaKnown RBP11.81□□□□□ -0.52
HMGN1-220ENST00000492280 MAGP20916 626 aa11.81□□□□□ -0.52
HMGN1-220ENST00000492280 ACVR2AP27037 513 aa11.81□□□□□ -0.52
HMGN1-220ENST00000492280 GDI1P31150 447 aa11.81□□□□□ -0.52
HMGN1-220ENST00000492280 GPC1P35052 558 aa11.81□□□□□ -0.52
HMGN1-220ENST00000492280 CCR8P51685 355 aa11.81□□□□□ -0.52
HMGN1-220ENST00000492280 CSNK1G2P78368 415 aa11.81□□□□□ -0.52
HMGN1-220ENST00000492280 FADDQ13158 208 aa11.81□□□□□ -0.52
HMGN1-220ENST00000492280 PIN1Q13526 163 aaPredicted RBP11.81□□□□□ -0.52
HMGN1-220ENST00000492280 DNASE1L3Q13609 305 aa11.81□□□□□ -0.52
HMGN1-220ENST00000492280 EIF4HQ15056 248 aaKnown RBP11.81□□□□□ -0.52
HMGN1-220ENST00000492280 DNAJC22Q8N4W6 341 aa11.81□□□□□ -0.52
HMGN1-220ENST00000492280 TMEM145Q8NBT3 493 aa11.81□□□□□ -0.52
HMGN1-220ENST00000492280 OR14C36Q8NHC7 312 aa11.81□□□□□ -0.52
HMGN1-220ENST00000492280 ARSGQ96EG1 525 aa11.81□□□□□ -0.52
HMGN1-220ENST00000492280 OR5M11Q96RB7 305 aa11.81□□□□□ -0.52
HMGN1-220ENST00000492280 DPH7Q9BTV6 452 aa11.81□□□□□ -0.52
HMGN1-220ENST00000492280 PBX4Q9BYU1 374 aa11.81□□□□□ -0.52
HMGN1-220ENST00000492280 TMEM38AQ9H6F2 299 aa11.81□□□□□ -0.52
HMGN1-220ENST00000492280 IRAK4Q9NWZ3 460 aa11.81□□□□□ -0.52
HMGN1-220ENST00000492280 SCHIP1Q9P0W5 487 aaPredicted RBP11.81□□□□□ -0.52
HMGN1-220ENST00000492280 THAP10Q9P2Z0 257 aaPredicted RBP11.81□□□□□ -0.52
HMGN1-220ENST00000492280 DENND4AQ7Z401 1863 aa11.81□□□□□ -0.52
HMGN1-220ENST00000492280 PGRMC2O15173 223 aa11.81□□□□□ -0.52
HMGN1-220ENST00000492280 SLC28A2O43868 658 aa11.81□□□□□ -0.52
HMGN1-220ENST00000492280 APOL3O95236 402 aa11.81□□□□□ -0.52
HMGN1-220ENST00000492280 IFNW1P05000 195 aa11.81□□□□□ -0.52
HMGN1-220ENST00000492280 UQCRC2P22695 453 aa11.81□□□□□ -0.52
HMGN1-220ENST00000492280 CNR2P34972 360 aa11.81□□□□□ -0.52
HMGN1-220ENST00000492280 BCL6P41182 706 aa11.81□□□□□ -0.52
HMGN1-220ENST00000492280 MAPK9P45984 424 aa11.81□□□□□ -0.52
HMGN1-220ENST00000492280 CLDN2P57739 230 aa11.81□□□□□ -0.52
HMGN1-220ENST00000492280 ST3GAL4Q11206 333 aa11.81□□□□□ -0.52
HMGN1-220ENST00000492280 KRT33BQ14525 404 aa11.81□□□□□ -0.52
HMGN1-220ENST00000492280 TIGD6Q17RP2 521 aa11.81□□□□□ -0.52
HMGN1-220ENST00000492280 ZNF630Q2M218 657 aaPredicted RBP11.81□□□□□ -0.52
HMGN1-220ENST00000492280 REEP3Q6NUK4 255 aa11.81□□□□□ -0.52
HMGN1-220ENST00000492280 PARM1Q6UWI2 310 aa11.81□□□□□ -0.52
HMGN1-220ENST00000492280 PAGE2Q7Z2X7 111 aa11.81□□□□□ -0.52
HMGN1-220ENST00000492280 B3GNT7Q8NFL0 401 aa11.81□□□□□ -0.52
HMGN1-220ENST00000492280 LGALS12Q96DT0 336 aa11.81□□□□□ -0.52
HMGN1-220ENST00000492280 SIGLEC11Q96RL6 698 aa11.81□□□□□ -0.52
HMGN1-220ENST00000492280 DNAAF2Q9NVR5 837 aaKnown RBP11.81□□□□□ -0.52
HMGN1-220ENST00000492280 DNAJC27Q9NZQ0 273 aa11.81□□□□□ -0.52
HMGN1-220ENST00000492280 LMCD1Q9NZU5 365 aa11.81□□□□□ -0.52
HMGN1-220ENST00000492280 EFCAB9A8MZ26 197 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 AGRPO00253 132 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 HAT1O14929 419 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 CAPN5O15484 640 aaPredicted RBP11.8□□□□□ -0.52
HMGN1-220ENST00000492280 ERI3O43414 337 aaKnown RBP11.8□□□□□ -0.52
HMGN1-220ENST00000492280 OR10H3O60404 316 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 CCNB2O95067 398 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 KRT75O95678 551 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms