RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 CENPEQ02224 2701 aa8.23□□□□□ -1.09
HDAC3-211ENST00000491581 A0A096LPK6 155 aa8.23□□□□□ -1.09
HDAC3-211ENST00000491581 ATP6AP2A0A1C7CYW4 349 aa8.23□□□□□ -1.09
HDAC3-211ENST00000491581 PGRMC2O15173 223 aa8.23□□□□□ -1.09
HDAC3-211ENST00000491581 EIF3HO15372 352 aaKnown RBP eCLIP8.23□□□□□ -1.09
HDAC3-211ENST00000491581 ATP6AP2O75787 350 aa8.23□□□□□ -1.09
HDAC3-211ENST00000491581 ACSL3O95573 720 aa8.23□□□□□ -1.09
HDAC3-211ENST00000491581 SSTR4P31391 388 aa8.23□□□□□ -1.09
HDAC3-211ENST00000491581 BSGP35613 385 aa8.23□□□□□ -1.09
HDAC3-211ENST00000491581 TRPC1P48995 793 aa8.23□□□□□ -1.09
HDAC3-211ENST00000491581 CASP6P55212 293 aa8.23□□□□□ -1.09
HDAC3-211ENST00000491581 ETF1P62495 437 aaKnown RBP8.23□□□□□ -1.09
HDAC3-211ENST00000491581 HERVK_113P63132 956 aa8.23□□□□□ -1.09
HDAC3-211ENST00000491581 ERVK-8P63133 956 aa8.23□□□□□ -1.09
HDAC3-211ENST00000491581 SKP1P63208 163 aa8.23□□□□□ -1.09
HDAC3-211ENST00000491581 DUSP2Q05923 314 aa8.23□□□□□ -1.09
HDAC3-211ENST00000491581 PMPCAQ10713 525 aa8.23□□□□□ -1.09
HDAC3-211ENST00000491581 E2F2Q14209 437 aa8.23□□□□□ -1.09
HDAC3-211ENST00000491581 SETDB1Q15047 1291 aa8.23□□□□□ -1.09
HDAC3-211ENST00000491581 NNATQ16517 81 aa8.23□□□□□ -1.09
HDAC3-211ENST00000491581 SGO1Q5FBB7 561 aa8.23□□□□□ -1.09
HDAC3-211ENST00000491581 TECRLQ5HYJ1 363 aa8.23□□□□□ -1.09
HDAC3-211ENST00000491581 TCHHL1Q5QJ38 904 aaPredicted RBP8.23□□□□□ -1.09
HDAC3-211ENST00000491581 DEPDC1Q5TB30 811 aa8.23□□□□□ -1.09
HDAC3-211ENST00000491581 RTL6Q6ICC9 239 aa8.23□□□□□ -1.09
HDAC3-211ENST00000491581 OR4C11Q6IEV9 310 aa8.23□□□□□ -1.09
HDAC3-211ENST00000491581 GRHL2Q6ISB3 625 aa8.23□□□□□ -1.09
HDAC3-211ENST00000491581 ZNF585AQ6P3V2 769 aa8.23□□□□□ -1.09
HDAC3-211ENST00000491581 PLXDC2Q6UX71 529 aa8.23□□□□□ -1.09
HDAC3-211ENST00000491581 HSDL2Q6YN16 418 aa8.23□□□□□ -1.09
HDAC3-211ENST00000491581 TBC1D1Q86TI0 1168 aaPredicted RBP8.23□□□□□ -1.09
HDAC3-211ENST00000491581 PRR22Q8IZ63 422 aa8.23□□□□□ -1.09
HDAC3-211ENST00000491581 TCAIMQ8N3R3 496 aa8.23□□□□□ -1.09
HDAC3-211ENST00000491581 HORMAD2Q8N7B1 307 aa8.23□□□□□ -1.09
HDAC3-211ENST00000491581 BBOF1Q8ND07 529 aa8.23□□□□□ -1.09
HDAC3-211ENST00000491581 STAG3L4Q8TBR4 150 aa8.23□□□□□ -1.09
HDAC3-211ENST00000491581 UBTD2Q8WUN7 234 aa8.23□□□□□ -1.09
HDAC3-211ENST00000491581 PHF21BQ96EK2 531 aa8.23□□□□□ -1.09
HDAC3-211ENST00000491581 SEC16BQ96JE7 1060 aa8.23□□□□□ -1.09
HDAC3-211ENST00000491581 C16orf45Q96MC5 204 aaPredicted RBP8.23□□□□□ -1.09
HDAC3-211ENST00000491581 KCNC2Q96PR1 638 aa8.23□□□□□ -1.09
HDAC3-211ENST00000491581 GAL3ST4Q96RP7 486 aa8.23□□□□□ -1.09
HDAC3-211ENST00000491581 CCDC77Q9BR77 488 aa8.23□□□□□ -1.09
HDAC3-211ENST00000491581 EFCAB11Q9BUY7 163 aa8.23□□□□□ -1.09
HDAC3-211ENST00000491581 ERVK-6Q9BXR3 956 aa8.23□□□□□ -1.09
HDAC3-211ENST00000491581 SLC6A15Q9H2J7 730 aa8.23□□□□□ -1.09
HDAC3-211ENST00000491581 EHD1Q9H4M9 534 aa8.23□□□□□ -1.09
HDAC3-211ENST00000491581 CNOT10Q9H9A5 744 aaKnown RBP8.23□□□□□ -1.09
HDAC3-211ENST00000491581 ANKRA2Q9H9E1 313 aa8.23□□□□□ -1.09
HDAC3-211ENST00000491581 ZBTB26Q9HCK0 441 aa8.23□□□□□ -1.09
HDAC3-211ENST00000491581 ERVK-19Q9WJR5 959 aa8.23□□□□□ -1.09
HDAC3-211ENST00000491581 DTX4Q9Y2E6 619 aa8.23□□□□□ -1.09
HDAC3-211ENST00000491581 YARS2Q9Y2Z4 477 aaKnown RBP8.23□□□□□ -1.09
HDAC3-211ENST00000491581 ASB4Q9Y574 426 aa8.23□□□□□ -1.09
HDAC3-211ENST00000491581 KLF2Q9Y5W3 355 aaPredicted RBP8.23□□□□□ -1.09
HDAC3-211ENST00000491581 AKAP9Q99996 3911 aa8.22□□□□□ -1.09
HDAC3-211ENST00000491581 NINQ8N4C6 2090 aa8.22□□□□□ -1.09
HDAC3-211ENST00000491581 C2orf72A6NCS6 295 aa8.22□□□□□ -1.09
HDAC3-211ENST00000491581 C17orf51A8MQB3 221 aa8.22□□□□□ -1.09
HDAC3-211ENST00000491581 KLRC4-KLRK1H3BQV0 150 aa8.22□□□□□ -1.09
HDAC3-211ENST00000491581 PRRG2O14669 202 aa8.22□□□□□ -1.09
HDAC3-211ENST00000491581 GLSO94925 669 aaPredicted RBP8.22□□□□□ -1.09
HDAC3-211ENST00000491581 AIFM1O95831 613 aa8.22□□□□□ -1.09
HDAC3-211ENST00000491581 TUBB4AP04350 444 aa8.22□□□□□ -1.09
HDAC3-211ENST00000491581 IGKV3-11P04433 115 aa8.22□□□□□ -1.09
HDAC3-211ENST00000491581 SBK3P0C264 359 aa8.22□□□□□ -1.09
HDAC3-211ENST00000491581 MYBL2P10244 700 aa8.22□□□□□ -1.09
HDAC3-211ENST00000491581 GFAPP14136 432 aa8.22□□□□□ -1.09
HDAC3-211ENST00000491581 ECHS1P30084 290 aa8.22□□□□□ -1.09
HDAC3-211ENST00000491581 SOX18P35713 384 aa8.22□□□□□ -1.09
HDAC3-211ENST00000491581 ADH7P40394 386 aa8.22□□□□□ -1.09
HDAC3-211ENST00000491581 CASP2P42575 452 aa8.22□□□□□ -1.09
HDAC3-211ENST00000491581 RAP1GDS1P52306 607 aa8.22□□□□□ -1.09
HDAC3-211ENST00000491581 CDH13P55290 713 aa8.22□□□□□ -1.09
HDAC3-211ENST00000491581 TNFRSF17Q02223 184 aa8.22□□□□□ -1.09
HDAC3-211ENST00000491581 FOXO1Q12778 655 aa8.22□□□□□ -1.09
HDAC3-211ENST00000491581 GTF2H2Q13888 395 aa8.22□□□□□ -1.09
HDAC3-211ENST00000491581 ZNF267Q14586 743 aaPredicted RBP8.22□□□□□ -1.09
HDAC3-211ENST00000491581 TBCCQ15814 346 aa8.22□□□□□ -1.09
HDAC3-211ENST00000491581 AP5B1Q2VPB7 878 aa8.22□□□□□ -1.09
HDAC3-211ENST00000491581 GXYLT1Q4G148 440 aa8.22□□□□□ -1.09
HDAC3-211ENST00000491581 GTF2H2CQ6P1K8 395 aa8.22□□□□□ -1.09
HDAC3-211ENST00000491581 XKRXQ6PP77 449 aa8.22□□□□□ -1.09
HDAC3-211ENST00000491581 RPTNQ6XPR3 784 aa8.22□□□□□ -1.09
HDAC3-211ENST00000491581 MEX3BQ6ZN04 569 aaKnown RBP8.22□□□□□ -1.09
HDAC3-211ENST00000491581 FAM47EQ6ZV65 393 aa8.22□□□□□ -1.09
HDAC3-211ENST00000491581 MAATS1Q7Z4T9 603 aa8.22□□□□□ -1.09
HDAC3-211ENST00000491581 SLC34A3Q8N130 599 aa8.22□□□□□ -1.09
HDAC3-211ENST00000491581 TMEM132CQ8N3T6 1108 aa8.22□□□□□ -1.09
HDAC3-211ENST00000491581 PTGR2Q8N8N7 351 aaPredicted RBP8.22□□□□□ -1.09
HDAC3-211ENST00000491581 MORN4Q8NDC4 146 aa8.22□□□□□ -1.09
HDAC3-211ENST00000491581 TTLQ8NG68 377 aa8.22□□□□□ -1.09
HDAC3-211ENST00000491581 OR10G3Q8NGC4 313 aa8.22□□□□□ -1.09
HDAC3-211ENST00000491581 SENP5Q96HI0 755 aaPredicted RBP8.22□□□□□ -1.09
HDAC3-211ENST00000491581 TBCDQ9BTW9 1192 aa8.22□□□□□ -1.09
HDAC3-211ENST00000491581 MRPL1Q9BYD6 325 aaKnown RBP8.22□□□□□ -1.09
HDAC3-211ENST00000491581 PHACTR1Q9C0D0 580 aa8.22□□□□□ -1.09
HDAC3-211ENST00000491581 CDC42EP4Q9H3Q1 356 aaKnown RBP8.22□□□□□ -1.09
HDAC3-211ENST00000491581 RPF2Q9H7B2 306 aaKnown RBP8.22□□□□□ -1.09
HDAC3-211ENST00000491581 NOL11Q9H8H0 719 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms