RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 STX4Q12846 297 aa12.46□□□□□ -0.41
SNX12-205ENST00000490561 SLC13A2Q13183 592 aa12.46□□□□□ -0.41
SNX12-205ENST00000490561 MLC1Q15049 377 aa12.46□□□□□ -0.41
SNX12-205ENST00000490561 CEBPEQ15744 281 aa12.46□□□□□ -0.41
SNX12-205ENST00000490561 MAPKAPK3Q16644 382 aa12.46□□□□□ -0.41
SNX12-205ENST00000490561 SYT16Q17RD7 645 aa12.46□□□□□ -0.41
SNX12-205ENST00000490561 MMEL1Q495T6 779 aa12.46□□□□□ -0.41
SNX12-205ENST00000490561 TIGD2Q4W5G0 525 aa12.46□□□□□ -0.41
SNX12-205ENST00000490561 MRPL14Q6P1L8 145 aaKnown RBP12.46□□□□□ -0.41
SNX12-205ENST00000490561 FAM198BQ6UWH4 519 aa12.46□□□□□ -0.41
SNX12-205ENST00000490561 C6orf89Q6UWU4 347 aa12.46□□□□□ -0.41
SNX12-205ENST00000490561 SNX32Q86XE0 403 aa12.46□□□□□ -0.41
SNX12-205ENST00000490561 TREML1Q86YW5 311 aa12.46□□□□□ -0.41
SNX12-205ENST00000490561 SCUBE1Q8IWY4 988 aa12.46□□□□□ -0.41
SNX12-205ENST00000490561 DTWD1Q8N5C7 304 aa12.46□□□□□ -0.41
SNX12-205ENST00000490561 PLPP5Q8NEB5 264 aa12.46□□□□□ -0.41
SNX12-205ENST00000490561 STT3BQ8TCJ2 826 aa12.46□□□□□ -0.41
SNX12-205ENST00000490561 OR5P2Q8WZ92 322 aa12.46□□□□□ -0.41
SNX12-205ENST00000490561 EXOSC8Q96B26 276 aaKnown RBP12.46□□□□□ -0.41
SNX12-205ENST00000490561 NSL1Q96IY1 281 aa12.46□□□□□ -0.41
SNX12-205ENST00000490561 ITCHQ96J02 903 aa12.46□□□□□ -0.41
SNX12-205ENST00000490561 ZNF578Q96N58 590 aaPredicted RBP12.46□□□□□ -0.41
SNX12-205ENST00000490561 OR52E6Q96RD3 313 aa12.46□□□□□ -0.41
SNX12-205ENST00000490561 CHST8Q9H2A9 424 aa12.46□□□□□ -0.41
SNX12-205ENST00000490561 NEUROD4Q9HD90 331 aa12.46□□□□□ -0.41
SNX12-205ENST00000490561 LANCL2Q9NS86 450 aa12.46□□□□□ -0.41
SNX12-205ENST00000490561 SLC22A11Q9NSA0 550 aa12.46□□□□□ -0.41
SNX12-205ENST00000490561 BTNL2Q9UIR0 455 aa12.46□□□□□ -0.41
SNX12-205ENST00000490561 PCDHGB4Q9UN71 923 aa12.46□□□□□ -0.41
SNX12-205ENST00000490561 PIEZO1Q92508 2521 aa12.45□□□□□ -0.42
SNX12-205ENST00000490561 GLOD5A6NK44 160 aa12.45□□□□□ -0.42
SNX12-205ENST00000490561 MYO1GB0I1T2 1018 aa12.45□□□□□ -0.42
SNX12-205ENST00000490561 C21orf140B9A014 251 aa12.45□□□□□ -0.42
SNX12-205ENST00000490561 FAM227AF5H4B4 570 aa12.45□□□□□ -0.42
SNX12-205ENST00000490561 RRP9O43818 475 aaKnown RBP12.45□□□□□ -0.42
SNX12-205ENST00000490561 RAD1O60671 282 aa12.45□□□□□ -0.42
SNX12-205ENST00000490561 B4GALT2O60909 372 aa12.45□□□□□ -0.42
SNX12-205ENST00000490561 ERAL1O75616 437 aaKnown RBP12.45□□□□□ -0.42
SNX12-205ENST00000490561 NPPAP01160 153 aa12.45□□□□□ -0.42
SNX12-205ENST00000490561 IGHEP01854 428 aa12.45□□□□□ -0.42
SNX12-205ENST00000490561 IFI6P09912 130 aa12.45□□□□□ -0.42
SNX12-205ENST00000490561 ESRRAP11474 423 aaPredicted RBP12.45□□□□□ -0.42
SNX12-205ENST00000490561 PORP16435 677 aaPredicted RBP12.45□□□□□ -0.42
SNX12-205ENST00000490561 GALNSP34059 522 aa12.45□□□□□ -0.42
SNX12-205ENST00000490561 FRKP42685 505 aaPredicted RBP12.45□□□□□ -0.42
SNX12-205ENST00000490561 ID4P47928 161 aa12.45□□□□□ -0.42
SNX12-205ENST00000490561 TRPC1P48995 793 aa12.45□□□□□ -0.42
SNX12-205ENST00000490561 XKP51811 444 aa12.45□□□□□ -0.42
SNX12-205ENST00000490561 PCBP4P57723 403 aaKnown RBP12.45□□□□□ -0.42
SNX12-205ENST00000490561 IGLV3-21P80748 117 aaPredicted RBP12.45□□□□□ -0.42
SNX12-205ENST00000490561 FOLH1Q04609 750 aa12.45□□□□□ -0.42
SNX12-205ENST00000490561 FOXC1Q12948 553 aa12.45□□□□□ -0.42
SNX12-205ENST00000490561 CAMK2BQ13554 666 aa12.45□□□□□ -0.42
SNX12-205ENST00000490561 NCF4Q15080 339 aa12.45□□□□□ -0.42
SNX12-205ENST00000490561 NKG7Q16617 165 aa12.45□□□□□ -0.42
SNX12-205ENST00000490561 MINDY4Q4G0A6 757 aa12.45□□□□□ -0.42
SNX12-205ENST00000490561 VPS26BQ4G0F5 336 aa12.45□□□□□ -0.42
SNX12-205ENST00000490561 C6orf163Q5TEZ5 329 aa12.45□□□□□ -0.42
SNX12-205ENST00000490561 MFSD4BQ5TF39 518 aa12.45□□□□□ -0.42
SNX12-205ENST00000490561 MLIPQ5VWP3 458 aa12.45□□□□□ -0.42
SNX12-205ENST00000490561 OR4F3Q6IEY1 312 aa12.45□□□□□ -0.42
SNX12-205ENST00000490561 CCDC121Q6ZUS5 278 aa12.45□□□□□ -0.42
SNX12-205ENST00000490561 MMP21Q8N119 569 aa12.45□□□□□ -0.42
SNX12-205ENST00000490561 LRRC25Q8N386 305 aaPredicted RBP12.45□□□□□ -0.42
SNX12-205ENST00000490561 DPP10Q8N608 796 aa12.45□□□□□ -0.42
SNX12-205ENST00000490561 CCDC115Q96NT0 180 aa12.45□□□□□ -0.42
SNX12-205ENST00000490561 GPR87Q9BY21 358 aa12.45□□□□□ -0.42
SNX12-205ENST00000490561 EFCAB1Q9HAE3 211 aa12.45□□□□□ -0.42
SNX12-205ENST00000490561 GID8Q9NWU2 228 aa12.45□□□□□ -0.42
SNX12-205ENST00000490561 NDE1Q9NXR1 346 aa12.45□□□□□ -0.42
SNX12-205ENST00000490561 CTSFQ9UBX1 484 aa12.45□□□□□ -0.42
SNX12-205ENST00000490561 C19orf25Q9UFG5 118 aaPredicted RBP12.45□□□□□ -0.42
SNX12-205ENST00000490561 MAN2B2Q9Y2E5 1009 aa12.45□□□□□ -0.42
SNX12-205ENST00000490561 NEUROG3Q9Y4Z2 214 aa12.45□□□□□ -0.42
SNX12-205ENST00000490561 LOC100653049A0A140TA62 436 aa12.44□□□□□ -0.42
SNX12-205ENST00000490561 A0A1W2PRB8 838 aa12.44□□□□□ -0.42
SNX12-205ENST00000490561 DYRK3O43781 588 aa12.44□□□□□ -0.42
SNX12-205ENST00000490561 FGF17O60258 216 aa12.44□□□□□ -0.42
SNX12-205ENST00000490561 ERN1O75460 977 aaKnown RBP12.44□□□□□ -0.42
SNX12-205ENST00000490561 PRKRAO75569 313 aaKnown RBP12.44□□□□□ -0.42
SNX12-205ENST00000490561 KRT34O76011 436 aa12.44□□□□□ -0.42
SNX12-205ENST00000490561 HEXBP07686 556 aa12.44□□□□□ -0.42
SNX12-205ENST00000490561 SLC35E2P0CK97 266 aa12.44□□□□□ -0.42
SNX12-205ENST00000490561 CPMP14384 443 aa12.44□□□□□ -0.42
SNX12-205ENST00000490561 CAPN3P20807 821 aa12.44□□□□□ -0.42
SNX12-205ENST00000490561 DGKQP52824 942 aa12.44□□□□□ -0.42
SNX12-205ENST00000490561 MANFP55145 182 aaKnown RBP12.44□□□□□ -0.42
SNX12-205ENST00000490561 RPS15P62841 145 aaKnown RBP12.44□□□□□ -0.42
SNX12-205ENST00000490561 PLIN5Q00G26 463 aa12.44□□□□□ -0.42
SNX12-205ENST00000490561 RHAGQ02094 409 aa12.44□□□□□ -0.42
SNX12-205ENST00000490561 ZNF385BQ569K4 471 aa12.44□□□□□ -0.42
SNX12-205ENST00000490561 VWA2Q5GFL6 755 aa12.44□□□□□ -0.42
SNX12-205ENST00000490561 REP15Q6BDI9 236 aa12.44□□□□□ -0.42
SNX12-205ENST00000490561 ANKRD26P1Q6NSI1 321 aa12.44□□□□□ -0.42
SNX12-205ENST00000490561 ST13P4Q8IZP2 240 aaPredicted RBP12.44□□□□□ -0.42
SNX12-205ENST00000490561 TRIML2Q8N7C3 387 aa12.44□□□□□ -0.42
SNX12-205ENST00000490561 TMEM52Q8NDY8 209 aa12.44□□□□□ -0.42
SNX12-205ENST00000490561 METTL21AQ8WXB1 218 aa12.44□□□□□ -0.42
SNX12-205ENST00000490561 VPS33AQ96AX1 596 aa12.44□□□□□ -0.42
SNX12-205ENST00000490561 ANKRD9Q96BM1 317 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms