RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 STAG3L4Q8TBR4 150 aa16.44■□□□□ 0.22
YIPF3-208ENST00000490447 ZNF721Q8TF20 911 aa16.44■□□□□ 0.22
YIPF3-208ENST00000490447 ZNF473Q8WTR7 871 aaKnown RBP16.44■□□□□ 0.22
YIPF3-208ENST00000490447 CMTM7Q96FZ5 175 aa16.44■□□□□ 0.22
YIPF3-208ENST00000490447 RBM18Q96H35 190 aaKnown RBP16.44■□□□□ 0.22
YIPF3-208ENST00000490447 NAPGQ99747 312 aaPredicted RBP16.44■□□□□ 0.22
YIPF3-208ENST00000490447 SAYSD1Q9NPB0 183 aa16.44■□□□□ 0.22
YIPF3-208ENST00000490447 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.44■□□□□ 0.22
YIPF3-208ENST00000490447 MS4A12Q9NXJ0 267 aa16.44■□□□□ 0.22
YIPF3-208ENST00000490447 ALKBH4Q9NXW9 302 aa16.44■□□□□ 0.22
YIPF3-208ENST00000490447 TUBA8Q9NY65 449 aaPredicted RBP16.44■□□□□ 0.22
YIPF3-208ENST00000490447 OPTCQ9UBM4 332 aa16.44■□□□□ 0.22
YIPF3-208ENST00000490447 TNFRSF10DQ9UBN6 386 aa16.44■□□□□ 0.22
YIPF3-208ENST00000490447 ATG4BQ9Y4P1 393 aa16.44■□□□□ 0.22
YIPF3-208ENST00000490447 CXorf49A8MYA2 514 aaPredicted RBP16.43■□□□□ 0.22
YIPF3-208ENST00000490447 SUPT3HB4E1H0 165 aa16.43■□□□□ 0.22
YIPF3-208ENST00000490447 SAP18O00422 153 aaKnown RBP16.43■□□□□ 0.22
YIPF3-208ENST00000490447 KLK8O60259 260 aa16.43■□□□□ 0.22
YIPF3-208ENST00000490447 SUPT3HO75486 399 aa16.43■□□□□ 0.22
YIPF3-208ENST00000490447 SCELO95171 688 aa16.43■□□□□ 0.22
YIPF3-208ENST00000490447 SPRP35270 261 aaPredicted RBP16.43■□□□□ 0.22
YIPF3-208ENST00000490447 KCNJ2P63252 427 aa16.43■□□□□ 0.22
YIPF3-208ENST00000490447 PLIN5Q00G26 463 aa16.43■□□□□ 0.22
YIPF3-208ENST00000490447 TBL3Q12788 808 aaKnown RBP16.43■□□□□ 0.22
YIPF3-208ENST00000490447 BIKQ13323 160 aa16.43■□□□□ 0.22
YIPF3-208ENST00000490447 HYAL4Q2M3T9 481 aa16.43■□□□□ 0.22
YIPF3-208ENST00000490447 PIGGQ5H8A4 983 aa16.43■□□□□ 0.22
YIPF3-208ENST00000490447 SLC22A10Q63ZE4 541 aa16.43■□□□□ 0.22
YIPF3-208ENST00000490447 OR4N5Q8IXE1 308 aa16.43■□□□□ 0.22
YIPF3-208ENST00000490447 ANKRD9Q96BM1 317 aaPredicted RBP16.43■□□□□ 0.22
YIPF3-208ENST00000490447 ALG9Q9H6U8 611 aa16.43■□□□□ 0.22
YIPF3-208ENST00000490447 RPF2Q9H7B2 306 aaKnown RBP16.43■□□□□ 0.22
YIPF3-208ENST00000490447 NUDT4Q9NZJ9 180 aa16.43■□□□□ 0.22
YIPF3-208ENST00000490447 BOKQ9UMX3 212 aaPredicted RBP16.43■□□□□ 0.22
YIPF3-208ENST00000490447 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.43■□□□□ 0.22
YIPF3-208ENST00000490447 TRGV5A0A0B4J1U4 118 aa16.42■□□□□ 0.22
YIPF3-208ENST00000490447 TCRBV9S1A1TA0A576 114 aa16.42■□□□□ 0.22
YIPF3-208ENST00000490447 K7EPI3 171 aa16.42■□□□□ 0.22
YIPF3-208ENST00000490447 EIF3HO15372 352 aaKnown RBP eCLIP16.42■□□□□ 0.22
YIPF3-208ENST00000490447 FGF17O60258 216 aa16.42■□□□□ 0.22
YIPF3-208ENST00000490447 HCN1O60741 890 aa16.42■□□□□ 0.22
YIPF3-208ENST00000490447 ZNF354AO60765 605 aaPredicted RBP16.42■□□□□ 0.22
YIPF3-208ENST00000490447 CELA3AP09093 270 aa16.42■□□□□ 0.22
YIPF3-208ENST00000490447 GLI4P10075 376 aa16.42■□□□□ 0.22
YIPF3-208ENST00000490447 GABRA1P14867 456 aa16.42■□□□□ 0.22
YIPF3-208ENST00000490447 EPORP19235 508 aa16.42■□□□□ 0.22
YIPF3-208ENST00000490447 TLX1P31314 330 aaPredicted RBP16.42■□□□□ 0.22
YIPF3-208ENST00000490447 PIGAP37287 484 aa16.42■□□□□ 0.22
YIPF3-208ENST00000490447 CASP2P42575 452 aa16.42■□□□□ 0.22
YIPF3-208ENST00000490447 ART1P52961 327 aa16.42■□□□□ 0.22
YIPF3-208ENST00000490447 SLAMF1Q13291 335 aa16.42■□□□□ 0.22
YIPF3-208ENST00000490447 DDX39BQ13838 428 aaKnown RBP16.42■□□□□ 0.22
YIPF3-208ENST00000490447 SLMAPQ14BN4 828 aa16.42■□□□□ 0.22
YIPF3-208ENST00000490447 ZKSCAN8Q15776 578 aaPredicted RBP16.42■□□□□ 0.22
YIPF3-208ENST00000490447 C1orf185Q5T7R7 199 aa16.42■□□□□ 0.22
YIPF3-208ENST00000490447 KHDRBS2Q5VWX1 349 aaKnown RBP16.42■□□□□ 0.22
YIPF3-208ENST00000490447 OR4C11Q6IEV9 310 aa16.42■□□□□ 0.22
YIPF3-208ENST00000490447 SLC29A4Q7RTT9 530 aa16.42■□□□□ 0.22
YIPF3-208ENST00000490447 TBC1D1Q86TI0 1168 aaPredicted RBP16.42■□□□□ 0.22
YIPF3-208ENST00000490447 MYLK4Q86YV6 388 aaPredicted RBP16.42■□□□□ 0.22
YIPF3-208ENST00000490447 C9orf40Q8IXQ3 194 aa16.42■□□□□ 0.22
YIPF3-208ENST00000490447 LAS2Q8IYD9 372 aa16.42■□□□□ 0.22
YIPF3-208ENST00000490447 OR7G3Q8NG95 312 aa16.42■□□□□ 0.22
YIPF3-208ENST00000490447 TANKQ92844 425 aa16.42■□□□□ 0.22
YIPF3-208ENST00000490447 PPWD1Q96BP3 646 aaKnown RBP16.42■□□□□ 0.22
YIPF3-208ENST00000490447 SENP5Q96HI0 755 aaPredicted RBP16.42■□□□□ 0.22
YIPF3-208ENST00000490447 UBXN10Q96LJ8 280 aa16.42■□□□□ 0.22
YIPF3-208ENST00000490447 DPH5Q9H2P9 285 aa16.42■□□□□ 0.22
YIPF3-208ENST00000490447 ADGRE2Q9UHX3 823 aa16.42■□□□□ 0.22
YIPF3-208ENST00000490447 PHF11Q9UIL8 331 aa16.42■□□□□ 0.22
YIPF3-208ENST00000490447 FAM215AQ9Y5M1 114 aa16.42■□□□□ 0.22
YIPF3-208ENST00000490447 A0A0G2JNJ9 132 aa16.41■□□□□ 0.22
YIPF3-208ENST00000490447 EPB42P16452 691 aa16.41■□□□□ 0.22
YIPF3-208ENST00000490447 DEKP35659 375 aaKnown RBP16.41■□□□□ 0.22
YIPF3-208ENST00000490447 BUD31P41223 144 aaPredicted RBP16.41■□□□□ 0.22
YIPF3-208ENST00000490447 PHEXP78562 749 aa16.41■□□□□ 0.22
YIPF3-208ENST00000490447 FOLH1Q04609 750 aa16.41■□□□□ 0.22
YIPF3-208ENST00000490447 FOXO1Q12778 655 aa16.41■□□□□ 0.22
YIPF3-208ENST00000490447 CBLBQ13191 982 aa16.41■□□□□ 0.22
YIPF3-208ENST00000490447 E2F2Q14209 437 aa16.41■□□□□ 0.22
YIPF3-208ENST00000490447 GRTP1Q5TC63 336 aa16.41■□□□□ 0.22
YIPF3-208ENST00000490447 PRAMEF20Q5VT98 475 aa16.41■□□□□ 0.22
YIPF3-208ENST00000490447 C3orf62Q6ZUJ4 267 aa16.41■□□□□ 0.22
YIPF3-208ENST00000490447 WDR53Q7Z5U6 358 aaPredicted RBP16.41■□□□□ 0.22
YIPF3-208ENST00000490447 DND1Q8IYX4 353 aaKnown RBP16.41■□□□□ 0.22
YIPF3-208ENST00000490447 LIX1Q8N485 282 aa16.41■□□□□ 0.22
YIPF3-208ENST00000490447 SLC15A4Q8N697 577 aa16.41■□□□□ 0.22
YIPF3-208ENST00000490447 FAM13CQ8NE31 585 aa16.41■□□□□ 0.22
YIPF3-208ENST00000490447 RGMAQ96B86 450 aa16.41■□□□□ 0.22
YIPF3-208ENST00000490447 SPACA9Q96E40 222 aaPredicted RBP16.41■□□□□ 0.22
YIPF3-208ENST00000490447 FBXL20Q96IG2 436 aa16.41■□□□□ 0.22
YIPF3-208ENST00000490447 GAL3ST4Q96RP7 486 aa16.41■□□□□ 0.22
YIPF3-208ENST00000490447 CNPPD1Q9BV87 410 aa16.41■□□□□ 0.22
YIPF3-208ENST00000490447 OR51B5Q9H339 312 aa16.41■□□□□ 0.22
YIPF3-208ENST00000490447 KCNF1Q9H3M0 494 aa16.41■□□□□ 0.22
YIPF3-208ENST00000490447 NMRAL1Q9HBL8 299 aa16.41■□□□□ 0.22
YIPF3-208ENST00000490447 RNF14Q9UBS8 474 aa16.41■□□□□ 0.22
YIPF3-208ENST00000490447 B4GALT7Q9UBV7 327 aa16.41■□□□□ 0.22
YIPF3-208ENST00000490447 Q9UFV3 132 aa16.41■□□□□ 0.22
YIPF3-208ENST00000490447 ANGPTL3Q9Y5C1 460 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms