RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 SLC12A4Q9UP95 1085 aa16.87■□□□□ 0.29
COL9A3-214ENST00000490398 CLCA3PQ9Y6N3 262 aa16.87■□□□□ 0.29
COL9A3-214ENST00000490398 CYSRT1A8MQ03 144 aa16.86■□□□□ 0.29
COL9A3-214ENST00000490398 ESPNB1AK53 854 aa16.86■□□□□ 0.29
COL9A3-214ENST00000490398 SEMA3DO95025 777 aa16.86■□□□□ 0.29
COL9A3-214ENST00000490398 KRT4P19013 534 aa16.86■□□□□ 0.29
COL9A3-214ENST00000490398 TNNI3P19429 210 aa16.86■□□□□ 0.29
COL9A3-214ENST00000490398 STT3AP46977 705 aa16.86■□□□□ 0.29
COL9A3-214ENST00000490398 FOXA1P55317 472 aa16.86■□□□□ 0.29
COL9A3-214ENST00000490398 RASA2Q15283 850 aa16.86■□□□□ 0.29
COL9A3-214ENST00000490398 ERCC6LQ2NKX8 1250 aa16.86■□□□□ 0.29
COL9A3-214ENST00000490398 CYP20A1Q6UW02 462 aa16.86■□□□□ 0.29
COL9A3-214ENST00000490398 GPRIN3Q6ZVF9 776 aa16.86■□□□□ 0.29
COL9A3-214ENST00000490398 METTL4Q8N3J2 472 aa16.86■□□□□ 0.29
COL9A3-214ENST00000490398 BCORP1Q8N888 145 aa16.86■□□□□ 0.29
COL9A3-214ENST00000490398 ST6GALNAC3Q8NDV1 305 aa16.86■□□□□ 0.29
COL9A3-214ENST00000490398 MYRIPQ8NFW9 859 aa16.86■□□□□ 0.29
COL9A3-214ENST00000490398 SUN3Q8TAQ9 357 aa16.86■□□□□ 0.29
COL9A3-214ENST00000490398 SLC2A12Q8TD20 617 aa16.86■□□□□ 0.29
COL9A3-214ENST00000490398 ZNF382Q96SR6 550 aa16.86■□□□□ 0.29
COL9A3-214ENST00000490398 TNFRSF12AQ9NP84 129 aa16.86■□□□□ 0.29
COL9A3-214ENST00000490398 OLAHQ9NV23 265 aa16.86■□□□□ 0.29
COL9A3-214ENST00000490398 MS4A12Q9NXJ0 267 aa16.86■□□□□ 0.29
COL9A3-214ENST00000490398 ABI3Q9P2A4 366 aa16.86■□□□□ 0.29
COL9A3-214ENST00000490398 TIMM22Q9Y584 194 aa16.86■□□□□ 0.29
COL9A3-214ENST00000490398 USP9YO00507 2555 aaPredicted RBP16.85■□□□□ 0.29
COL9A3-214ENST00000490398 CDH16O75309 829 aa16.85■□□□□ 0.29
COL9A3-214ENST00000490398 ITGA10O75578 1167 aa16.85■□□□□ 0.29
COL9A3-214ENST00000490398 RASAL1O95294 804 aa16.85■□□□□ 0.29
COL9A3-214ENST00000490398 SP1P08047 785 aa16.85■□□□□ 0.29
COL9A3-214ENST00000490398 NUDT17P0C025 328 aa16.85■□□□□ 0.29
COL9A3-214ENST00000490398 NR2F6P10588 404 aa16.85■□□□□ 0.29
COL9A3-214ENST00000490398 EDN3P14138 238 aa16.85■□□□□ 0.29
COL9A3-214ENST00000490398 TRHRP34981 398 aaPredicted RBP16.85■□□□□ 0.29
COL9A3-214ENST00000490398 CRHR1P34998 444 aa16.85■□□□□ 0.29
COL9A3-214ENST00000490398 HLCSP50747 726 aa16.85■□□□□ 0.29
COL9A3-214ENST00000490398 SLC18A2Q05940 514 aa16.85■□□□□ 0.29
COL9A3-214ENST00000490398 SERTAD2Q14140 314 aa16.85■□□□□ 0.29
COL9A3-214ENST00000490398 ZNF750Q32MQ0 723 aa16.85■□□□□ 0.29
COL9A3-214ENST00000490398 FHL5Q5TD97 284 aa16.85■□□□□ 0.29
COL9A3-214ENST00000490398 SLC25A25Q6KCM7 469 aa16.85■□□□□ 0.29
COL9A3-214ENST00000490398 WDR93Q6P2C0 686 aa16.85■□□□□ 0.29
COL9A3-214ENST00000490398 SCIMPQ6UWF3 145 aa16.85■□□□□ 0.29
COL9A3-214ENST00000490398 COMMD6Q7Z4G1 85 aa16.85■□□□□ 0.29
COL9A3-214ENST00000490398 GALNTL5Q7Z4T8 443 aa16.85■□□□□ 0.29
COL9A3-214ENST00000490398 SLC22A9Q8IVM8 553 aa16.85■□□□□ 0.29
COL9A3-214ENST00000490398 CCNYL1Q8N7R7 359 aa16.85■□□□□ 0.29
COL9A3-214ENST00000490398 MORN4Q8NDC4 146 aa16.85■□□□□ 0.29
COL9A3-214ENST00000490398 OR14A16Q8NHC5 309 aa16.85■□□□□ 0.29
COL9A3-214ENST00000490398 ZNF721Q8TF20 911 aa16.85■□□□□ 0.29
COL9A3-214ENST00000490398 NR4A3Q92570 626 aa16.85■□□□□ 0.29
COL9A3-214ENST00000490398 TANKQ92844 425 aa16.85■□□□□ 0.29
COL9A3-214ENST00000490398 TRIM45Q9H8W5 580 aaPredicted RBP16.85■□□□□ 0.29
COL9A3-214ENST00000490398 ERRFI1Q9UJM3 462 aaPredicted RBP16.85■□□□□ 0.29
COL9A3-214ENST00000490398 BLACEA4D250 179 aa16.84■□□□□ 0.29
COL9A3-214ENST00000490398 WWP2O00308 870 aa16.84■□□□□ 0.29
COL9A3-214ENST00000490398 COPEO14579 308 aa16.84■□□□□ 0.29
COL9A3-214ENST00000490398 ZFAND5O76080 213 aa16.84■□□□□ 0.29
COL9A3-214ENST00000490398 GPR75O95800 540 aa16.84■□□□□ 0.29
COL9A3-214ENST00000490398 MYL2P10916 166 aa16.84■□□□□ 0.29
COL9A3-214ENST00000490398 BUD31P41223 144 aaPredicted RBP16.84■□□□□ 0.29
COL9A3-214ENST00000490398 KCNK10P57789 538 aa16.84■□□□□ 0.29
COL9A3-214ENST00000490398 LCP2Q13094 533 aa16.84■□□□□ 0.29
COL9A3-214ENST00000490398 INAQ16352 499 aa16.84■□□□□ 0.29
COL9A3-214ENST00000490398 MDGA2Q7Z553 956 aa16.84■□□□□ 0.29
COL9A3-214ENST00000490398 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.84■□□□□ 0.29
COL9A3-214ENST00000490398 C1orf52Q8N6N3 182 aaKnown RBP16.84■□□□□ 0.29
COL9A3-214ENST00000490398 METTL6Q8TCB7 284 aa16.84■□□□□ 0.29
COL9A3-214ENST00000490398 AGAP11Q8TF27 550 aa16.84■□□□□ 0.29
COL9A3-214ENST00000490398 DAZLQ92904 295 aaKnown RBP16.84■□□□□ 0.29
COL9A3-214ENST00000490398 ZBTB9Q96C00 473 aa16.84■□□□□ 0.29
COL9A3-214ENST00000490398 SENP5Q96HI0 755 aaPredicted RBP16.84■□□□□ 0.29
COL9A3-214ENST00000490398 DGAT2Q96PD7 388 aa16.84■□□□□ 0.29
COL9A3-214ENST00000490398 TSPAN10Q9H1Z9 355 aaPredicted RBP16.84■□□□□ 0.29
COL9A3-214ENST00000490398 SNX6Q9UNH7 406 aa16.84■□□□□ 0.29
COL9A3-214ENST00000490398 ESPL1Q14674 2120 aa16.84■□□□□ 0.29
COL9A3-214ENST00000490398 DOPEY2Q9Y3R5 2298 aa16.84■□□□□ 0.29
COL9A3-214ENST00000490398 ZNHIT1O43257 154 aa16.83■□□□□ 0.28
COL9A3-214ENST00000490398 SLC25A12O75746 678 aa16.83■□□□□ 0.28
COL9A3-214ENST00000490398 OR2J2O76002 312 aa16.83■□□□□ 0.28
COL9A3-214ENST00000490398 OR6B1O95007 311 aa16.83■□□□□ 0.28
COL9A3-214ENST00000490398 AGFG2O95081 481 aa16.83■□□□□ 0.28
COL9A3-214ENST00000490398 CLPSP04118 112 aa16.83■□□□□ 0.28
COL9A3-214ENST00000490398 IGKV3-11P04433 115 aa16.83■□□□□ 0.28
COL9A3-214ENST00000490398 CD46P15529 392 aa16.83■□□□□ 0.28
COL9A3-214ENST00000490398 ALOX15P16050 662 aaPredicted RBP16.83■□□□□ 0.28
COL9A3-214ENST00000490398 CREB1P16220 341 aa16.83■□□□□ 0.28
COL9A3-214ENST00000490398 PTGER1P34995 402 aa16.83■□□□□ 0.28
COL9A3-214ENST00000490398 CCT5P48643 541 aa16.83■□□□□ 0.28
COL9A3-214ENST00000490398 CYB561P49447 251 aa16.83■□□□□ 0.28
COL9A3-214ENST00000490398 HK2P52789 917 aa16.83■□□□□ 0.28
COL9A3-214ENST00000490398 NAGLUP54802 743 aa16.83■□□□□ 0.28
COL9A3-214ENST00000490398 RNF4P78317 190 aa16.83■□□□□ 0.28
COL9A3-214ENST00000490398 HMGCS1Q01581 520 aa16.83■□□□□ 0.28
COL9A3-214ENST00000490398 RNFT1Q5M7Z0 435 aa16.83■□□□□ 0.28
COL9A3-214ENST00000490398 CCNYL2Q5T2Q4 361 aa16.83■□□□□ 0.28
COL9A3-214ENST00000490398 HSDL2Q6YN16 418 aa16.83■□□□□ 0.28
COL9A3-214ENST00000490398 C9orf40Q8IXQ3 194 aa16.83■□□□□ 0.28
COL9A3-214ENST00000490398 CAVIN3Q969G5 261 aa16.83■□□□□ 0.28
COL9A3-214ENST00000490398 TM4SF18Q96CE8 201 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms