RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 SLC35G6P0C7Q6 338 aa6.45□□□□□ -1.38
PDLIM1-203ENST00000490391 IGHV4-31P0DP07 118 aa6.45□□□□□ -1.38
PDLIM1-203ENST00000490391 GDF1P27539 372 aa6.45□□□□□ -1.38
PDLIM1-203ENST00000490391 RBL1P28749 1068 aa6.45□□□□□ -1.38
PDLIM1-203ENST00000490391 HSD17B2P37059 387 aa6.45□□□□□ -1.38
PDLIM1-203ENST00000490391 CDK9P50750 372 aaKnown RBP6.45□□□□□ -1.38
PDLIM1-203ENST00000490391 DIO3P55073 304 aa6.45□□□□□ -1.38
PDLIM1-203ENST00000490391 KCNJ2P63252 427 aa6.45□□□□□ -1.38
PDLIM1-203ENST00000490391 CT47A1Q5JQC4 288 aaPredicted RBP6.45□□□□□ -1.38
PDLIM1-203ENST00000490391 MEI1Q5TIA1 1274 aa6.45□□□□□ -1.38
PDLIM1-203ENST00000490391 PRAMEF20Q5VT98 475 aa6.45□□□□□ -1.38
PDLIM1-203ENST00000490391 FNDC7Q5VTL7 733 aa6.45□□□□□ -1.38
PDLIM1-203ENST00000490391 SLC22A10Q63ZE4 541 aa6.45□□□□□ -1.38
PDLIM1-203ENST00000490391 ITPRIPL1Q6GPH6 555 aa6.45□□□□□ -1.38
PDLIM1-203ENST00000490391 CAPN13Q6MZZ7 669 aaPredicted RBP6.45□□□□□ -1.38
PDLIM1-203ENST00000490391 OPN5Q6U736 354 aa6.45□□□□□ -1.38
PDLIM1-203ENST00000490391 HSDL2Q6YN16 418 aa6.45□□□□□ -1.38
PDLIM1-203ENST00000490391 ATG4DQ86TL0 474 aaPredicted RBP6.45□□□□□ -1.38
PDLIM1-203ENST00000490391 LDB1Q86U70 411 aaPredicted RBP6.45□□□□□ -1.38
PDLIM1-203ENST00000490391 ZNF321PQ8N8H1 164 aa6.45□□□□□ -1.38
PDLIM1-203ENST00000490391 LILRB1Q8NHL6 650 aaPredicted RBP6.45□□□□□ -1.38
PDLIM1-203ENST00000490391 FAM168AQ92567 244 aa6.45□□□□□ -1.38
PDLIM1-203ENST00000490391 CAVIN3Q969G5 261 aa6.45□□□□□ -1.38
PDLIM1-203ENST00000490391 HAUS1Q96CS2 278 aa6.45□□□□□ -1.38
PDLIM1-203ENST00000490391 STARD4Q96DR4 205 aa6.45□□□□□ -1.38
PDLIM1-203ENST00000490391 FOPNLQ96NB1 174 aa6.45□□□□□ -1.38
PDLIM1-203ENST00000490391 TM9SF2Q99805 663 aa6.45□□□□□ -1.38
PDLIM1-203ENST00000490391 TUBA1CQ9BQE3 449 aa6.45□□□□□ -1.38
PDLIM1-203ENST00000490391 P2RY12Q9H244 342 aa6.45□□□□□ -1.38
PDLIM1-203ENST00000490391 PNO1Q9NRX1 252 aaKnown RBP6.45□□□□□ -1.38
PDLIM1-203ENST00000490391 CLCF1Q9UBD9 225 aa6.45□□□□□ -1.38
PDLIM1-203ENST00000490391 NENFQ9UMX5 172 aa6.45□□□□□ -1.38
PDLIM1-203ENST00000490391 MMACHCQ9Y4U1 282 aa6.45□□□□□ -1.38
PDLIM1-203ENST00000490391 MAGED1Q9Y5V3 778 aaPredicted RBP6.45□□□□□ -1.38
PDLIM1-203ENST00000490391 CHCHD2Q9Y6H1 151 aaPredicted RBP6.45□□□□□ -1.38
PDLIM1-203ENST00000490391 IKBKGQ9Y6K9 419 aa6.45□□□□□ -1.38
PDLIM1-203ENST00000490391 A0A087X0T9 212 aa6.44□□□□□ -1.38
PDLIM1-203ENST00000490391 MEGF11A6BM72 1044 aa6.44□□□□□ -1.38
PDLIM1-203ENST00000490391 HACD1B0YJ81 288 aa6.44□□□□□ -1.38
PDLIM1-203ENST00000490391 C4orf51C9J302 202 aa6.44□□□□□ -1.38
PDLIM1-203ENST00000490391 SMNDC1O75940 238 aaKnown RBP eCLIP6.44□□□□□ -1.38
PDLIM1-203ENST00000490391 GOT2P00505 430 aaKnown RBP6.44□□□□□ -1.38
PDLIM1-203ENST00000490391 FAM228BP0C875 321 aa6.44□□□□□ -1.38
PDLIM1-203ENST00000490391 RNH1P13489 461 aaKnown RBP6.44□□□□□ -1.38
PDLIM1-203ENST00000490391 HRH2P25021 359 aa6.44□□□□□ -1.38
PDLIM1-203ENST00000490391 ATP5DP30049 168 aa6.44□□□□□ -1.38
PDLIM1-203ENST00000490391 SLC6A12P48065 614 aa6.44□□□□□ -1.38
PDLIM1-203ENST00000490391 HNRNPFP52597 415 aaKnown RBP6.44□□□□□ -1.38
PDLIM1-203ENST00000490391 RNF4P78317 190 aa6.44□□□□□ -1.38
PDLIM1-203ENST00000490391 ACVR1Q04771 509 aa6.44□□□□□ -1.38
PDLIM1-203ENST00000490391 RCAN2Q14206 197 aa6.44□□□□□ -1.38
PDLIM1-203ENST00000490391 SQLEQ14534 574 aa6.44□□□□□ -1.38
PDLIM1-203ENST00000490391 RPS6KA1Q15418 735 aa6.44□□□□□ -1.38
PDLIM1-203ENST00000490391 MPEG1Q2M385 716 aa6.44□□□□□ -1.38
PDLIM1-203ENST00000490391 MIDNQ504T8 468 aa6.44□□□□□ -1.38
PDLIM1-203ENST00000490391 LRRC38Q5VT99 294 aa6.44□□□□□ -1.38
PDLIM1-203ENST00000490391 CYB5R2Q6BCY4 276 aa6.44□□□□□ -1.38
PDLIM1-203ENST00000490391 ADAM5Q6NVV9 412 aa6.44□□□□□ -1.38
PDLIM1-203ENST00000490391 VWA1Q6PCB0 445 aa6.44□□□□□ -1.38
PDLIM1-203ENST00000490391 AFTPHQ6ULP2 937 aa6.44□□□□□ -1.38
PDLIM1-203ENST00000490391 CLEC17AQ6ZS10 378 aa6.44□□□□□ -1.38
PDLIM1-203ENST00000490391 CAND1Q86VP6 1230 aaKnown RBP6.44□□□□□ -1.38
PDLIM1-203ENST00000490391 C3orf56Q8N813 242 aa6.44□□□□□ -1.38
PDLIM1-203ENST00000490391 MFSD9Q8NBP5 474 aa6.44□□□□□ -1.38
PDLIM1-203ENST00000490391 OR8K3Q8NH51 312 aa6.44□□□□□ -1.38
PDLIM1-203ENST00000490391 GSDMBQ8TAX9 411 aa6.44□□□□□ -1.38
PDLIM1-203ENST00000490391 AKAP1Q92667 903 aaKnown RBP eCLIP6.44□□□□□ -1.38
PDLIM1-203ENST00000490391 SPACA9Q96E40 222 aaPredicted RBP6.44□□□□□ -1.38
PDLIM1-203ENST00000490391 FAM111AQ96PZ2 611 aa6.44□□□□□ -1.38
PDLIM1-203ENST00000490391 FAM129AQ9BZQ8 928 aa6.44□□□□□ -1.38
PDLIM1-203ENST00000490391 HSD3B7Q9H2F3 369 aa6.44□□□□□ -1.38
PDLIM1-203ENST00000490391 ACBD3Q9H3P7 528 aa6.44□□□□□ -1.38
PDLIM1-203ENST00000490391 ZNF696Q9H7X3 374 aa6.44□□□□□ -1.38
PDLIM1-203ENST00000490391 CLK4Q9HAZ1 481 aaKnown RBP6.44□□□□□ -1.38
PDLIM1-203ENST00000490391 ADAP2Q9NPF8 381 aa6.44□□□□□ -1.38
PDLIM1-203ENST00000490391 ABCF3Q9NUQ8 709 aa6.44□□□□□ -1.38
PDLIM1-203ENST00000490391 PIH1D1Q9NWS0 290 aaKnown RBP6.44□□□□□ -1.38
PDLIM1-203ENST00000490391 CTTNBP2NLQ9P2B4 639 aa6.44□□□□□ -1.38
PDLIM1-203ENST00000490391 UVRAGQ9P2Y5 699 aa6.44□□□□□ -1.38
PDLIM1-203ENST00000490391 SLC2A6Q9UGQ3 507 aa6.44□□□□□ -1.38
PDLIM1-203ENST00000490391 CNOT11Q9UKZ1 510 aaKnown RBP6.44□□□□□ -1.38
PDLIM1-203ENST00000490391 LIPT1Q9Y234 373 aa6.44□□□□□ -1.38
PDLIM1-203ENST00000490391 FAM95CA0A1B0GW59 222 aa6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 FAM234BA2RU67 622 aa6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 CTAGE15A4D2H0 777 aa6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 ZNF839A8K0R7 811 aa6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 C16orf97H3BN30 126 aa6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 GFYI3L273 518 aa6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 NDUFS4O43181 175 aa6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 CEP104O60308 925 aa6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 LRATO95237 230 aa6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 ACSL3O95573 720 aa6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 ZNF888P0CJ79 500 aaPredicted RBP6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 SMIM10L1P0DMW3 83 aa6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 CYP4B1P13584 511 aa6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 CPN1P15169 458 aa6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 CHRM3P20309 590 aa6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 EPHA1P21709 976 aa6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 IMPA1P29218 277 aa6.43□□□□□ -1.38
PDLIM1-203ENST00000490391 NAGLUP54802 743 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms