RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 RASL10AQ92737 203 aa3.19□□□□□ -1.9
CD46-216ENST00000490278 ATP6V0A1Q93050 837 aa3.19□□□□□ -1.9
CD46-216ENST00000490278 MRPL24Q96A35 216 aaKnown RBP3.19□□□□□ -1.9
CD46-216ENST00000490278 CXorf58Q96LI9 332 aa3.19□□□□□ -1.9
CD46-216ENST00000490278 ANKRD27Q96NW4 1050 aa3.19□□□□□ -1.9
CD46-216ENST00000490278 TAAR6Q96RI8 345 aa3.19□□□□□ -1.9
CD46-216ENST00000490278 ATP6V0BQ99437 205 aa3.19□□□□□ -1.9
CD46-216ENST00000490278 GANQ9H2C0 597 aa3.19□□□□□ -1.9
CD46-216ENST00000490278 DCLRE1BQ9H816 532 aa3.19□□□□□ -1.9
CD46-216ENST00000490278 HEXA-AS1Q9H8Q6 139 aa3.19□□□□□ -1.9
CD46-216ENST00000490278 JPT2Q9H910 190 aa3.19□□□□□ -1.9
CD46-216ENST00000490278 SP140LQ9H930 580 aa3.19□□□□□ -1.9
CD46-216ENST00000490278 PRMT8Q9NR22 394 aaPredicted RBP3.19□□□□□ -1.9
CD46-216ENST00000490278 GDF3Q9NR23 364 aa3.19□□□□□ -1.9
CD46-216ENST00000490278 DDX28Q9NUL7 540 aaKnown RBP3.19□□□□□ -1.9
CD46-216ENST00000490278 CYP39A1Q9NYL5 469 aa3.19□□□□□ -1.9
CD46-216ENST00000490278 TECRQ9NZ01 308 aaKnown RBP3.19□□□□□ -1.9
CD46-216ENST00000490278 HMG20BQ9P0W2 317 aa3.19□□□□□ -1.9
CD46-216ENST00000490278 MRTO4Q9UKD2 239 aaKnown RBP3.19□□□□□ -1.9
CD46-216ENST00000490278 NIP7Q9Y221 180 aaKnown RBP eCLIP3.19□□□□□ -1.9
CD46-216ENST00000490278 AUP1Q9Y679 476 aa3.19□□□□□ -1.9
CD46-216ENST00000490278 CACNA1FO60840 1977 aa3.18□□□□□ -1.9
CD46-216ENST00000490278 FGD5Q6ZNL6 1462 aa3.18□□□□□ -1.9
CD46-216ENST00000490278 A0A1W2PPR1 153 aa3.18□□□□□ -1.9
CD46-216ENST00000490278 ZNF724A8MTY0 619 aa3.18□□□□□ -1.9
CD46-216ENST00000490278 NEDD8-MDP1E9PL57 170 aa3.18□□□□□ -1.9
CD46-216ENST00000490278 VEGFDO43915 354 aa3.18□□□□□ -1.9
CD46-216ENST00000490278 ATP6V1G1O75348 118 aa3.18□□□□□ -1.9
CD46-216ENST00000490278 CRLF1O75462 422 aa3.18□□□□□ -1.9
CD46-216ENST00000490278 ANXA9O76027 345 aa3.18□□□□□ -1.9
CD46-216ENST00000490278 TXNDC12O95881 172 aa3.18□□□□□ -1.9
CD46-216ENST00000490278 IGHV3-13P01766 116 aa3.18□□□□□ -1.9
CD46-216ENST00000490278 P4HA1P13674 534 aa3.18□□□□□ -1.9
CD46-216ENST00000490278 SLC1A6P48664 564 aa3.18□□□□□ -1.9
CD46-216ENST00000490278 RPL27P61353 136 aaKnown RBP3.18□□□□□ -1.9
CD46-216ENST00000490278 AP1B1Q10567 949 aa3.18□□□□□ -1.9
CD46-216ENST00000490278 CBX3Q13185 183 aa3.18□□□□□ -1.9
CD46-216ENST00000490278 TSTA3Q13630 321 aaPredicted RBP3.18□□□□□ -1.9
CD46-216ENST00000490278 SIX1Q15475 284 aaPredicted RBP3.18□□□□□ -1.9
CD46-216ENST00000490278 POM121L1PQ3SYA9 428 aa3.18□□□□□ -1.9
CD46-216ENST00000490278 RPAINQ86UA6 219 aa3.18□□□□□ -1.9
CD46-216ENST00000490278 MYPOPQ86VE0 399 aaPredicted RBP3.18□□□□□ -1.9
CD46-216ENST00000490278 OR1B1Q8NGR6 318 aa3.18□□□□□ -1.9
CD46-216ENST00000490278 ESAMQ96AP7 390 aa3.18□□□□□ -1.9
CD46-216ENST00000490278 RCHY1Q96PM5 261 aa3.18□□□□□ -1.9
CD46-216ENST00000490278 PRAM1Q96QH2 718 aa3.18□□□□□ -1.9
CD46-216ENST00000490278 NAP1L3Q99457 506 aaPredicted RBP3.18□□□□□ -1.9
CD46-216ENST00000490278 SPAG8Q99932 426 aaPredicted RBP3.18□□□□□ -1.9
CD46-216ENST00000490278 SOSTQ9BQB4 213 aa3.18□□□□□ -1.9
CD46-216ENST00000490278 TRIM6Q9C030 488 aaPredicted RBP3.18□□□□□ -1.9
CD46-216ENST00000490278 SLC26A1Q9H2B4 701 aa3.18□□□□□ -1.9
CD46-216ENST00000490278 CXXC4Q9H2H0 198 aa3.18□□□□□ -1.9
CD46-216ENST00000490278 TMEM245Q9H330 911 aa3.18□□□□□ -1.9
CD46-216ENST00000490278 AKAP7Q9P0M2 348 aaPredicted RBP3.18□□□□□ -1.9
CD46-216ENST00000490278 APPL1Q9UKG1 709 aa3.18□□□□□ -1.9
CD46-216ENST00000490278 TDRKHQ9Y2W6 561 aaKnown RBP3.18□□□□□ -1.9
CD46-216ENST00000490278 MRPS2Q9Y399 296 aaKnown RBP3.18□□□□□ -1.9
CD46-216ENST00000490278 SH3PXD2BA1X283 911 aa3.17□□□□□ -1.9
CD46-216ENST00000490278 BCLAF3A2AJT9 711 aaKnown RBP3.17□□□□□ -1.9
CD46-216ENST00000490278 YJEFN3A6XGL0 299 aa3.17□□□□□ -1.9
CD46-216ENST00000490278 OR6B1O95007 311 aa3.17□□□□□ -1.9
CD46-216ENST00000490278 IGHG1P01857 330 aa3.17□□□□□ -1.9
CD46-216ENST00000490278 SERPINF2P08697 491 aa3.17□□□□□ -1.9
CD46-216ENST00000490278 AREGP15514 252 aa3.17□□□□□ -1.9
CD46-216ENST00000490278 ZNF18P17022 549 aa3.17□□□□□ -1.9
CD46-216ENST00000490278 FCARP24071 287 aa3.17□□□□□ -1.9
CD46-216ENST00000490278 LMO2P25791 158 aa3.17□□□□□ -1.9
CD46-216ENST00000490278 SHC1P29353 583 aa3.17□□□□□ -1.9
CD46-216ENST00000490278 ID1P41134 155 aa3.17□□□□□ -1.9
CD46-216ENST00000490278 ALDH3B1P43353 468 aa3.17□□□□□ -1.9
CD46-216ENST00000490278 NSFP46459 744 aaKnown RBP3.17□□□□□ -1.9
CD46-216ENST00000490278 GEMP55040 296 aa3.17□□□□□ -1.9
CD46-216ENST00000490278 HERV-K104P63124 156 aa3.17□□□□□ -1.9
CD46-216ENST00000490278 GALK2Q01415 458 aa3.17□□□□□ -1.9
CD46-216ENST00000490278 GFPT1Q06210 699 aaPredicted RBP3.17□□□□□ -1.9
CD46-216ENST00000490278 SLC17A1Q14916 467 aa3.17□□□□□ -1.9
CD46-216ENST00000490278 P2RY14Q15391 338 aa3.17□□□□□ -1.9
CD46-216ENST00000490278 TRADDQ15628 312 aa3.17□□□□□ -1.9
CD46-216ENST00000490278 MPPE1Q53F39 396 aa3.17□□□□□ -1.9
CD46-216ENST00000490278 DCAF12Q5T6F0 453 aa3.17□□□□□ -1.9
CD46-216ENST00000490278 ETFRF1Q6IPR1 90 aa3.17□□□□□ -1.9
CD46-216ENST00000490278 KRTAP5-4Q6L8H1 288 aa3.17□□□□□ -1.9
CD46-216ENST00000490278 FBXL22Q6P050 247 aa3.17□□□□□ -1.9
CD46-216ENST00000490278 ZNF841Q6ZN19 808 aa3.17□□□□□ -1.9
CD46-216ENST00000490278 Q6ZRG5 221 aa3.17□□□□□ -1.9
CD46-216ENST00000490278 NUFIP2Q7Z417 695 aaKnown RBP3.17□□□□□ -1.9
CD46-216ENST00000490278 ITIH5Q86UX2 942 aa3.17□□□□□ -1.9
CD46-216ENST00000490278 LMNTD2Q8IXW0 634 aa3.17□□□□□ -1.9
CD46-216ENST00000490278 PEX5LQ8IYB4 626 aa3.17□□□□□ -1.9
CD46-216ENST00000490278 PARP8Q8N3A8 854 aa3.17□□□□□ -1.9
CD46-216ENST00000490278 RTL3Q8N8U3 475 aaKnown RBP3.17□□□□□ -1.9
CD46-216ENST00000490278 MGARPQ8TDB4 240 aa3.17□□□□□ -1.9
CD46-216ENST00000490278 SLCO4A1Q96BD0 722 aa3.17□□□□□ -1.9
CD46-216ENST00000490278 MRPL53Q96EL3 112 aaKnown RBP3.17□□□□□ -1.9
CD46-216ENST00000490278 CDHR1Q96JP9 859 aa3.17□□□□□ -1.9
CD46-216ENST00000490278 RPGRIP1Q96KN7 1286 aa3.17□□□□□ -1.9
CD46-216ENST00000490278 ZNF560Q96MR9 790 aa3.17□□□□□ -1.9
CD46-216ENST00000490278 PSMB7Q99436 277 aa3.17□□□□□ -1.9
CD46-216ENST00000490278 CCDC28BQ9BUN5 200 aa3.17□□□□□ -1.9
CD46-216ENST00000490278 FUNDC2Q9BWH2 189 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms