RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, human

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNRNP40-206	ENST00000489853	SPOCK3	Q9BQ16	436 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	TCEAL7	Q9BRU2	100 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	C11orf84	Q9BUA3	381 aa	Predicted RBP	4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	COL25A1	Q9BXS0	654 aa	Predicted RBP	4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	MAGEB5	Q9BZ81	275 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	POLR3F	Q9H1D9	316 aa	Predicted RBP	4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	ZNF768	Q9H5H4	540 aa	Known RBP	4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	ALG9	Q9H6U8	611 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	REEP1	Q9H902	201 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	NIT2	Q9NQR4	276 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	IMP3	Q9NV31	184 aa	Known RBP	4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	NDUFB11	Q9NX14	153 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	MS4A12	Q9NXJ0	267 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	ZNF226	Q9NYT6	803 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	VAPA	Q9P0L0	249 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	DUX4	Q9UBX2	424 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	BTNL2	Q9UIR0	455 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	ING1	Q9UK53	422 aa	Predicted RBP	4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	NUBP2	Q9Y5Y2	271 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	PRAMEF27	A3QJZ7	478 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	LCHN	A4D1U4	455 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	SLC22A31	A6NKX4	558 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	ISM1	B1AKI9	464 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	GTPBP1	O00178	669 aa	Known RBP	4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	KCNK1	O00180	336 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	PER2	O15055	1255 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	ADAMDEC1	O15204	470 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	RAD17	O75943	681 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	STBD1	O95210	358 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	CCNDBP1	O95273	360 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	SIX3	O95343	332 aa	Predicted RBP	4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	GDF11	O95390	407 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	FABP3	P05413	133 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	FBP1	P09467	338 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	HPGD	P15428	266 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	CXCL3	P19876	107 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	UBA1	P22314	1058 aa	Known RBP	4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	PSMA3	P25788	255 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	SSTR4	P31391	388 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	ATP5C1	P36542	298 aa	Known RBP	4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	NNMT	P40261	264 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	PIK3CG	P48736	1102 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	RPS7	P62081	194 aa	Known RBP	4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	CRYZ	Q08257	329 aa	Known RBP	4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	ITPK1	Q13572	414 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	TRAM2	Q15035	370 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	KIAA0040	Q15053	153 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	NCF4	Q15080	339 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	TAF1A	Q15573	450 aa	Predicted RBP	4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	TSN	Q15631	228 aa	Known RBP	4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	EIF2S3L	Q2VIR3	472 aa	Known RBP	4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	RNF212	Q495C1	297 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	ARHGAP15	Q53QZ3	475 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	CCDC157	Q569K6	752 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	SPIN4	Q56A73	249 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	SPOUT1	Q5T280	376 aa	Known RBP	4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	BCL2L15	Q5TBC7	163 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	HECTD2	Q5U5R9	776 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	HACD4	Q5VWC8	232 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	RNLS	Q5VYX0	342 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	FAM219B	Q5XKK7	198 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	ZNF385C	Q66K41	422 aa	Predicted RBP	4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	ANKS6	Q68DC2	871 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	ZNF57	Q68EA5	555 aa	Predicted RBP	4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	VASN	Q6EMK4	673 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	KIAA0930	Q6ICG6	404 aa	Predicted RBP	4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	FAM180B	Q6P0A1	224 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	MZT2A	Q6P582	158 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	SUSD1	Q6UWL2	747 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	ZPBP2	Q6X784	338 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	ZNF730	Q6ZMV8	503 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	CATSPERG	Q6ZRH7	1159 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	LHFPL2	Q6ZUX7	228 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	TMEM179	Q6ZVK1	233 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	USP53	Q70EK8	1073 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	GPR142	Q7Z601	462 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	SLC51A	Q86UW1	340 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	DENND1C	Q8IV53	801 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	NAXD	Q8IW45	347 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	KLHDC8B	Q8IXV7	354 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	ADGRG2	Q8IZP9	1017 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	FTMT	Q8N4E7	242 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	PPHLN1	Q8NEY8	458 aa	Known RBP	4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	GPR156	Q8NFN8	814 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	RHEBL1	Q8TAI7	183 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	EDARADD	Q8WWZ3	215 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	PMM1	Q92871	262 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	RAB7B	Q96AH8	199 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	ELP4	Q96EB1	424 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	FAM120B	Q96EK7	910 aa	Known RBP	4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	ZNF419	Q96HQ0	510 aa	Predicted RBP	4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	PIWIL1	Q96J94	861 aa	Known RBP	4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	FAM167A	Q96KS9	214 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	MOGAT1	Q96PD6	335 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	KCNC2	Q96PR1	638 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	KCNA7	Q96RP8	456 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	EPYC	Q99645	322 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	CPEB1	Q9BZB8	566 aa	Known RBP	4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	SEMA4C	Q9C0C4	833 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	RNF32	Q9H0A6	362 aa		4.55	□□□□□ -1.68

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