RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 PSME2Q9UL46 239 aa10.37□□□□□ -0.75
CPSF7-212ENST00000489728 RAP2CQ9Y3L5 183 aa10.37□□□□□ -0.75
CPSF7-212ENST00000489728 TLN1Q9Y490 2541 aaKnown RBP10.37□□□□□ -0.75
CPSF7-212ENST00000489728 A6NL46 340 aa10.36□□□□□ -0.75
CPSF7-212ENST00000489728 TGFBR3LH3BV60 316 aa10.36□□□□□ -0.75
CPSF7-212ENST00000489728 FGF17O60258 216 aa10.36□□□□□ -0.75
CPSF7-212ENST00000489728 MYO1DO94832 1006 aa10.36□□□□□ -0.75
CPSF7-212ENST00000489728 GPR75O95800 540 aa10.36□□□□□ -0.75
CPSF7-212ENST00000489728 GBAP04062 536 aa10.36□□□□□ -0.75
CPSF7-212ENST00000489728 CHN1P15882 459 aa10.36□□□□□ -0.75
CPSF7-212ENST00000489728 ALOX15P16050 662 aaPredicted RBP10.36□□□□□ -0.75
CPSF7-212ENST00000489728 STT3AP46977 705 aa10.36□□□□□ -0.75
CPSF7-212ENST00000489728 WDR4P57081 412 aaKnown RBP10.36□□□□□ -0.75
CPSF7-212ENST00000489728 HMGCS1Q01581 520 aa10.36□□□□□ -0.75
CPSF7-212ENST00000489728 FOLH1Q04609 750 aa10.36□□□□□ -0.75
CPSF7-212ENST00000489728 ZNF763Q0D2J5 394 aa10.36□□□□□ -0.75
CPSF7-212ENST00000489728 KLRB1Q12918 225 aa10.36□□□□□ -0.75
CPSF7-212ENST00000489728 MFAP5Q13361 173 aa10.36□□□□□ -0.75
CPSF7-212ENST00000489728 HEPACAMQ14CZ8 416 aa10.36□□□□□ -0.75
CPSF7-212ENST00000489728 SPRED3Q2MJR0 410 aa10.36□□□□□ -0.75
CPSF7-212ENST00000489728 XKR7Q5GH72 579 aa10.36□□□□□ -0.75
CPSF7-212ENST00000489728 SPDYAQ5MJ70 313 aa10.36□□□□□ -0.75
CPSF7-212ENST00000489728 ATG16L1Q676U5 607 aa10.36□□□□□ -0.75
CPSF7-212ENST00000489728 C18orf63Q68DL7 685 aa10.36□□□□□ -0.75
CPSF7-212ENST00000489728 SLC48A1Q6P1K1 146 aa10.36□□□□□ -0.75
CPSF7-212ENST00000489728 LRRC34Q8IZ02 419 aa10.36□□□□□ -0.75
CPSF7-212ENST00000489728 ST13P4Q8IZP2 240 aaPredicted RBP10.36□□□□□ -0.75
CPSF7-212ENST00000489728 SLC5A8Q8N695 610 aa10.36□□□□□ -0.75
CPSF7-212ENST00000489728 ANKRD42Q8N9B4 389 aa10.36□□□□□ -0.75
CPSF7-212ENST00000489728 NFAM1Q8NET5 270 aaPredicted RBP10.36□□□□□ -0.75
CPSF7-212ENST00000489728 PSMF1Q92530 271 aa10.36□□□□□ -0.75
CPSF7-212ENST00000489728 VMP1Q96GC9 406 aa10.36□□□□□ -0.75
CPSF7-212ENST00000489728 APIPQ96GX9 242 aa10.36□□□□□ -0.75
CPSF7-212ENST00000489728 ZNF764Q96H86 408 aaPredicted RBP10.36□□□□□ -0.75
CPSF7-212ENST00000489728 FCRL1Q96LA6 429 aa10.36□□□□□ -0.75
CPSF7-212ENST00000489728 DGAT2Q96PD7 388 aa10.36□□□□□ -0.75
CPSF7-212ENST00000489728 ALOXE3Q9BYJ1 711 aa10.36□□□□□ -0.75
CPSF7-212ENST00000489728 ILKAPQ9H0C8 392 aaPredicted RBP10.36□□□□□ -0.75
CPSF7-212ENST00000489728 TEX10Q9NXF1 929 aaPredicted RBP10.36□□□□□ -0.75
CPSF7-212ENST00000489728 PCDHA9Q9Y5H5 950 aa10.36□□□□□ -0.75
CPSF7-212ENST00000489728 CLCA3PQ9Y6N3 262 aa10.36□□□□□ -0.75
CPSF7-212ENST00000489728 COL6A6A6NMZ7 2263 aa10.36□□□□□ -0.75
CPSF7-212ENST00000489728 IGHV3-20A0A0C4DH32 117 aa10.35□□□□□ -0.75
CPSF7-212ENST00000489728 GNG14A0A1W2PPG7 69 aa10.35□□□□□ -0.75
CPSF7-212ENST00000489728 KLF11O14901 512 aa10.35□□□□□ -0.75
CPSF7-212ENST00000489728 LSM1O15116 133 aaKnown RBP10.35□□□□□ -0.75
CPSF7-212ENST00000489728 LDB3O75112 727 aa10.35□□□□□ -0.75
CPSF7-212ENST00000489728 IFNA16P05015 189 aa10.35□□□□□ -0.75
CPSF7-212ENST00000489728 ANXA4P09525 319 aaPredicted RBP10.35□□□□□ -0.75
CPSF7-212ENST00000489728 SLC35E2P0CK97 266 aa10.35□□□□□ -0.75
CPSF7-212ENST00000489728 ITGAMP11215 1152 aa10.35□□□□□ -0.75
CPSF7-212ENST00000489728 PCSK2P16519 638 aa10.35□□□□□ -0.75
CPSF7-212ENST00000489728 PIK3R1P27986 724 aa10.35□□□□□ -0.75
CPSF7-212ENST00000489728 SERPINB3P29508 390 aa10.35□□□□□ -0.75
CPSF7-212ENST00000489728 ARRB2P32121 409 aa10.35□□□□□ -0.75
CPSF7-212ENST00000489728 SLC1A6P48664 564 aa10.35□□□□□ -0.75
CPSF7-212ENST00000489728 RAE1P78406 368 aaKnown RBP10.35□□□□□ -0.75
CPSF7-212ENST00000489728 STX3Q13277 289 aa10.35□□□□□ -0.75
CPSF7-212ENST00000489728 KIAA0040Q15053 153 aa10.35□□□□□ -0.75
CPSF7-212ENST00000489728 SMU1Q2TAY7 513 aa10.35□□□□□ -0.75
CPSF7-212ENST00000489728 TTMPQ5BVD1 217 aa10.35□□□□□ -0.75
CPSF7-212ENST00000489728 CLNKQ7Z7G1 428 aa10.35□□□□□ -0.75
CPSF7-212ENST00000489728 ZADH2Q8N4Q0 377 aa10.35□□□□□ -0.75
CPSF7-212ENST00000489728 APCDD1LQ8NCL9 501 aa10.35□□□□□ -0.75
CPSF7-212ENST00000489728 OR4K14Q8NGD5 310 aa10.35□□□□□ -0.75
CPSF7-212ENST00000489728 OR8K3Q8NH51 312 aa10.35□□□□□ -0.75
CPSF7-212ENST00000489728 BRIX1Q8TDN6 353 aaKnown RBP10.35□□□□□ -0.75
CPSF7-212ENST00000489728 PTPMT1Q8WUK0 201 aaPredicted RBP10.35□□□□□ -0.75
CPSF7-212ENST00000489728 ARL8AQ96BM9 186 aa10.35□□□□□ -0.75
CPSF7-212ENST00000489728 TM4SF18Q96CE8 201 aa10.35□□□□□ -0.75
CPSF7-212ENST00000489728 RBM18Q96H35 190 aaKnown RBP10.35□□□□□ -0.75
CPSF7-212ENST00000489728 ZNF354BQ96LW1 612 aa10.35□□□□□ -0.75
CPSF7-212ENST00000489728 PPP3R2Q96LZ3 170 aa10.35□□□□□ -0.75
CPSF7-212ENST00000489728 SEMA4CQ9C0C4 833 aa10.35□□□□□ -0.75
CPSF7-212ENST00000489728 TUBB1Q9H4B7 451 aa10.35□□□□□ -0.75
CPSF7-212ENST00000489728 KCNK13Q9HB14 408 aa10.35□□□□□ -0.75
CPSF7-212ENST00000489728 LRTM1Q9HBL6 345 aa10.35□□□□□ -0.75
CPSF7-212ENST00000489728 MYNNQ9NPC7 610 aa10.35□□□□□ -0.75
CPSF7-212ENST00000489728 PNO1Q9NRX1 252 aaKnown RBP10.35□□□□□ -0.75
CPSF7-212ENST00000489728 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.35□□□□□ -0.75
CPSF7-212ENST00000489728 ABI3Q9P2A4 366 aa10.35□□□□□ -0.75
CPSF7-212ENST00000489728 CPAMD8Q8IZJ3 1885 aa10.35□□□□□ -0.75
CPSF7-212ENST00000489728 ATRXP46100 2492 aa10.35□□□□□ -0.75
CPSF7-212ENST00000489728 SCN2AQ99250 2005 aa10.34□□□□□ -0.75
CPSF7-212ENST00000489728 SPTA1P02549 2419 aa10.34□□□□□ -0.75
CPSF7-212ENST00000489728 DOCK10Q96BY6 2186 aa10.34□□□□□ -0.75
CPSF7-212ENST00000489728 WDR91A4D1P6 747 aa10.34□□□□□ -0.75
CPSF7-212ENST00000489728 B8ZZF3 427 aa10.34□□□□□ -0.75
CPSF7-212ENST00000489728 PIP5K1BO14986 540 aa10.34□□□□□ -0.75
CPSF7-212ENST00000489728 SNNO75324 88 aaPredicted RBP10.34□□□□□ -0.75
CPSF7-212ENST00000489728 SEC22BO75396 215 aa10.34□□□□□ -0.75
CPSF7-212ENST00000489728 PDGFAP04085 211 aa10.34□□□□□ -0.75
CPSF7-212ENST00000489728 ATP1B1P05026 303 aa10.34□□□□□ -0.75
CPSF7-212ENST00000489728 UQCRHP07919 91 aa10.34□□□□□ -0.75
CPSF7-212ENST00000489728 DDX5P17844 614 aaKnown RBP10.34□□□□□ -0.75
CPSF7-212ENST00000489728 BGNP21810 368 aa10.34□□□□□ -0.75
CPSF7-212ENST00000489728 MAPK1P28482 360 aa10.34□□□□□ -0.75
CPSF7-212ENST00000489728 RPL14P50914 215 aaKnown RBP10.34□□□□□ -0.75
CPSF7-212ENST00000489728 CLCN2P51788 898 aa10.34□□□□□ -0.75
CPSF7-212ENST00000489728 GPR143P51810 404 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms