RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 OTUD6BQ8N6M0 293 aa8.36□□□□□ -1.07
SSBP1-212ENST00000489378 PPHLN1Q8NEY8 458 aaKnown RBP8.36□□□□□ -1.07
SSBP1-212ENST00000489378 OR10G3Q8NGC4 313 aa8.36□□□□□ -1.07
SSBP1-212ENST00000489378 ZNF417Q8TAU3 575 aa8.36□□□□□ -1.07
SSBP1-212ENST00000489378 SLC22A8Q8TCC7 542 aa8.36□□□□□ -1.07
SSBP1-212ENST00000489378 SMIM10Q96HG1 83 aa8.36□□□□□ -1.07
SSBP1-212ENST00000489378 ZNF587Q96SQ5 575 aaPredicted RBP8.36□□□□□ -1.07
SSBP1-212ENST00000489378 TUBA1CQ9BQE3 449 aa8.36□□□□□ -1.07
SSBP1-212ENST00000489378 ANGPTL4Q9BY76 406 aa8.36□□□□□ -1.07
SSBP1-212ENST00000489378 OSBPL8Q9BZF1 889 aa8.36□□□□□ -1.07
SSBP1-212ENST00000489378 AICDAQ9GZX7 198 aa8.36□□□□□ -1.07
SSBP1-212ENST00000489378 PCBD2Q9H0N5 130 aa8.36□□□□□ -1.07
SSBP1-212ENST00000489378 SPNS1Q9H2V7 528 aa8.36□□□□□ -1.07
SSBP1-212ENST00000489378 PIGMQ9H3S5 423 aa8.36□□□□□ -1.07
SSBP1-212ENST00000489378 CLK4Q9HAZ1 481 aaKnown RBP8.36□□□□□ -1.07
SSBP1-212ENST00000489378 PACSIN3Q9UKS6 424 aa8.36□□□□□ -1.07
SSBP1-212ENST00000489378 CNOT11Q9UKZ1 510 aaKnown RBP8.36□□□□□ -1.07
SSBP1-212ENST00000489378 CRYL1Q9Y2S2 319 aa8.36□□□□□ -1.07
SSBP1-212ENST00000489378 CLCA3PQ9Y6N3 262 aa8.36□□□□□ -1.07
SSBP1-212ENST00000489378 MALRD1Q5VYJ5 2156 aa8.35□□□□□ -1.07
SSBP1-212ENST00000489378 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.35□□□□□ -1.07
SSBP1-212ENST00000489378 TRBC2A0A5B9 178 aa8.35□□□□□ -1.07
SSBP1-212ENST00000489378 GOLGA8KD6RF30 607 aa8.35□□□□□ -1.07
SSBP1-212ENST00000489378 H3BMM5 538 aa8.35□□□□□ -1.07
SSBP1-212ENST00000489378 GOLGA8TH3BQL2 631 aa8.35□□□□□ -1.07
SSBP1-212ENST00000489378 FAM229AH3BQW9 127 aa8.35□□□□□ -1.07
SSBP1-212ENST00000489378 ZBTB14O43829 449 aa8.35□□□□□ -1.07
SSBP1-212ENST00000489378 TRIM3O75382 744 aaPredicted RBP8.35□□□□□ -1.07
SSBP1-212ENST00000489378 TNFSF13O75888 250 aa8.35□□□□□ -1.07
SSBP1-212ENST00000489378 RCBTB2O95199 551 aa8.35□□□□□ -1.07
SSBP1-212ENST00000489378 ESR1P03372 595 aa8.35□□□□□ -1.07
SSBP1-212ENST00000489378 NPPBP16860 134 aa8.35□□□□□ -1.07
SSBP1-212ENST00000489378 ARNTP27540 789 aa8.35□□□□□ -1.07
SSBP1-212ENST00000489378 IDUAP35475 653 aa8.35□□□□□ -1.07
SSBP1-212ENST00000489378 CDK9P50750 372 aaKnown RBP8.35□□□□□ -1.07
SSBP1-212ENST00000489378 CCR8P51685 355 aa8.35□□□□□ -1.07
SSBP1-212ENST00000489378 CLCN7P51798 805 aa8.35□□□□□ -1.07
SSBP1-212ENST00000489378 DIO3P55073 304 aa8.35□□□□□ -1.07
SSBP1-212ENST00000489378 HSD17B7P56937 341 aa8.35□□□□□ -1.07
SSBP1-212ENST00000489378 CCZ1BP86790 482 aa8.35□□□□□ -1.07
SSBP1-212ENST00000489378 CCZ1P86791 482 aaPredicted RBP8.35□□□□□ -1.07
SSBP1-212ENST00000489378 OCRLQ01968 901 aa8.35□□□□□ -1.07
SSBP1-212ENST00000489378 NAE1Q13564 534 aa8.35□□□□□ -1.07
SSBP1-212ENST00000489378 RCAN2Q14206 197 aa8.35□□□□□ -1.07
SSBP1-212ENST00000489378 TCEAL1Q15170 157 aa8.35□□□□□ -1.07
SSBP1-212ENST00000489378 PHKG1Q16816 387 aa8.35□□□□□ -1.07
SSBP1-212ENST00000489378 MPEG1Q2M385 716 aa8.35□□□□□ -1.07
SSBP1-212ENST00000489378 EIPR1Q53HC9 387 aa8.35□□□□□ -1.07
SSBP1-212ENST00000489378 NHSL2Q5HYW2 709 aa8.35□□□□□ -1.07
SSBP1-212ENST00000489378 AADACL2Q6P093 401 aa8.35□□□□□ -1.07
SSBP1-212ENST00000489378 PPP1R21Q6ZMI0 780 aa8.35□□□□□ -1.07
SSBP1-212ENST00000489378 ZNF704Q6ZNC4 412 aaPredicted RBP8.35□□□□□ -1.07
SSBP1-212ENST00000489378 FAM47BQ8NA70 645 aa8.35□□□□□ -1.07
SSBP1-212ENST00000489378 MORN4Q8NDC4 146 aa8.35□□□□□ -1.07
SSBP1-212ENST00000489378 FAM13CQ8NE31 585 aa8.35□□□□□ -1.07
SSBP1-212ENST00000489378 ABHD11Q8NFV4 315 aa8.35□□□□□ -1.07
SSBP1-212ENST00000489378 OR4K1Q8NGD4 311 aa8.35□□□□□ -1.07
SSBP1-212ENST00000489378 OR8K1Q8NGG5 319 aa8.35□□□□□ -1.07
SSBP1-212ENST00000489378 OR5L2Q8NGL0 311 aa8.35□□□□□ -1.07
SSBP1-212ENST00000489378 OR8K3Q8NH51 312 aa8.35□□□□□ -1.07
SSBP1-212ENST00000489378 ZPLD1Q8TCW7 415 aa8.35□□□□□ -1.07
SSBP1-212ENST00000489378 SLC2A12Q8TD20 617 aa8.35□□□□□ -1.07
SSBP1-212ENST00000489378 PEX13Q92968 403 aa8.35□□□□□ -1.07
SSBP1-212ENST00000489378 SPACA9Q96E40 222 aaPredicted RBP8.35□□□□□ -1.07
SSBP1-212ENST00000489378 UCN2Q96RP3 112 aa8.35□□□□□ -1.07
SSBP1-212ENST00000489378 DOHHQ9BU89 302 aa8.35□□□□□ -1.07
SSBP1-212ENST00000489378 SGPP1Q9BX95 441 aa8.35□□□□□ -1.07
SSBP1-212ENST00000489378 TPSG1Q9NRR2 321 aa8.35□□□□□ -1.07
SSBP1-212ENST00000489378 TREX1Q9NSU2 369 aa8.35□□□□□ -1.07
SSBP1-212ENST00000489378 ZNF232Q9UNY5 417 aa8.35□□□□□ -1.07
SSBP1-212ENST00000489378 CHCHD2Q9Y6H1 151 aaPredicted RBP8.35□□□□□ -1.07
SSBP1-212ENST00000489378 NOTCH1P46531 2555 aa8.34□□□□□ -1.07
SSBP1-212ENST00000489378 A0A0G2JN53 185 aa8.34□□□□□ -1.07
SSBP1-212ENST00000489378 POM121CA8CG34 1229 aa8.34□□□□□ -1.07
SSBP1-212ENST00000489378 AKR1B10O60218 316 aa8.34□□□□□ -1.07
SSBP1-212ENST00000489378 TMCC2O75069 709 aa8.34□□□□□ -1.07
SSBP1-212ENST00000489378 ADAM11O75078 769 aa8.34□□□□□ -1.07
SSBP1-212ENST00000489378 SERPINC1P01008 464 aa8.34□□□□□ -1.07
SSBP1-212ENST00000489378 HPNP05981 417 aa8.34□□□□□ -1.07
SSBP1-212ENST00000489378 F7P08709 466 aaPredicted RBP8.34□□□□□ -1.07
SSBP1-212ENST00000489378 MPC1LP0DKB6 136 aa8.34□□□□□ -1.07
SSBP1-212ENST00000489378 CYP4B1P13584 511 aa8.34□□□□□ -1.07
SSBP1-212ENST00000489378 CFPP27918 469 aa8.34□□□□□ -1.07
SSBP1-212ENST00000489378 NMBRP28336 390 aa8.34□□□□□ -1.07
SSBP1-212ENST00000489378 UGT2B10P36537 528 aa8.34□□□□□ -1.07
SSBP1-212ENST00000489378 CD79BP40259 229 aa8.34□□□□□ -1.07
SSBP1-212ENST00000489378 BTN3A2P78410 334 aa8.34□□□□□ -1.07
SSBP1-212ENST00000489378 CRADDP78560 199 aa8.34□□□□□ -1.07
SSBP1-212ENST00000489378 ETFDHQ16134 617 aa8.34□□□□□ -1.07
SSBP1-212ENST00000489378 TOR1AIP1Q5JTV8 583 aa8.34□□□□□ -1.07
SSBP1-212ENST00000489378 UBAP2Q5T6F2 1119 aaKnown RBP8.34□□□□□ -1.07
SSBP1-212ENST00000489378 AGTRAPQ6RW13 159 aa8.34□□□□□ -1.07
SSBP1-212ENST00000489378 ZNF474Q6S9Z5 364 aaPredicted RBP8.34□□□□□ -1.07
SSBP1-212ENST00000489378 LCTLQ6UWM7 567 aa8.34□□□□□ -1.07
SSBP1-212ENST00000489378 DNM1P46Q6ZS02 220 aa8.34□□□□□ -1.07
SSBP1-212ENST00000489378 ZNF662Q6ZS27 426 aa8.34□□□□□ -1.07
SSBP1-212ENST00000489378 UBE2R2Q712K3 238 aaPredicted RBP8.34□□□□□ -1.07
SSBP1-212ENST00000489378 PIWIL4Q7Z3Z4 852 aaKnown RBP8.34□□□□□ -1.07
SSBP1-212ENST00000489378 STRA8Q7Z7C7 330 aa8.34□□□□□ -1.07
SSBP1-212ENST00000489378 KIAA1328Q86T90 577 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms