RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 ATG4BQ9Y4P1 393 aa21.35■■□□□ 1.01
COL9A3-213ENST00000489045 LRBAP50851 2863 aa21.34■■□□□ 1.01
COL9A3-213ENST00000489045 ARHGAP10A1A4S6 786 aa21.34■■□□□ 1.01
COL9A3-213ENST00000489045 OR7A17O14581 309 aa21.34■■□□□ 1.01
COL9A3-213ENST00000489045 EEDO75530 441 aaKnown RBP21.34■■□□□ 1.01
COL9A3-213ENST00000489045 KRT38O76015 456 aa21.34■■□□□ 1.01
COL9A3-213ENST00000489045 CLDN9O95484 217 aa21.34■■□□□ 1.01
COL9A3-213ENST00000489045 COX7A2P14406 83 aa21.34■■□□□ 1.01
COL9A3-213ENST00000489045 STT3AP46977 705 aa21.34■■□□□ 1.01
COL9A3-213ENST00000489045 NEK2P51955 445 aa21.34■■□□□ 1.01
COL9A3-213ENST00000489045 FOLH1Q04609 750 aa21.34■■□□□ 1.01
COL9A3-213ENST00000489045 TSNAXIP1Q2TAA8 658 aa21.34■■□□□ 1.01
COL9A3-213ENST00000489045 SP5Q6BEB4 398 aaPredicted RBP21.34■■□□□ 1.01
COL9A3-213ENST00000489045 FGD2Q7Z6J4 655 aa21.34■■□□□ 1.01
COL9A3-213ENST00000489045 ZFP62Q8NB50 900 aaPredicted RBP21.34■■□□□ 1.01
COL9A3-213ENST00000489045 C7orf57Q8NEG2 295 aa21.34■■□□□ 1.01
COL9A3-213ENST00000489045 OR52B6Q8NGF0 335 aa21.34■■□□□ 1.01
COL9A3-213ENST00000489045 ZNF721Q8TF20 911 aa21.34■■□□□ 1.01
COL9A3-213ENST00000489045 DEPPQ9NTK1 212 aa21.34■■□□□ 1.01
COL9A3-213ENST00000489045 PCTPQ9UKL6 214 aa21.34■■□□□ 1.01
COL9A3-213ENST00000489045 TMCO1Q9UM00 188 aa21.34■■□□□ 1.01
COL9A3-213ENST00000489045 KLF2Q9Y5W3 355 aaPredicted RBP21.34■■□□□ 1.01
COL9A3-213ENST00000489045 A0A087WUV0 522 aaPredicted RBP21.33■■□□□ 1.01
COL9A3-213ENST00000489045 A0A0A6YYD5 115 aa21.33■■□□□ 1.01
COL9A3-213ENST00000489045 TRIM49D1C9J1S8 452 aa21.33■■□□□ 1.01
COL9A3-213ENST00000489045 STX16-NPEPL1H3BU86 382 aa21.33■■□□□ 1.01
COL9A3-213ENST00000489045 STX16O14662 325 aa21.33■■□□□ 1.01
COL9A3-213ENST00000489045 TMPRSS11DO60235 418 aa21.33■■□□□ 1.01
COL9A3-213ENST00000489045 HS6ST1O60243 411 aa21.33■■□□□ 1.01
COL9A3-213ENST00000489045 CNTFP26441 200 aa21.33■■□□□ 1.01
COL9A3-213ENST00000489045 GRNP28799 593 aaKnown RBP21.33■■□□□ 1.01
COL9A3-213ENST00000489045 TLX1P31314 330 aaPredicted RBP21.33■■□□□ 1.01
COL9A3-213ENST00000489045 BSGP35613 385 aa21.33■■□□□ 1.01
COL9A3-213ENST00000489045 BUD31P41223 144 aaPredicted RBP21.33■■□□□ 1.01
COL9A3-213ENST00000489045 CCNG1P51959 295 aa21.33■■□□□ 1.01
COL9A3-213ENST00000489045 PLIN5Q00G26 463 aa21.33■■□□□ 1.01
COL9A3-213ENST00000489045 CUL3Q13618 768 aa21.33■■□□□ 1.01
COL9A3-213ENST00000489045 MRM1Q6IN84 353 aaKnown RBP21.33■■□□□ 1.01
COL9A3-213ENST00000489045 DGAT2L6Q6ZPD8 337 aa21.33■■□□□ 1.01
COL9A3-213ENST00000489045 C16orf52Q8NHV5 167 aa21.33■■□□□ 1.01
COL9A3-213ENST00000489045 TANKQ92844 425 aa21.33■■□□□ 1.01
COL9A3-213ENST00000489045 ATP6V1E2Q96A05 226 aa21.33■■□□□ 1.01
COL9A3-213ENST00000489045 PPWD1Q96BP3 646 aaKnown RBP21.33■■□□□ 1.01
COL9A3-213ENST00000489045 NSUN5Q96P11 429 aaKnown RBP21.33■■□□□ 1.01
COL9A3-213ENST00000489045 LYARQ9NX58 379 aaKnown RBP21.33■■□□□ 1.01
COL9A3-213ENST00000489045 ZNF180Q9UJW8 692 aa21.33■■□□□ 1.01
COL9A3-213ENST00000489045 MEMO1Q9Y316 297 aa21.33■■□□□ 1.01
COL9A3-213ENST00000489045 CACNA1CQ13936 2221 aa21.33■■□□□ 1
COL9A3-213ENST00000489045 FOXE1O00358 373 aaPredicted RBP21.32■■□□□ 1
COL9A3-213ENST00000489045 HNRNPRO43390 633 aaKnown RBP21.32■■□□□ 1
COL9A3-213ENST00000489045 PROM1O43490 865 aa21.32■■□□□ 1
COL9A3-213ENST00000489045 SMIM24O75264 130 aa21.32■■□□□ 1
COL9A3-213ENST00000489045 COL6A2P12110 1019 aa21.32■■□□□ 1
COL9A3-213ENST00000489045 CYP20A1Q6UW02 462 aa21.32■■□□□ 1
COL9A3-213ENST00000489045 BNC2Q6ZN30 1099 aaPredicted RBP21.32■■□□□ 1
COL9A3-213ENST00000489045 NCCRP1Q6ZVX7 275 aaPredicted RBP21.32■■□□□ 1
COL9A3-213ENST00000489045 OR5L2Q8NGL0 311 aa21.32■■□□□ 1
COL9A3-213ENST00000489045 AGAP11Q8TF27 550 aa21.32■■□□□ 1
COL9A3-213ENST00000489045 MARVELD3Q96A59 401 aa21.32■■□□□ 1
COL9A3-213ENST00000489045 MTFMTQ96DP5 389 aaKnown RBP21.32■■□□□ 1
COL9A3-213ENST00000489045 SENP5Q96HI0 755 aaPredicted RBP21.32■■□□□ 1
COL9A3-213ENST00000489045 DDX31Q9H8H2 851 aaKnown RBP21.32■■□□□ 1
COL9A3-213ENST00000489045 ZBTB26Q9HCK0 441 aa21.32■■□□□ 1
COL9A3-213ENST00000489045 PSD3Q9NYI0 1048 aa21.32■■□□□ 1
COL9A3-213ENST00000489045 ASB4Q9Y574 426 aa21.32■■□□□ 1
COL9A3-213ENST00000489045 ZNF407Q9C0G0 2248 aa21.32■■□□□ 1
COL9A3-213ENST00000489045 MYO9AB2RTY4 2548 aa21.31■■□□□ 1
COL9A3-213ENST00000489045 PINLYPA6NC86 204 aa21.31■■□□□ 1
COL9A3-213ENST00000489045 CDC40O60508 579 aaKnown RBP eCLIP21.31■■□□□ 1
COL9A3-213ENST00000489045 ZNF354AO60765 605 aaPredicted RBP21.31■■□□□ 1
COL9A3-213ENST00000489045 FAM58BPP0C7Q3 252 aa21.31■■□□□ 1
COL9A3-213ENST00000489045 NR2F6P10588 404 aa21.31■■□□□ 1
COL9A3-213ENST00000489045 ALOX15P16050 662 aaPredicted RBP21.31■■□□□ 1
COL9A3-213ENST00000489045 TRAF3Q13114 568 aa21.31■■□□□ 1
COL9A3-213ENST00000489045 BIKQ13323 160 aa21.31■■□□□ 1
COL9A3-213ENST00000489045 ZNF750Q32MQ0 723 aa21.31■■□□□ 1
COL9A3-213ENST00000489045 CMPK2Q5EBM0 449 aa21.31■■□□□ 1
COL9A3-213ENST00000489045 XKRXQ6PP77 449 aa21.31■■□□□ 1
COL9A3-213ENST00000489045 NUDT13Q86X67 352 aa21.31■■□□□ 1
COL9A3-213ENST00000489045 DOLPP1Q86YN1 238 aa21.31■■□□□ 1
COL9A3-213ENST00000489045 OR2M7Q8NG81 312 aa21.31■■□□□ 1
COL9A3-213ENST00000489045 RBM18Q96H35 190 aaKnown RBP21.31■■□□□ 1
COL9A3-213ENST00000489045 PHF12Q96QT6 1004 aa21.31■■□□□ 1
COL9A3-213ENST00000489045 NTMT1Q9BV86 223 aa21.31■■□□□ 1
COL9A3-213ENST00000489045 PPT2Q9UMR5 302 aa21.31■■□□□ 1
COL9A3-213ENST00000489045 ABCA12Q86UK0 2595 aa21.3■■□□□ 1
COL9A3-213ENST00000489045 A0A0G2JMM0 328 aa21.3■■□□□ 1
COL9A3-213ENST00000489045 A0A1B0GTH9 108 aa21.3■■□□□ 1
COL9A3-213ENST00000489045 A0A1W2PPB8 328 aa21.3■■□□□ 1
COL9A3-213ENST00000489045 A0A1W2PR48 441 aa21.3■■□□□ 1
COL9A3-213ENST00000489045 A0A1W2PRS3 328 aa21.3■■□□□ 1
COL9A3-213ENST00000489045 GLOD5A6NK44 160 aa21.3■■□□□ 1
COL9A3-213ENST00000489045 WASHC1A8K0Z3 465 aa21.3■■□□□ 1
COL9A3-213ENST00000489045 KIR3DP1A8MWS1 328 aa21.3■■□□□ 1
COL9A3-213ENST00000489045 G3V3Y1 287 aa21.3■■□□□ 1
COL9A3-213ENST00000489045 KIF2AO00139 706 aaPredicted RBP21.3■■□□□ 1
COL9A3-213ENST00000489045 HRKO00198 91 aa21.3■■□□□ 1
COL9A3-213ENST00000489045 PRRG2O14669 202 aa21.3■■□□□ 1
COL9A3-213ENST00000489045 DYRK3O43781 588 aa21.3■■□□□ 1
COL9A3-213ENST00000489045 GBAP04062 536 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms