RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 MAPK12P53778 367 aa13.32□□□□□ -0.28
BRCA1-218ENST00000489037 NAGLUP54802 743 aa13.32□□□□□ -0.28
BRCA1-218ENST00000489037 MLF1P58340 268 aa13.32□□□□□ -0.28
BRCA1-218ENST00000489037 DNAJB13P59910 316 aa13.32□□□□□ -0.28
BRCA1-218ENST00000489037 FOLH1Q04609 750 aa13.32□□□□□ -0.28
BRCA1-218ENST00000489037 SLC18A2Q05940 514 aa13.32□□□□□ -0.28
BRCA1-218ENST00000489037 CSTF3Q12996 717 aaKnown RBP13.32□□□□□ -0.28
BRCA1-218ENST00000489037 TUBA3CQ13748 450 aa13.32□□□□□ -0.28
BRCA1-218ENST00000489037 NR6A1Q15406 480 aa13.32□□□□□ -0.28
BRCA1-218ENST00000489037 OR1C1Q15619 314 aa13.32□□□□□ -0.28
BRCA1-218ENST00000489037 OR52E8Q6IFG1 317 aa13.32□□□□□ -0.28
BRCA1-218ENST00000489037 MRM1Q6IN84 353 aaKnown RBP13.32□□□□□ -0.28
BRCA1-218ENST00000489037 TUBA3EQ6PEY2 450 aa13.32□□□□□ -0.28
BRCA1-218ENST00000489037 HSDL2Q6YN16 418 aa13.32□□□□□ -0.28
BRCA1-218ENST00000489037 OR4N5Q8IXE1 308 aa13.32□□□□□ -0.28
BRCA1-218ENST00000489037 METTL4Q8N3J2 472 aa13.32□□□□□ -0.28
BRCA1-218ENST00000489037 TMEM156Q8N614 296 aa13.32□□□□□ -0.28
BRCA1-218ENST00000489037 GBP7Q8N8V2 638 aaPredicted RBP13.32□□□□□ -0.28
BRCA1-218ENST00000489037 TMEM178AQ8NBL3 297 aa13.32□□□□□ -0.28
BRCA1-218ENST00000489037 FAM98AQ8NCA5 519 aaKnown RBP13.32□□□□□ -0.28
BRCA1-218ENST00000489037 APCDD1LQ8NCL9 501 aa13.32□□□□□ -0.28
BRCA1-218ENST00000489037 OR5L2Q8NGL0 311 aa13.32□□□□□ -0.28
BRCA1-218ENST00000489037 THAP3Q8WTV1 239 aaPredicted RBP13.32□□□□□ -0.28
BRCA1-218ENST00000489037 FAR1Q8WVX9 515 aa13.32□□□□□ -0.28
BRCA1-218ENST00000489037 TMEM125Q96AQ2 219 aa13.32□□□□□ -0.28
BRCA1-218ENST00000489037 ANKRD9Q96BM1 317 aaPredicted RBP13.32□□□□□ -0.28
BRCA1-218ENST00000489037 ZNF717Q9BY31 904 aaPredicted RBP13.32□□□□□ -0.28
BRCA1-218ENST00000489037 MRPL1Q9BYD6 325 aaKnown RBP13.32□□□□□ -0.28
BRCA1-218ENST00000489037 OR8D2Q9GZM6 311 aa13.32□□□□□ -0.28
BRCA1-218ENST00000489037 FARSBQ9NSD9 589 aaKnown RBP13.32□□□□□ -0.28
BRCA1-218ENST00000489037 ANKRD10Q9NXR5 420 aa13.32□□□□□ -0.28
BRCA1-218ENST00000489037 LRFN1Q9P244 771 aa13.32□□□□□ -0.28
BRCA1-218ENST00000489037 PCDHGB6Q9Y5F9 930 aa13.32□□□□□ -0.28
BRCA1-218ENST00000489037 CLDN16Q9Y5I7 305 aa13.32□□□□□ -0.28
BRCA1-218ENST00000489037 A0A1B0GTL3 188 aa13.31□□□□□ -0.28
BRCA1-218ENST00000489037 A0A1W2PR48 441 aa13.31□□□□□ -0.28
BRCA1-218ENST00000489037 ZIC2O95409 532 aaPredicted RBP13.31□□□□□ -0.28
BRCA1-218ENST00000489037 GPR75O95800 540 aa13.31□□□□□ -0.28
BRCA1-218ENST00000489037 ALOX15P16050 662 aaPredicted RBP13.31□□□□□ -0.28
BRCA1-218ENST00000489037 PIK3R1P27986 724 aa13.31□□□□□ -0.28
BRCA1-218ENST00000489037 TPP2P29144 1249 aaPredicted RBP13.31□□□□□ -0.28
BRCA1-218ENST00000489037 DEKP35659 375 aaKnown RBP13.31□□□□□ -0.28
BRCA1-218ENST00000489037 FHL5Q5TD97 284 aa13.31□□□□□ -0.28
BRCA1-218ENST00000489037 C6orf163Q5TEZ5 329 aa13.31□□□□□ -0.28
BRCA1-218ENST00000489037 LIPMQ5VYY2 423 aa13.31□□□□□ -0.28
BRCA1-218ENST00000489037 COMMD6Q7Z4G1 85 aa13.31□□□□□ -0.28
BRCA1-218ENST00000489037 TRABD2AQ86V40 505 aa13.31□□□□□ -0.28
BRCA1-218ENST00000489037 HOMEZQ8IX15 550 aa13.31□□□□□ -0.28
BRCA1-218ENST00000489037 SRRM1Q8IYB3 904 aaKnown RBP13.31□□□□□ -0.28
BRCA1-218ENST00000489037 ST13P4Q8IZP2 240 aaPredicted RBP13.31□□□□□ -0.28
BRCA1-218ENST00000489037 MREGQ8N565 214 aa13.31□□□□□ -0.28
BRCA1-218ENST00000489037 DNAJB8Q8NHS0 232 aa13.31□□□□□ -0.28
BRCA1-218ENST00000489037 PTPMT1Q8WUK0 201 aaPredicted RBP13.31□□□□□ -0.28
BRCA1-218ENST00000489037 SREK1Q8WXA9 508 aaKnown RBP13.31□□□□□ -0.28
BRCA1-218ENST00000489037 APOPT1Q96IL0 206 aa13.31□□□□□ -0.28
BRCA1-218ENST00000489037 SMC6Q96SB8 1091 aa13.31□□□□□ -0.28
BRCA1-218ENST00000489037 NPAS2Q99743 824 aa13.31□□□□□ -0.28
BRCA1-218ENST00000489037 FAIM2Q9BWQ8 316 aa13.31□□□□□ -0.28
BRCA1-218ENST00000489037 GSTO2Q9H4Y5 243 aa13.31□□□□□ -0.28
BRCA1-218ENST00000489037 OLAHQ9NV23 265 aa13.31□□□□□ -0.28
BRCA1-218ENST00000489037 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.31□□□□□ -0.28
BRCA1-218ENST00000489037 OXSMQ9NWU1 459 aa13.31□□□□□ -0.28
BRCA1-218ENST00000489037 MKS1Q9NXB0 559 aa13.31□□□□□ -0.28
BRCA1-218ENST00000489037 LGALS13Q9UHV8 139 aa13.31□□□□□ -0.28
BRCA1-218ENST00000489037 ZNF225Q9UK10 706 aa13.31□□□□□ -0.28
BRCA1-218ENST00000489037 PSME2Q9UL46 239 aa13.31□□□□□ -0.28
BRCA1-218ENST00000489037 YARS2Q9Y2Z4 477 aaKnown RBP13.31□□□□□ -0.28
BRCA1-218ENST00000489037 ANKUB1A6NFN9 424 aa13.3□□□□□ -0.28
BRCA1-218ENST00000489037 GLOD5A6NK44 160 aa13.3□□□□□ -0.28
BRCA1-218ENST00000489037 MAN1A2O60476 641 aa13.3□□□□□ -0.28
BRCA1-218ENST00000489037 ITGA10O75578 1167 aa13.3□□□□□ -0.28
BRCA1-218ENST00000489037 AIFM1O95831 613 aa13.3□□□□□ -0.28
BRCA1-218ENST00000489037 EDN3P14138 238 aa13.3□□□□□ -0.28
BRCA1-218ENST00000489037 UQCRFS1P47985 274 aa13.3□□□□□ -0.28
BRCA1-218ENST00000489037 HLCSP50747 726 aa13.3□□□□□ -0.28
BRCA1-218ENST00000489037 SSR4P51571 173 aa13.3□□□□□ -0.28
BRCA1-218ENST00000489037 GPR143P51810 404 aa13.3□□□□□ -0.28
BRCA1-218ENST00000489037 IGLV3-21P80748 117 aaPredicted RBP13.3□□□□□ -0.28
BRCA1-218ENST00000489037 IMPG1Q17R60 797 aa13.3□□□□□ -0.28
BRCA1-218ENST00000489037 SPINK14Q6IE38 97 aa13.3□□□□□ -0.28
BRCA1-218ENST00000489037 SLC25A25Q6KCM7 469 aa13.3□□□□□ -0.28
BRCA1-218ENST00000489037 FAM26EQ8N5C1 309 aa13.3□□□□□ -0.28
BRCA1-218ENST00000489037 ST6GALNAC3Q8NDV1 305 aa13.3□□□□□ -0.28
BRCA1-218ENST00000489037 OR4K14Q8NGD5 310 aa13.3□□□□□ -0.28
BRCA1-218ENST00000489037 PRR7Q8TB68 274 aa13.3□□□□□ -0.28
BRCA1-218ENST00000489037 SLC2A12Q8TD20 617 aa13.3□□□□□ -0.28
BRCA1-218ENST00000489037 AGAP11Q8TF27 550 aa13.3□□□□□ -0.28
BRCA1-218ENST00000489037 HBEGFQ99075 208 aa13.3□□□□□ -0.28
BRCA1-218ENST00000489037 KLHL1Q9NR64 748 aa13.3□□□□□ -0.28
BRCA1-218ENST00000489037 RAB21Q9UL25 225 aa13.3□□□□□ -0.28
BRCA1-218ENST00000489037 NTNG1Q9Y2I2 539 aa13.3□□□□□ -0.28
BRCA1-218ENST00000489037 PLLPQ9Y342 182 aa13.3□□□□□ -0.28
BRCA1-218ENST00000489037 DOPEY2Q9Y3R5 2298 aa13.29□□□□□ -0.28
BRCA1-218ENST00000489037 C1orf226A1L170 272 aa13.29□□□□□ -0.28
BRCA1-218ENST00000489037 TRIM13O60858 407 aa13.29□□□□□ -0.28
BRCA1-218ENST00000489037 PRKRAO75569 313 aaKnown RBP13.29□□□□□ -0.28
BRCA1-218ENST00000489037 CBX6O95503 412 aa13.29□□□□□ -0.28
BRCA1-218ENST00000489037 SP1P08047 785 aa13.29□□□□□ -0.28
BRCA1-218ENST00000489037 TRHRP34981 398 aaPredicted RBP13.29□□□□□ -0.28
BRCA1-218ENST00000489037 TRA2BP62995 288 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms