RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 GPN2Q9H9Y4 310 aaPredicted RBP11.58□□□□□ -0.56
TRAIP-209ENST00000488860 NECTIN3Q9NQS3 549 aa11.58□□□□□ -0.56
TRAIP-209ENST00000488860 PRDM9Q9NQV7 894 aa11.58□□□□□ -0.56
TRAIP-209ENST00000488860 SAR1AQ9NR31 198 aa11.58□□□□□ -0.56
TRAIP-209ENST00000488860 SDR39U1Q9NRG7 319 aaPredicted RBP11.58□□□□□ -0.56
TRAIP-209ENST00000488860 GIMAP4Q9NUV9 329 aa11.58□□□□□ -0.56
TRAIP-209ENST00000488860 CCDC167Q9P0B6 97 aa11.58□□□□□ -0.56
TRAIP-209ENST00000488860 C3orf18Q9UK00 162 aa11.58□□□□□ -0.56
TRAIP-209ENST00000488860 MAPRE3Q9UPY8 281 aa11.58□□□□□ -0.56
TRAIP-209ENST00000488860 EXO1Q9UQ84 846 aaKnown RBP11.58□□□□□ -0.56
TRAIP-209ENST00000488860 WBP11Q9Y2W2 641 aaKnown RBP11.58□□□□□ -0.56
TRAIP-209ENST00000488860 MMACHCQ9Y4U1 282 aa11.58□□□□□ -0.56
TRAIP-209ENST00000488860 MRPS18BQ9Y676 258 aaKnown RBP11.58□□□□□ -0.56
TRAIP-209ENST00000488860 ZNF780BQ9Y6R6 833 aa11.58□□□□□ -0.56
TRAIP-209ENST00000488860 A0A1W2PS29 197 aa11.57□□□□□ -0.56
TRAIP-209ENST00000488860 MED19A0JLT2 244 aaPredicted RBP11.57□□□□□ -0.56
TRAIP-209ENST00000488860 VSTM2BA6NLU5 285 aa11.57□□□□□ -0.56
TRAIP-209ENST00000488860 IDSB3KWA1 339 aa11.57□□□□□ -0.56
TRAIP-209ENST00000488860 C21orf140B9A014 251 aa11.57□□□□□ -0.56
TRAIP-209ENST00000488860 ANKRD28O15084 1053 aa11.57□□□□□ -0.56
TRAIP-209ENST00000488860 PDPK1O15530 556 aa11.57□□□□□ -0.56
TRAIP-209ENST00000488860 CD63P08962 238 aa11.57□□□□□ -0.56
TRAIP-209ENST00000488860 DDX5P17844 614 aaKnown RBP11.57□□□□□ -0.56
TRAIP-209ENST00000488860 EFNA1P20827 205 aaPredicted RBP11.57□□□□□ -0.56
TRAIP-209ENST00000488860 FEN1P39748 380 aaKnown RBP11.57□□□□□ -0.56
TRAIP-209ENST00000488860 EFNA3P52797 238 aa11.57□□□□□ -0.56
TRAIP-209ENST00000488860 EMP2P54851 167 aa11.57□□□□□ -0.56
TRAIP-209ENST00000488860 HSD17B7P56937 341 aa11.57□□□□□ -0.56
TRAIP-209ENST00000488860 KCNK10P57789 538 aa11.57□□□□□ -0.56
TRAIP-209ENST00000488860 IRX1P78414 480 aaPredicted RBP11.57□□□□□ -0.56
TRAIP-209ENST00000488860 RHAGQ02094 409 aa11.57□□□□□ -0.56
TRAIP-209ENST00000488860 PDE7AQ13946 482 aa11.57□□□□□ -0.56
TRAIP-209ENST00000488860 ZNF750Q32MQ0 723 aa11.57□□□□□ -0.56
TRAIP-209ENST00000488860 FAM174BQ3ZCQ3 159 aa11.57□□□□□ -0.56
TRAIP-209ENST00000488860 TIGD2Q4W5G0 525 aa11.57□□□□□ -0.56
TRAIP-209ENST00000488860 SPANXN4Q5MJ08 99 aa11.57□□□□□ -0.56
TRAIP-209ENST00000488860 CPTPQ5TA50 214 aa11.57□□□□□ -0.56
TRAIP-209ENST00000488860 QSOX2Q6ZRP7 698 aa11.57□□□□□ -0.56
TRAIP-209ENST00000488860 DTX1Q86Y01 620 aa11.57□□□□□ -0.56
TRAIP-209ENST00000488860 SCUBE1Q8IWY4 988 aa11.57□□□□□ -0.56
TRAIP-209ENST00000488860 RIMKLAQ8IXN7 391 aa11.57□□□□□ -0.56
TRAIP-209ENST00000488860 OR4K14Q8NGD5 310 aa11.57□□□□□ -0.56
TRAIP-209ENST00000488860 TANKQ92844 425 aa11.57□□□□□ -0.56
TRAIP-209ENST00000488860 MTERF3Q96E29 417 aa11.57□□□□□ -0.56
TRAIP-209ENST00000488860 BBS4Q96RK4 519 aa11.57□□□□□ -0.56
TRAIP-209ENST00000488860 PRPF18Q99633 342 aaKnown RBP11.57□□□□□ -0.56
TRAIP-209ENST00000488860 CLMPQ9H6B4 373 aa11.57□□□□□ -0.56
TRAIP-209ENST00000488860 CCDC86Q9H6F5 360 aaKnown RBP11.57□□□□□ -0.56
TRAIP-209ENST00000488860 ATAD3AQ9NVI7 634 aa11.57□□□□□ -0.56
TRAIP-209ENST00000488860 EHD3Q9NZN3 535 aa11.57□□□□□ -0.56
TRAIP-209ENST00000488860 ATP6V1HQ9UI12 483 aa11.57□□□□□ -0.56
TRAIP-209ENST00000488860 PSME2Q9UL46 239 aa11.57□□□□□ -0.56
TRAIP-209ENST00000488860 FARSAQ9Y285 508 aaKnown RBP11.57□□□□□ -0.56
TRAIP-209ENST00000488860 CAPN7Q9Y6W3 813 aa11.57□□□□□ -0.56
TRAIP-209ENST00000488860 FAM234BA2RU67 622 aa11.56□□□□□ -0.56
TRAIP-209ENST00000488860 GABRR3A8MPY1 467 aa11.56□□□□□ -0.56
TRAIP-209ENST00000488860 A8MUA0 341 aa11.56□□□□□ -0.56
TRAIP-209ENST00000488860 TGFBR3LH3BV60 316 aa11.56□□□□□ -0.56
TRAIP-209ENST00000488860 TLX3O43711 291 aaPredicted RBP11.56□□□□□ -0.56
TRAIP-209ENST00000488860 OR10H2O60403 315 aa11.56□□□□□ -0.56
TRAIP-209ENST00000488860 CTNSO60931 367 aa11.56□□□□□ -0.56
TRAIP-209ENST00000488860 ALOX12BO75342 701 aa11.56□□□□□ -0.56
TRAIP-209ENST00000488860 GPR75O95800 540 aa11.56□□□□□ -0.56
TRAIP-209ENST00000488860 IFNA16P05015 189 aa11.56□□□□□ -0.56
TRAIP-209ENST00000488860 LAMP1P11279 417 aa11.56□□□□□ -0.56
TRAIP-209ENST00000488860 LIFP15018 202 aa11.56□□□□□ -0.56
TRAIP-209ENST00000488860 PCSK2P16519 638 aa11.56□□□□□ -0.56
TRAIP-209ENST00000488860 F8A1P23610 371 aa11.56□□□□□ -0.56
TRAIP-209ENST00000488860 PTPN4P29074 926 aa11.56□□□□□ -0.56
TRAIP-209ENST00000488860 OTX2P32243 289 aa11.56□□□□□ -0.56
TRAIP-209ENST00000488860 S100A3P33764 101 aa11.56□□□□□ -0.56
TRAIP-209ENST00000488860 PTGER1P34995 402 aa11.56□□□□□ -0.56
TRAIP-209ENST00000488860 POLR2JP52435 117 aaKnown RBP11.56□□□□□ -0.56
TRAIP-209ENST00000488860 DGKQP52824 942 aa11.56□□□□□ -0.56
TRAIP-209ENST00000488860 C21orf58P58505 322 aa11.56□□□□□ -0.56
TRAIP-209ENST00000488860 EEF1A2Q05639 463 aaKnown RBP11.56□□□□□ -0.56
TRAIP-209ENST00000488860 KLF10Q13118 480 aa11.56□□□□□ -0.56
TRAIP-209ENST00000488860 SRSF6Q13247 344 aaKnown RBP11.56□□□□□ -0.56
TRAIP-209ENST00000488860 CLN3Q13286 438 aa11.56□□□□□ -0.56
TRAIP-209ENST00000488860 NSDHLQ15738 373 aa11.56□□□□□ -0.56
TRAIP-209ENST00000488860 PRSS53Q2L4Q9 553 aa11.56□□□□□ -0.56
TRAIP-209ENST00000488860 OR4F3Q6IEY1 312 aa11.56□□□□□ -0.56
TRAIP-209ENST00000488860 LANCL3Q6ZV70 420 aa11.56□□□□□ -0.56
TRAIP-209ENST00000488860 CPSF7Q8N684 471 aaKnown RBP11.56□□□□□ -0.56
TRAIP-209ENST00000488860 GLB1L3Q8NCI6 653 aaPredicted RBP11.56□□□□□ -0.56
TRAIP-209ENST00000488860 OR2Y1Q8NGV0 311 aa11.56□□□□□ -0.56
TRAIP-209ENST00000488860 KCNE4Q8WWG9 221 aa11.56□□□□□ -0.56
TRAIP-209ENST00000488860 METTL21AQ8WXB1 218 aa11.56□□□□□ -0.56
TRAIP-209ENST00000488860 ANKRD9Q96BM1 317 aaPredicted RBP11.56□□□□□ -0.56
TRAIP-209ENST00000488860 TESCQ96BS2 214 aa11.56□□□□□ -0.56
TRAIP-209ENST00000488860 ERP27Q96DN0 273 aa11.56□□□□□ -0.56
TRAIP-209ENST00000488860 CNRIP1Q96F85 164 aaPredicted RBP11.56□□□□□ -0.56
TRAIP-209ENST00000488860 DGAT2Q96PD7 388 aa11.56□□□□□ -0.56
TRAIP-209ENST00000488860 DUSP26Q9BV47 211 aa11.56□□□□□ -0.56
TRAIP-209ENST00000488860 ALOXE3Q9BYJ1 711 aa11.56□□□□□ -0.56
TRAIP-209ENST00000488860 SLC35C2Q9NQQ7 365 aa11.56□□□□□ -0.56
TRAIP-209ENST00000488860 PNO1Q9NRX1 252 aaKnown RBP11.56□□□□□ -0.56
TRAIP-209ENST00000488860 MRGBPQ9NV56 204 aa11.56□□□□□ -0.56
TRAIP-209ENST00000488860 KCND3Q9UK17 655 aa11.56□□□□□ -0.56
TRAIP-209ENST00000488860 CES1P1Q9UKY3 287 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms