RNA–Protein interactions for RNA: ENST00000488753.1

ATPAF2-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-207ENST00000488753 MYLK4Q86YV6 388 aaPredicted RBP12.11□□□□□ -0.47
ATPAF2-207ENST00000488753 OR52N2Q8NGI0 321 aa12.11□□□□□ -0.47
ATPAF2-207ENST00000488753 RBM18Q96H35 190 aaKnown RBP12.11□□□□□ -0.47
ATPAF2-207ENST00000488753 DGAT2Q96PD7 388 aa12.11□□□□□ -0.47
ATPAF2-207ENST00000488753 FAM173AQ9BQD7 235 aa12.11□□□□□ -0.47
ATPAF2-207ENST00000488753 PELOQ9BRX2 385 aaKnown RBP12.11□□□□□ -0.47
ATPAF2-207ENST00000488753 TRIM8Q9BZR9 551 aa12.11□□□□□ -0.47
ATPAF2-207ENST00000488753 TSPYL1Q9H0U9 437 aa12.11□□□□□ -0.47
ATPAF2-207ENST00000488753 ACSS3Q9H6R3 686 aa12.11□□□□□ -0.47
ATPAF2-207ENST00000488753 ZDHHC11Q9H8X9 412 aa12.11□□□□□ -0.47
ATPAF2-207ENST00000488753 LIN28AQ9H9Z2 209 aaKnown RBP12.11□□□□□ -0.47
ATPAF2-207ENST00000488753 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.11□□□□□ -0.47
ATPAF2-207ENST00000488753 PCNX1Q96RV3 2341 aa12.11□□□□□ -0.47
ATPAF2-207ENST00000488753 APCP25054 2843 aa12.1□□□□□ -0.47
ATPAF2-207ENST00000488753 OR14I1A6ND48 311 aa12.1□□□□□ -0.47
ATPAF2-207ENST00000488753 KIF2AO00139 706 aaPredicted RBP12.1□□□□□ -0.47
ATPAF2-207ENST00000488753 FOXE1O00358 373 aaPredicted RBP12.1□□□□□ -0.47
ATPAF2-207ENST00000488753 SAP18O00422 153 aaKnown RBP12.1□□□□□ -0.47
ATPAF2-207ENST00000488753 GLSO94925 669 aaPredicted RBP12.1□□□□□ -0.47
ATPAF2-207ENST00000488753 ALDOAP04075 364 aaKnown RBP12.1□□□□□ -0.47
ATPAF2-207ENST00000488753 IGKV3-11P04433 115 aa12.1□□□□□ -0.47
ATPAF2-207ENST00000488753 CNR1P21554 472 aa12.1□□□□□ -0.47
ATPAF2-207ENST00000488753 TYK2P29597 1187 aa12.1□□□□□ -0.47
ATPAF2-207ENST00000488753 BUD31P41223 144 aaPredicted RBP12.1□□□□□ -0.47
ATPAF2-207ENST00000488753 PPIAP62937 165 aaKnown RBP12.1□□□□□ -0.47
ATPAF2-207ENST00000488753 IRF9Q00978 393 aa12.1□□□□□ -0.47
ATPAF2-207ENST00000488753 SLC7A5Q01650 507 aa12.1□□□□□ -0.47
ATPAF2-207ENST00000488753 PLGLB1Q02325 96 aa12.1□□□□□ -0.47
ATPAF2-207ENST00000488753 ID2Q02363 134 aa12.1□□□□□ -0.47
ATPAF2-207ENST00000488753 TBL3Q12788 808 aaKnown RBP12.1□□□□□ -0.47
ATPAF2-207ENST00000488753 DDX39BQ13838 428 aaKnown RBP12.1□□□□□ -0.47
ATPAF2-207ENST00000488753 GTF2H2Q13888 395 aa12.1□□□□□ -0.47
ATPAF2-207ENST00000488753 CDSNQ15517 529 aa12.1□□□□□ -0.47
ATPAF2-207ENST00000488753 WHAMMP3Q1A5X7 153 aa12.1□□□□□ -0.47
ATPAF2-207ENST00000488753 HYAL4Q2M3T9 481 aa12.1□□□□□ -0.47
ATPAF2-207ENST00000488753 C10orf62Q5T681 223 aaPredicted RBP12.1□□□□□ -0.47
ATPAF2-207ENST00000488753 GTF2H2CQ6P1K8 395 aa12.1□□□□□ -0.47
ATPAF2-207ENST00000488753 CD163Q86VB7 1156 aa12.1□□□□□ -0.47
ATPAF2-207ENST00000488753 DND1Q8IYX4 353 aaKnown RBP12.1□□□□□ -0.47
ATPAF2-207ENST00000488753 ST13P4Q8IZP2 240 aaPredicted RBP12.1□□□□□ -0.47
ATPAF2-207ENST00000488753 SLC15A4Q8N697 577 aa12.1□□□□□ -0.47
ATPAF2-207ENST00000488753 ZNF321PQ8N8H1 164 aa12.1□□□□□ -0.47
ATPAF2-207ENST00000488753 L3MBTL4Q8NA19 623 aa12.1□□□□□ -0.47
ATPAF2-207ENST00000488753 ACBD4Q8NC06 268 aa12.1□□□□□ -0.47
ATPAF2-207ENST00000488753 CA5BP1Q8WTZ4 195 aa12.1□□□□□ -0.47
ATPAF2-207ENST00000488753 ISL2Q96A47 359 aa12.1□□□□□ -0.47
ATPAF2-207ENST00000488753 SENP5Q96HI0 755 aaPredicted RBP12.1□□□□□ -0.47
ATPAF2-207ENST00000488753 FBXL20Q96IG2 436 aa12.1□□□□□ -0.47
ATPAF2-207ENST00000488753 SCYL1Q96KG9 808 aa12.1□□□□□ -0.47
ATPAF2-207ENST00000488753 GPR78Q96P69 363 aa12.1□□□□□ -0.47
ATPAF2-207ENST00000488753 MTERF1Q99551 399 aaKnown RBP12.1□□□□□ -0.47
ATPAF2-207ENST00000488753 SPOCK3Q9BQ16 436 aa12.1□□□□□ -0.47
ATPAF2-207ENST00000488753 LRRC1Q9BTT6 524 aa12.1□□□□□ -0.47
ATPAF2-207ENST00000488753 ZNF717Q9BY31 904 aaPredicted RBP12.1□□□□□ -0.47
ATPAF2-207ENST00000488753 FUT8Q9BYC5 575 aa12.1□□□□□ -0.47
ATPAF2-207ENST00000488753 TP63Q9H3D4 680 aaPredicted RBP12.1□□□□□ -0.47
ATPAF2-207ENST00000488753 DDX31Q9H8H2 851 aaKnown RBP12.1□□□□□ -0.47
ATPAF2-207ENST00000488753 IL1RL2Q9HB29 575 aa12.1□□□□□ -0.47
ATPAF2-207ENST00000488753 LYARQ9NX58 379 aaKnown RBP12.1□□□□□ -0.47
ATPAF2-207ENST00000488753 FBN2P35556 2912 aa12.09□□□□□ -0.47
ATPAF2-207ENST00000488753 A0A0A6YYD5 115 aa12.09□□□□□ -0.47
ATPAF2-207ENST00000488753 MYOCOSA0A1B0GUC4 107 aa12.09□□□□□ -0.47
ATPAF2-207ENST00000488753 PINLYPA6NC86 204 aa12.09□□□□□ -0.47
ATPAF2-207ENST00000488753 ZNHIT1O43257 154 aa12.09□□□□□ -0.47
ATPAF2-207ENST00000488753 PROM1O43490 865 aa12.09□□□□□ -0.47
ATPAF2-207ENST00000488753 SH3BGRLO75368 114 aa12.09□□□□□ -0.47
ATPAF2-207ENST00000488753 SEMA3DO95025 777 aa12.09□□□□□ -0.47
ATPAF2-207ENST00000488753 IGHG3P01860 377 aa12.09□□□□□ -0.47
ATPAF2-207ENST00000488753 P04436 131 aa12.09□□□□□ -0.47
ATPAF2-207ENST00000488753 ALOX15P16050 662 aaPredicted RBP12.09□□□□□ -0.47
ATPAF2-207ENST00000488753 ELAVL4P26378 380 aaKnown RBP12.09□□□□□ -0.47
ATPAF2-207ENST00000488753 SSTR2P30874 369 aa12.09□□□□□ -0.47
ATPAF2-207ENST00000488753 GALNSP34059 522 aa12.09□□□□□ -0.47
ATPAF2-207ENST00000488753 FOLH1Q04609 750 aa12.09□□□□□ -0.47
ATPAF2-207ENST00000488753 SPRED3Q2MJR0 410 aa12.09□□□□□ -0.47
ATPAF2-207ENST00000488753 PIGGQ5H8A4 983 aa12.09□□□□□ -0.47
ATPAF2-207ENST00000488753 C18orf63Q68DL7 685 aa12.09□□□□□ -0.47
ATPAF2-207ENST00000488753 MRM1Q6IN84 353 aaKnown RBP12.09□□□□□ -0.47
ATPAF2-207ENST00000488753 C3P1Q6ZMU1 363 aa12.09□□□□□ -0.47
ATPAF2-207ENST00000488753 GOLGA7Q7Z5G4 137 aa12.09□□□□□ -0.47
ATPAF2-207ENST00000488753 FAM109AQ8N4B1 249 aa12.09□□□□□ -0.47
ATPAF2-207ENST00000488753 SLC22A8Q8TCC7 542 aa12.09□□□□□ -0.47
ATPAF2-207ENST00000488753 ASB5Q8WWX0 329 aa12.09□□□□□ -0.47
ATPAF2-207ENST00000488753 SDCCAG3Q96C92 435 aa12.09□□□□□ -0.47
ATPAF2-207ENST00000488753 SORBS1Q9BX66 1292 aaKnown RBP12.09□□□□□ -0.47
ATPAF2-207ENST00000488753 TTTY12Q9BZ98 90 aa12.09□□□□□ -0.47
ATPAF2-207ENST00000488753 ENKD1Q9H0I2 346 aa12.09□□□□□ -0.47
ATPAF2-207ENST00000488753 IPPKQ9H8X2 491 aa12.09□□□□□ -0.47
ATPAF2-207ENST00000488753 SACM1LQ9NTJ5 587 aa12.09□□□□□ -0.47
ATPAF2-207ENST00000488753 NINJ2Q9NZG7 142 aa12.09□□□□□ -0.47
ATPAF2-207ENST00000488753 MTRF1LQ9UGC7 380 aaKnown RBP12.09□□□□□ -0.47
ATPAF2-207ENST00000488753 TMCO1Q9UM00 188 aa12.09□□□□□ -0.47
ATPAF2-207ENST00000488753 ATG4BQ9Y4P1 393 aa12.09□□□□□ -0.47
ATPAF2-207ENST00000488753 CSMD2Q7Z408 3487 aa12.09□□□□□ -0.47
ATPAF2-207ENST00000488753 PKDREJQ9NTG1 2253 aa12.09□□□□□ -0.47
ATPAF2-207ENST00000488753 A0A1B0GVC2 190 aa12.08□□□□□ -0.48
ATPAF2-207ENST00000488753 FAM166BA8MTA8 275 aa12.08□□□□□ -0.48
ATPAF2-207ENST00000488753 BCKDKO14874 412 aa12.08□□□□□ -0.48
ATPAF2-207ENST00000488753 GPR75O95800 540 aa12.08□□□□□ -0.48
ATPAF2-207ENST00000488753 SNRPB2P08579 225 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms