RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 IL10RBQ08334 325 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 SGCGQ13326 291 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 ITGB3BPQ13352 177 aaPredicted RBP3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 TRIM29Q14134 588 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 EXT1Q16394 746 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 HLA-BQ31612 363 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 CCDC153Q494R4 210 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 CCDC14Q49A88 953 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 C14orf177Q52M58 125 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 TTMPQ5BVD1 217 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 CFAP157Q5JU67 520 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 AGBL2Q5U5Z8 902 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 BSPRYQ5W0U4 402 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 THOC7Q6I9Y2 204 aaKnown RBP3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 RAB12Q6IQ22 244 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 NEPROQ6NW34 567 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 TTC27Q6P3X3 843 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 FUT10Q6P4F1 479 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 IYDQ6PHW0 289 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 CNSTQ6PJW8 725 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 IL17RELQ6ZVW7 336 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 RAPH1Q70E73 1250 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 FCRLAQ7L513 359 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 PIGWQ7Z7B1 504 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 CROCCP3Q8IVE0 287 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 SYCP3Q8IZU3 236 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 C10orf53Q8N6V4 93 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 LRTM2Q8N967 370 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 OR7G3Q8NG95 312 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 OR4C15Q8NGM1 316 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 MAPK15Q8TD08 544 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 AGAP11Q8TF27 550 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 GIMAP1Q8WWP7 306 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 PIK3R3Q92569 461 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 WBP2Q969T9 261 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 ZNF486Q96H40 463 aaPredicted RBP3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 ATP6V1G3Q96LB4 118 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 CATSPER2Q96P56 530 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 KLHL5Q96PQ7 755 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 SH3GL1Q99961 368 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 PIGQQ9BRB3 760 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 TCHPQ9BT92 498 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 TMEM165Q9HC07 324 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 IL1RAPL2Q9NP60 686 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 EXOC1Q9NV70 894 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 TMEM161AQ9NX61 479 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 AATFQ9NY61 560 aaKnown RBP eCLIP3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 SLCO1C1Q9NYB5 712 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 HOXC10Q9NYD6 342 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 MIS18AQ9NYP9 233 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 RNF14Q9UBS8 474 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 SLC12A6Q9UHW9 1150 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 PCDHGA1Q9Y5H4 931 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 NEDD4P46934 1319 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 MYH14Q7Z406 1995 aaKnown RBP3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 NSD3Q9BZ95 1437 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 TRPM2O94759 1503 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 CEP170BQ9Y4F5 1589 aaPredicted RBP3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 ZCCHC11Q5TAX3 1644 aaKnown RBP3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 SMIM31A0A1B0GVY4 71 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 ILVBLA1L0T0 632 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 VPS37CA5D8V6 355 aaPredicted RBP3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 ZNF263O14978 683 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 LSM1O15116 133 aaKnown RBP3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 TEX28O15482 410 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 ARHGEF9O43307 516 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 ECE2O60344 883 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 PRAF2O60831 178 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 MTRF1O75570 445 aaKnown RBP3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 B3GALNT1O75752 331 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 RAD51DO75771 328 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 YEATS4O95619 227 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 RHOXF2BP0C7M4 288 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 THEGLP0DJG4 465 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 C8orf89P0DMQ9 161 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 EEF2P13639 858 aaKnown RBP3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 NQO1P15559 274 aaKnown RBP3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 STMN1P16949 149 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 TYMPP19971 482 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 MMP12P39900 470 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 OPRL1P41146 370 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 FRKP42685 505 aaPredicted RBP3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 IER3P46695 156 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 ARPC4P59998 168 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 STX1BP61266 288 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 ST8SIA6P61647 398 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 ASIC1P78348 528 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 UBXN1Q04323 297 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 TMEM132DQ14C87 1099 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 PPP1R7Q15435 360 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 TAZQ16635 292 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 PARP6Q2NL67 630 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 SMU1Q2TAY7 513 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 GLRA4Q5JXX5 417 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 ZC2HC1BQ5TFG8 222 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 SLC24A5Q71RS6 500 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 ASRGL1Q7L266 308 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 GPR141Q7Z602 305 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 SIAH3Q8IW03 269 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 CCDC60Q8IWA6 550 aaPredicted RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms