RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 IGHV3-20A0A0C4DH32 117 aa3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 OR5H15A6NDH6 313 aa3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 TRIM49BA6NDI0 452 aa3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 A8MU76 341 aa3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 E9PQ18 207 aa3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 H0YIG0 161 aa3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 FBP2O00757 339 aa3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 CFLARO15519 480 aa3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 TLX2O43763 284 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 CSDE1O75534 798 aaKnown RBP3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 OR6A2O95222 327 aa3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 APRTP07741 180 aa3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 HMOX1P09601 288 aa3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 UGT1A6P19224 532 aa3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 GJB2P29033 226 aa3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 PPP2R1BP30154 601 aa3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 AP1B1Q10567 949 aa3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 PPP2R5CQ13362 524 aa3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 OR1C1Q15619 314 aa3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 CARTPTQ16568 116 aa3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 KNOP1Q1ED39 458 aaKnown RBP3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 KRTAP13-3Q3SY46 172 aa3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 AGAP7PQ5VUJ5 663 aa3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 LIPJQ5W064 366 aa3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 SEL1L3Q68CR1 1132 aa3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 HIST2H2AA3Q6FI13 130 aa3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 CAPN13Q6MZZ7 669 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 PAQR6Q6TCH4 344 aa3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 Q6ZRG5 221 aa3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 MIER3Q7Z3K6 550 aa3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 CACUL1Q86Y37 369 aa3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 SERPINA12Q8IW75 414 aa3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 STHQ8IWL8 128 aa3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 FBXW8Q8N3Y1 598 aa3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 RTL3Q8N8U3 475 aaKnown RBP3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 OR4A16Q8NH70 328 aa3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 CHPT1Q8WUD6 406 aa3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 UBE2Q2Q8WVN8 375 aa3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 RASL10AQ92737 203 aa3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 FAM46BQ96A09 425 aa3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 ESAMQ96AP7 390 aa3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 ERGIC2Q96RQ1 377 aa3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 RAB40CQ96S21 281 aa3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 RUFY1Q96T51 708 aa3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 PYGO2Q9BRQ0 406 aa3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 NACA2Q9H009 215 aa3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 TUBB1Q9H4B7 451 aa3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 DPEP3Q9H4B8 488 aa3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 THAP9Q9H5L6 903 aa3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 GDF3Q9NR23 364 aa3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 HOMER3Q9NSC5 361 aa3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 DEPPQ9NTK1 212 aa3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 THYN1Q9P016 225 aa3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 OR1A2Q9Y585 309 aa3.11□□□□□ -1.91
HMGB1P36-201ENST00000487709 TRGV8A0A0C4DH27 118 aa3.1□□□□□ -1.91
HMGB1P36-201ENST00000487709 IGHV3-38A0A0C4DH36 116 aa3.1□□□□□ -1.91
HMGB1P36-201ENST00000487709 MEX3AA1L020 520 aaKnown RBP3.1□□□□□ -1.91
HMGB1P36-201ENST00000487709 IGLON5A6NGN9 336 aa3.1□□□□□ -1.91
HMGB1P36-201ENST00000487709 ARHGAP42A6NI28 874 aa3.1□□□□□ -1.91
HMGB1P36-201ENST00000487709 MEI4A8MW99 385 aa3.1□□□□□ -1.91
HMGB1P36-201ENST00000487709 NEDD8-MDP1E9PL57 170 aa3.1□□□□□ -1.91
HMGB1P36-201ENST00000487709 ZNF749O43361 778 aa3.1□□□□□ -1.91
HMGB1P36-201ENST00000487709 SORBS2O94875 1100 aaKnown RBP3.1□□□□□ -1.91
HMGB1P36-201ENST00000487709 OLFM2O95897 454 aa3.1□□□□□ -1.91
HMGB1P36-201ENST00000487709 GSTA1P08263 222 aa3.1□□□□□ -1.91
HMGB1P36-201ENST00000487709 ABHD2P08910 425 aa3.1□□□□□ -1.91
HMGB1P36-201ENST00000487709 HIST1H2AGP0C0S8 130 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P36-201ENST00000487709 CCDC192P0DO97 292 aa3.1□□□□□ -1.91
HMGB1P36-201ENST00000487709 SPRP35270 261 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P36-201ENST00000487709 RPL34P49207 117 aaKnown RBP3.1□□□□□ -1.91
HMGB1P36-201ENST00000487709 UCP2P55851 309 aa3.1□□□□□ -1.91
HMGB1P36-201ENST00000487709 MFGE8Q08431 387 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P36-201ENST00000487709 NME3Q13232 169 aa3.1□□□□□ -1.91
HMGB1P36-201ENST00000487709 ZNF146Q15072 292 aa3.1□□□□□ -1.91
HMGB1P36-201ENST00000487709 LPAL2Q16609 132 aa3.1□□□□□ -1.91
HMGB1P36-201ENST00000487709 SHROOM1Q2M3G4 852 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P36-201ENST00000487709 ASRGL1Q7L266 308 aa3.1□□□□□ -1.91
HMGB1P36-201ENST00000487709 KCNMB4Q86W47 210 aa3.1□□□□□ -1.91
HMGB1P36-201ENST00000487709 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P36-201ENST00000487709 LYG1Q8N1E2 194 aa3.1□□□□□ -1.91
HMGB1P36-201ENST00000487709 COLGALT1Q8NBJ5 622 aa3.1□□□□□ -1.91
HMGB1P36-201ENST00000487709 MAPK1IP1LQ8NDC0 245 aa3.1□□□□□ -1.91
HMGB1P36-201ENST00000487709 PRSS33Q8NF86 280 aa3.1□□□□□ -1.91
HMGB1P36-201ENST00000487709 RDH11Q8TC12 318 aa3.1□□□□□ -1.91
HMGB1P36-201ENST00000487709 FBXO25Q8TCJ0 367 aa3.1□□□□□ -1.91
HMGB1P36-201ENST00000487709 CD99L2Q8TCZ2 262 aa3.1□□□□□ -1.91
HMGB1P36-201ENST00000487709 HIST1H2ACQ93077 130 aa3.1□□□□□ -1.91
HMGB1P36-201ENST00000487709 MRPL24Q96A35 216 aaKnown RBP3.1□□□□□ -1.91
HMGB1P36-201ENST00000487709 C16orf58Q96GQ5 468 aa3.1□□□□□ -1.91
HMGB1P36-201ENST00000487709 CXorf58Q96LI9 332 aa3.1□□□□□ -1.91
HMGB1P36-201ENST00000487709 ZNF597Q96LX8 424 aa3.1□□□□□ -1.91
HMGB1P36-201ENST00000487709 ZNF560Q96MR9 790 aa3.1□□□□□ -1.91
HMGB1P36-201ENST00000487709 ATP6V0BQ99437 205 aa3.1□□□□□ -1.91
HMGB1P36-201ENST00000487709 FUNDC2Q9BWH2 189 aa3.1□□□□□ -1.91
HMGB1P36-201ENST00000487709 ACPTQ9BZG2 426 aa3.1□□□□□ -1.91
HMGB1P36-201ENST00000487709 LRRCC1Q9C099 1032 aa3.1□□□□□ -1.91
HMGB1P36-201ENST00000487709 ASIC3Q9UHC3 531 aa3.1□□□□□ -1.91
HMGB1P36-201ENST00000487709 IL19Q9UHD0 177 aa3.1□□□□□ -1.91
HMGB1P36-201ENST00000487709 CIDEBQ9UHD4 219 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms