RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 LRP4O75096 1905 aa5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 PLXNB3Q9ULL4 1909 aa5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 A0A1W2PQM1 296 aa5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 SLC5A10A0PJK1 596 aa5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 TMEM8BA6NDV4 472 aa5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 OR52A4PA6NMU1 304 aa5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 PRMT5O14744 637 aaPredicted RBP5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 EIF3HO15372 352 aaKnown RBP eCLIP5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 HNRNPRO43390 633 aaKnown RBP5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 KCNJ13O60928 360 aa5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 NDUFS3O75489 264 aa5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 JTBO76095 146 aa5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 AP2A2O94973 939 aa5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 TRIM16O95361 564 aa5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 TTC4O95801 387 aa5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 C1QAP02745 245 aa5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 RHOXF2BP0C7M4 288 aa5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 OR56A5P0C7T3 313 aa5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 F3P13726 295 aa5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 ITGB6P18564 788 aa5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 XRCC1P18887 633 aaPredicted RBP5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 FMO4P31512 558 aa5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 SLC1A2P43004 574 aa5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 MAGEA4P43358 317 aa5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 LEPRP48357 1165 aaKnown RBP5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 TTPAP49638 278 aa5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 UBE2IP63279 158 aaKnown RBP5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 CCL7P80098 99 aa5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 MPP1Q00013 466 aa5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 CAV1Q03135 178 aa5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 CFHR1Q03591 330 aa5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 THOC5Q13769 683 aaKnown RBP5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 C14orf28Q4W4Y0 310 aa5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 CTSL3PQ5NE16 218 aa5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 DNTTIP2Q5QJE6 756 aaKnown RBP5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 UBAP2Q5T6F2 1119 aaKnown RBP5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 CAPRIN2Q6IMN6 1127 aaKnown RBP5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 DHRS13Q6UX07 377 aa5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 C3orf62Q6ZUJ4 267 aa5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 EFL1Q7Z2Z2 1120 aaKnown RBP5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 SDCCAG8Q86SQ7 713 aaPredicted RBP5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 GGNQ86UU5 652 aa5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 KCNMB4Q86W47 210 aa5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 LDLRAD3Q86YD5 345 aa5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 ESX1Q8N693 406 aa5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 Q8N9G6 341 aaPredicted RBP5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 TEX19Q8NA77 164 aa5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 SRFBP1Q8NEF9 429 aaKnown RBP5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 SLC37A2Q8TED4 501 aa5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 PYROXD1Q8WU10 500 aa5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 CERS2Q96G23 380 aa5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 CFAP36Q96G28 342 aa5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 C9orf72Q96LT7 481 aa5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 TIMP4Q99727 224 aa5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 NRTNQ99748 197 aa5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 CCDC3Q9BQI4 270 aa5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 RHOXF2Q9BQY4 288 aa5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 NAT9Q9BTE0 207 aa5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 WWP1Q9H0M0 922 aa5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 KLK15Q9H2R5 256 aa5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 FBXO6Q9NRD1 293 aaPredicted RBP5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 SMYD2Q9NRG4 433 aa5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 FAM114A2Q9NRY5 505 aa5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 FBXO5Q9UKT4 447 aa5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 HEMK1Q9Y5R4 338 aaPredicted RBP5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 COPG1Q9Y678 874 aaKnown RBP5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 TP53BP1Q12888 1972 aaPredicted RBP5.95□□□□□ -1.46
RTFDC1-209ENST00000487211 RP1P56715 2156 aa5.94□□□□□ -1.46
RTFDC1-209ENST00000487211 KIR2DS5A0A0G2JLQ3 304 aa5.94□□□□□ -1.46
RTFDC1-209ENST00000487211 A0A0G2JNG1 304 aa5.94□□□□□ -1.46
RTFDC1-209ENST00000487211 OR5K4A6NMS3 321 aa5.94□□□□□ -1.46
RTFDC1-209ENST00000487211 PDZK1P1A8MUH7 402 aa5.94□□□□□ -1.46
RTFDC1-209ENST00000487211 H7C1Q1 480 aa5.94□□□□□ -1.46
RTFDC1-209ENST00000487211 J3QKU1 62 aa5.94□□□□□ -1.46
RTFDC1-209ENST00000487211 KIR2DS3K7RE56 304 aa5.94□□□□□ -1.46
RTFDC1-209ENST00000487211 NTN3O00634 580 aaPredicted RBP5.94□□□□□ -1.46
RTFDC1-209ENST00000487211 NDC80O14777 642 aa5.94□□□□□ -1.46
RTFDC1-209ENST00000487211 NUDT21O43809 227 aaKnown RBP5.94□□□□□ -1.46
RTFDC1-209ENST00000487211 NIPSNAP2O75323 286 aa5.94□□□□□ -1.46
RTFDC1-209ENST00000487211 GPC4O75487 556 aa5.94□□□□□ -1.46
RTFDC1-209ENST00000487211 GP1BAP07359 652 aa5.94□□□□□ -1.46
RTFDC1-209ENST00000487211 PKMP14618 531 aaKnown RBP5.94□□□□□ -1.46
RTFDC1-209ENST00000487211 VCLP18206 1134 aa5.94□□□□□ -1.46
RTFDC1-209ENST00000487211 OGNP20774 298 aaKnown RBP5.94□□□□□ -1.46
RTFDC1-209ENST00000487211 RPS3P23396 243 aaKnown RBP eCLIP5.94□□□□□ -1.462e-6■□□□□ 9.8
RTFDC1-209ENST00000487211 ACADLP28330 430 aa5.94□□□□□ -1.46
RTFDC1-209ENST00000487211 NDUFS1P28331 727 aa5.94□□□□□ -1.46
RTFDC1-209ENST00000487211 CD1CP29017 333 aa5.94□□□□□ -1.46
RTFDC1-209ENST00000487211 ALDH4A1P30038 563 aa5.94□□□□□ -1.46
RTFDC1-209ENST00000487211 PPARGP37231 505 aaPredicted RBP5.94□□□□□ -1.46
RTFDC1-209ENST00000487211 ABCG1P45844 678 aa5.94□□□□□ -1.46
RTFDC1-209ENST00000487211 FASLGP48023 281 aa5.94□□□□□ -1.46
RTFDC1-209ENST00000487211 DUSP3P51452 185 aaPredicted RBP5.94□□□□□ -1.46
RTFDC1-209ENST00000487211 PGGT1BP53609 377 aa5.94□□□□□ -1.46
RTFDC1-209ENST00000487211 CSE1LP55060 971 aaKnown RBP5.94□□□□□ -1.46
RTFDC1-209ENST00000487211 ADARP55265 1226 aaKnown RBP5.94□□□□□ -1.46
RTFDC1-209ENST00000487211 EIF3BP55884 814 aaKnown RBP5.94□□□□□ -1.46
RTFDC1-209ENST00000487211 OR1D5P58170 312 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms