RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 ARFIP1P53367 373 aa9.55□□□□□ -0.88
NEK4-204ENST00000487068 PLIN5Q00G26 463 aa9.55□□□□□ -0.88
NEK4-204ENST00000487068 FOLH1Q04609 750 aa9.55□□□□□ -0.88
NEK4-204ENST00000487068 SLC18A2Q05940 514 aa9.55□□□□□ -0.88
NEK4-204ENST00000487068 BTKQ06187 659 aa9.55□□□□□ -0.88
NEK4-204ENST00000487068 ACSM2AQ08AH3 577 aa9.55□□□□□ -0.88
NEK4-204ENST00000487068 ZNF169Q14929 603 aaPredicted RBP9.55□□□□□ -0.88
NEK4-204ENST00000487068 TLR1Q15399 786 aa9.55□□□□□ -0.88
NEK4-204ENST00000487068 ELAVL1Q15717 326 aaKnown RBP9.55□□□□□ -0.88
NEK4-204ENST00000487068 MEP1AQ16819 746 aa9.55□□□□□ -0.88
NEK4-204ENST00000487068 PRR30Q53SZ7 412 aaPredicted RBP9.55□□□□□ -0.88
NEK4-204ENST00000487068 SPDYAQ5MJ70 313 aa9.55□□□□□ -0.88
NEK4-204ENST00000487068 ACSM2BQ68CK6 577 aa9.55□□□□□ -0.88
NEK4-204ENST00000487068 OR52E8Q6IFG1 317 aa9.55□□□□□ -0.88
NEK4-204ENST00000487068 SCIMPQ6UWF3 145 aa9.55□□□□□ -0.88
NEK4-204ENST00000487068 IGFL3Q6UXB1 125 aa9.55□□□□□ -0.88
NEK4-204ENST00000487068 SH2D5Q6ZV89 423 aa9.55□□□□□ -0.88
NEK4-204ENST00000487068 COMMD6Q7Z4G1 85 aa9.55□□□□□ -0.88
NEK4-204ENST00000487068 CROCCP2Q86T23 111 aa9.55□□□□□ -0.88
NEK4-204ENST00000487068 ATCAYQ86WG3 371 aa9.55□□□□□ -0.88
NEK4-204ENST00000487068 OR4N5Q8IXE1 308 aa9.55□□□□□ -0.88
NEK4-204ENST00000487068 BEST3Q8N1M1 668 aa9.55□□□□□ -0.88
NEK4-204ENST00000487068 TMEM132CQ8N3T6 1108 aa9.55□□□□□ -0.88
NEK4-204ENST00000487068 KIF2BQ8N4N8 673 aa9.55□□□□□ -0.88
NEK4-204ENST00000487068 C1orf52Q8N6N3 182 aaKnown RBP9.55□□□□□ -0.88
NEK4-204ENST00000487068 B3GNT7Q8NFL0 401 aa9.55□□□□□ -0.88
NEK4-204ENST00000487068 OR1N1Q8NGS0 311 aa9.55□□□□□ -0.88
NEK4-204ENST00000487068 OR14A16Q8NHC5 309 aa9.55□□□□□ -0.88
NEK4-204ENST00000487068 DAZLQ92904 295 aaKnown RBP9.55□□□□□ -0.88
NEK4-204ENST00000487068 NCLNQ969V3 563 aa9.55□□□□□ -0.88
NEK4-204ENST00000487068 VMP1Q96GC9 406 aa9.55□□□□□ -0.88
NEK4-204ENST00000487068 ZIM3Q96PE6 472 aa9.55□□□□□ -0.88
NEK4-204ENST00000487068 MECRQ9BV79 373 aa9.55□□□□□ -0.88
NEK4-204ENST00000487068 OR8D2Q9GZM6 311 aa9.55□□□□□ -0.88
NEK4-204ENST00000487068 DDX31Q9H8H2 851 aaKnown RBP9.55□□□□□ -0.88
NEK4-204ENST00000487068 OXSMQ9NWU1 459 aa9.55□□□□□ -0.88
NEK4-204ENST00000487068 TEX10Q9NXF1 929 aaPredicted RBP9.55□□□□□ -0.88
NEK4-204ENST00000487068 ANKRD10Q9NXR5 420 aa9.55□□□□□ -0.88
NEK4-204ENST00000487068 PLA2G3Q9NZ20 509 aa9.55□□□□□ -0.88
NEK4-204ENST00000487068 STMN3Q9NZ72 180 aa9.55□□□□□ -0.88
NEK4-204ENST00000487068 KCMF1Q9P0J7 381 aa9.55□□□□□ -0.88
NEK4-204ENST00000487068 VPS29Q9UBQ0 182 aa9.55□□□□□ -0.88
NEK4-204ENST00000487068 COPS7AQ9UBW8 275 aa9.55□□□□□ -0.88
NEK4-204ENST00000487068 ZNF225Q9UK10 706 aa9.55□□□□□ -0.88
NEK4-204ENST00000487068 PPT2Q9UMR5 302 aa9.55□□□□□ -0.88
NEK4-204ENST00000487068 PLLPQ9Y342 182 aa9.55□□□□□ -0.88
NEK4-204ENST00000487068 ATG4BQ9Y4P1 393 aa9.55□□□□□ -0.88
NEK4-204ENST00000487068 OR5H15A6NDH6 313 aa9.54□□□□□ -0.88
NEK4-204ENST00000487068 GABRR3A8MPY1 467 aa9.54□□□□□ -0.88
NEK4-204ENST00000487068 H3BQF6 201 aa9.54□□□□□ -0.88
NEK4-204ENST00000487068 PCDH7O60245 1069 aa9.54□□□□□ -0.88
NEK4-204ENST00000487068 TRIM13O60858 407 aa9.54□□□□□ -0.88
NEK4-204ENST00000487068 GUCY1B2O75343 617 aa9.54□□□□□ -0.88
NEK4-204ENST00000487068 VPS4BO75351 444 aa9.54□□□□□ -0.88
NEK4-204ENST00000487068 SORBS2O94875 1100 aaKnown RBP9.54□□□□□ -0.88
NEK4-204ENST00000487068 CHEK2O96017 543 aa9.54□□□□□ -0.88
NEK4-204ENST00000487068 NEFHP12036 1026 aa9.54□□□□□ -0.88
NEK4-204ENST00000487068 HSD3B1P14060 373 aa9.54□□□□□ -0.88
NEK4-204ENST00000487068 HSD3B2P26439 372 aa9.54□□□□□ -0.88
NEK4-204ENST00000487068 PIK3R1P27986 724 aa9.54□□□□□ -0.88
NEK4-204ENST00000487068 ALDH3A1P30838 453 aa9.54□□□□□ -0.88
NEK4-204ENST00000487068 DNAJB13P59910 316 aa9.54□□□□□ -0.88
NEK4-204ENST00000487068 HMGCS1Q01581 520 aa9.54□□□□□ -0.88
NEK4-204ENST00000487068 TERF2Q15554 542 aa9.54□□□□□ -0.88
NEK4-204ENST00000487068 INPP5JQ15735 1006 aaPredicted RBP9.54□□□□□ -0.88
NEK4-204ENST00000487068 PLEKHN1Q494U1 663 aaPredicted RBP9.54□□□□□ -0.88
NEK4-204ENST00000487068 SPIN4Q56A73 249 aa9.54□□□□□ -0.88
NEK4-204ENST00000487068 ACER2Q5QJU3 275 aa9.54□□□□□ -0.88
NEK4-204ENST00000487068 NDUFAF5Q5TEU4 345 aa9.54□□□□□ -0.88
NEK4-204ENST00000487068 ZCCHC23Q6ZST2 131 aa9.54□□□□□ -0.88
NEK4-204ENST00000487068 METTL4Q8N3J2 472 aa9.54□□□□□ -0.88
NEK4-204ENST00000487068 GBP7Q8N8V2 638 aaPredicted RBP9.54□□□□□ -0.88
NEK4-204ENST00000487068 AGR3Q8TD06 166 aa9.54□□□□□ -0.88
NEK4-204ENST00000487068 PSMF1Q92530 271 aa9.54□□□□□ -0.88
NEK4-204ENST00000487068 LMF1Q96S06 567 aa9.54□□□□□ -0.88
NEK4-204ENST00000487068 UTP23Q9BRU9 249 aaKnown RBP9.54□□□□□ -0.88
NEK4-204ENST00000487068 CNPPD1Q9BV87 410 aa9.54□□□□□ -0.88
NEK4-204ENST00000487068 EBPLQ9BY08 206 aa9.54□□□□□ -0.88
NEK4-204ENST00000487068 ZNF717Q9BY31 904 aaPredicted RBP9.54□□□□□ -0.88
NEK4-204ENST00000487068 STMN4Q9H169 189 aaPredicted RBP9.54□□□□□ -0.88
NEK4-204ENST00000487068 CDCP1Q9H5V8 836 aa9.54□□□□□ -0.88
NEK4-204ENST00000487068 KCNK9Q9NPC2 374 aa9.54□□□□□ -0.88
NEK4-204ENST00000487068 PFDN4Q9NQP4 134 aa9.54□□□□□ -0.88
NEK4-204ENST00000487068 PSD3Q9NYI0 1048 aa9.54□□□□□ -0.88
NEK4-204ENST00000487068 ADAM29Q9UKF5 820 aa9.54□□□□□ -0.88
NEK4-204ENST00000487068 VPS4AQ9UN37 437 aa9.54□□□□□ -0.88
NEK4-204ENST00000487068 NBASA2RRP1 2371 aa9.53□□□□□ -0.88
NEK4-204ENST00000487068 TRAV17A0A0B4J275 112 aa9.53□□□□□ -0.88
NEK4-204ENST00000487068 UBFD1O14562 309 aaKnown RBP9.53□□□□□ -0.88
NEK4-204ENST00000487068 CTIFO43310 598 aaKnown RBP9.53□□□□□ -0.88
NEK4-204ENST00000487068 PROM1O43490 865 aa9.53□□□□□ -0.88
NEK4-204ENST00000487068 ERAL1O75616 437 aaKnown RBP9.53□□□□□ -0.88
NEK4-204ENST00000487068 CHN1P15882 459 aa9.53□□□□□ -0.88
NEK4-204ENST00000487068 ALOX15P16050 662 aaPredicted RBP9.53□□□□□ -0.88
NEK4-204ENST00000487068 CREB1P16220 341 aa9.53□□□□□ -0.88
NEK4-204ENST00000487068 TPP2P29144 1249 aaPredicted RBP9.53□□□□□ -0.88
NEK4-204ENST00000487068 STT3AP46977 705 aa9.53□□□□□ -0.88
NEK4-204ENST00000487068 FOXA1P55317 472 aa9.53□□□□□ -0.88
NEK4-204ENST00000487068 IGFBP7Q16270 282 aa9.53□□□□□ -0.88
NEK4-204ENST00000487068 CLEC6AQ6EIG7 209 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms