RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 STT3AP46977 705 aa22.73■■□□□ 1.23
LIME1-206ENST00000487026 ASPHQ12797 758 aa22.73■■□□□ 1.23
LIME1-206ENST00000487026 ACAP2Q15057 778 aa22.73■■□□□ 1.23
LIME1-206ENST00000487026 RTL4Q6ZR62 310 aa22.73■■□□□ 1.23
LIME1-206ENST00000487026 GPR180Q86V85 440 aa22.73■■□□□ 1.23
LIME1-206ENST00000487026 EID3Q8N140 333 aa22.73■■□□□ 1.23
LIME1-206ENST00000487026 OR8K3Q8NH51 312 aa22.73■■□□□ 1.23
LIME1-206ENST00000487026 GPR78Q96P69 363 aa22.73■■□□□ 1.23
LIME1-206ENST00000487026 DGAT2Q96PD7 388 aa22.73■■□□□ 1.23
LIME1-206ENST00000487026 TTTY12Q9BZ98 90 aa22.73■■□□□ 1.23
LIME1-206ENST00000487026 PLSCR2Q9NRY7 297 aa22.73■■□□□ 1.23
LIME1-206ENST00000487026 CPSF2Q9P2I0 782 aaKnown RBP22.73■■□□□ 1.23
LIME1-206ENST00000487026 COPS7AQ9UBW8 275 aa22.73■■□□□ 1.23
LIME1-206ENST00000487026 ADGRE2Q9UHX3 823 aa22.73■■□□□ 1.23
LIME1-206ENST00000487026 CSMD2Q7Z408 3487 aa22.73■■□□□ 1.23
LIME1-206ENST00000487026 TACC2O95359 2948 aa22.72■■□□□ 1.23
LIME1-206ENST00000487026 ZNF407Q9C0G0 2248 aa22.72■■□□□ 1.23
LIME1-206ENST00000487026 KLHL2O95198 593 aa22.72■■□□□ 1.23
LIME1-206ENST00000487026 SIX3O95343 332 aaPredicted RBP22.72■■□□□ 1.23
LIME1-206ENST00000487026 COX7A2P14406 83 aa22.72■■□□□ 1.23
LIME1-206ENST00000487026 CNR1P21554 472 aa22.72■■□□□ 1.23
LIME1-206ENST00000487026 TYK2P29597 1187 aa22.72■■□□□ 1.23
LIME1-206ENST00000487026 ALDH18A1P54886 795 aaKnown RBP22.72■■□□□ 1.23
LIME1-206ENST00000487026 HNRNPH2P55795 449 aaKnown RBP22.72■■□□□ 1.23
LIME1-206ENST00000487026 IGLV3-21P80748 117 aaPredicted RBP22.72■■□□□ 1.23
LIME1-206ENST00000487026 FOLH1Q04609 750 aa22.72■■□□□ 1.23
LIME1-206ENST00000487026 CPSF6Q16630 551 aaKnown RBP eCLIP22.72■■□□□ 1.23
LIME1-206ENST00000487026 EMC4Q5J8M3 183 aa22.72■■□□□ 1.23
LIME1-206ENST00000487026 LIPJQ5W064 366 aa22.72■■□□□ 1.23
LIME1-206ENST00000487026 C8orf74Q6P047 294 aa22.72■■□□□ 1.23
LIME1-206ENST00000487026 ARHGAP11AQ6P4F7 1023 aa22.72■■□□□ 1.23
LIME1-206ENST00000487026 RPRMLQ8N4K4 120 aa22.72■■□□□ 1.23
LIME1-206ENST00000487026 CA5BP1Q8WTZ4 195 aa22.72■■□□□ 1.23
LIME1-206ENST00000487026 RBM18Q96H35 190 aaKnown RBP22.72■■□□□ 1.23
LIME1-206ENST00000487026 VPS11Q9H270 941 aa22.72■■□□□ 1.23
LIME1-206ENST00000487026 RNF11Q9Y3C5 154 aa22.72■■□□□ 1.23
LIME1-206ENST00000487026 PCDHGA11Q9Y5H2 935 aa22.72■■□□□ 1.23
LIME1-206ENST00000487026 EML6Q6ZMW3 1958 aa22.72■■□□□ 1.23
LIME1-206ENST00000487026 OTOGQ6ZRI0 2925 aa22.71■■□□□ 1.23
LIME1-206ENST00000487026 EEDO75530 441 aaKnown RBP22.71■■□□□ 1.23
LIME1-206ENST00000487026 ALDOAP04075 364 aaKnown RBP22.71■■□□□ 1.23
LIME1-206ENST00000487026 PTX3P26022 381 aaPredicted RBP22.71■■□□□ 1.23
LIME1-206ENST00000487026 PIK3CGP48736 1102 aa22.71■■□□□ 1.23
LIME1-206ENST00000487026 NEK2P51955 445 aa22.71■■□□□ 1.23
LIME1-206ENST00000487026 GTF2H2Q13888 395 aa22.71■■□□□ 1.23
LIME1-206ENST00000487026 GTF2H2CQ6P1K8 395 aa22.71■■□□□ 1.23
LIME1-206ENST00000487026 OPN5Q6U736 354 aa22.71■■□□□ 1.23
LIME1-206ENST00000487026 GOLGA7Q7Z5G4 137 aa22.71■■□□□ 1.23
LIME1-206ENST00000487026 C9orf40Q8IXQ3 194 aa22.71■■□□□ 1.23
LIME1-206ENST00000487026 PLD6Q8N2A8 252 aaKnown RBP22.71■■□□□ 1.23
LIME1-206ENST00000487026 TANKQ92844 425 aa22.71■■□□□ 1.23
LIME1-206ENST00000487026 LURAP1Q96LR2 239 aa22.71■■□□□ 1.23
LIME1-206ENST00000487026 CENPKQ9BS16 269 aa22.71■■□□□ 1.23
LIME1-206ENST00000487026 IPPKQ9H8X2 491 aa22.71■■□□□ 1.23
LIME1-206ENST00000487026 ZNF358Q9NW07 568 aa22.71■■□□□ 1.23
LIME1-206ENST00000487026 MS4A12Q9NXJ0 267 aa22.71■■□□□ 1.23
LIME1-206ENST00000487026 NINJ2Q9NZG7 142 aa22.71■■□□□ 1.23
LIME1-206ENST00000487026 COQ3Q9NZJ6 369 aa22.71■■□□□ 1.23
LIME1-206ENST00000487026 GLOD5A6NK44 160 aa22.7■■□□□ 1.22
LIME1-206ENST00000487026 NPIPA2E9PIF3 369 aa22.7■■□□□ 1.22
LIME1-206ENST00000487026 NPIPA3F8WFD2 350 aa22.7■■□□□ 1.22
LIME1-206ENST00000487026 ACOT7O00154 380 aa22.7■■□□□ 1.22
LIME1-206ENST00000487026 PROM1O43490 865 aa22.7■■□□□ 1.22
LIME1-206ENST00000487026 KLK8O60259 260 aa22.7■■□□□ 1.22
LIME1-206ENST00000487026 GLSO94925 669 aaPredicted RBP22.7■■□□□ 1.22
LIME1-206ENST00000487026 IGKV3-11P04433 115 aa22.7■■□□□ 1.22
LIME1-206ENST00000487026 CCL3P10147 92 aa22.7■■□□□ 1.22
LIME1-206ENST00000487026 DNASE1L1P49184 302 aa22.7■■□□□ 1.22
LIME1-206ENST00000487026 TNFRSF17Q02223 184 aa22.7■■□□□ 1.22
LIME1-206ENST00000487026 PCBP2Q15366 365 aaKnown RBP eCLIP22.7■■□□□ 1.222e-8■□□□□ 8.6
LIME1-206ENST00000487026 PIGGQ5H8A4 983 aa22.7■■□□□ 1.22
LIME1-206ENST00000487026 FAM47EQ6ZV65 393 aa22.7■■□□□ 1.22
LIME1-206ENST00000487026 CCDC91Q7Z6B0 441 aa22.7■■□□□ 1.22
LIME1-206ENST00000487026 ZCCHC7Q8N3Z6 543 aaKnown RBP22.7■■□□□ 1.22
LIME1-206ENST00000487026 UCN3Q969E3 161 aa22.7■■□□□ 1.22
LIME1-206ENST00000487026 FAM173AQ9BQD7 235 aa22.7■■□□□ 1.22
LIME1-206ENST00000487026 ZNF717Q9BY31 904 aaPredicted RBP22.7■■□□□ 1.22
LIME1-206ENST00000487026 ZDHHC11Q9H8X9 412 aa22.7■■□□□ 1.22
LIME1-206ENST00000487026 SEMA4BQ9NPR2 832 aaPredicted RBP22.7■■□□□ 1.22
LIME1-206ENST00000487026 SACM1LQ9NTJ5 587 aa22.7■■□□□ 1.22
LIME1-206ENST00000487026 PHF11Q9UIL8 331 aa22.7■■□□□ 1.22
LIME1-206ENST00000487026 TSC22D4Q9Y3Q8 395 aa22.7■■□□□ 1.22
LIME1-206ENST00000487026 LIPGQ9Y5X9 500 aa22.7■■□□□ 1.22
LIME1-206ENST00000487026 ADGRG4Q8IZF6 3080 aa22.69■■□□□ 1.22
LIME1-206ENST00000487026 H0YIV9 168 aa22.69■■□□□ 1.22
LIME1-206ENST00000487026 ALOX15P16050 662 aaPredicted RBP22.69■■□□□ 1.22
LIME1-206ENST00000487026 TLX1P31314 330 aaPredicted RBP22.69■■□□□ 1.22
LIME1-206ENST00000487026 BSGP35613 385 aa22.69■■□□□ 1.22
LIME1-206ENST00000487026 MAGEA5P43359 124 aa22.69■■□□□ 1.22
LIME1-206ENST00000487026 SERPINB8P50452 374 aa22.69■■□□□ 1.22
LIME1-206ENST00000487026 CKAP4Q07065 602 aaKnown RBP22.69■■□□□ 1.22
LIME1-206ENST00000487026 KLC3Q6P597 504 aa22.69■■□□□ 1.22
LIME1-206ENST00000487026 PAOXQ6QHF9 649 aa22.69■■□□□ 1.22
LIME1-206ENST00000487026 SLC22A16Q86VW1 577 aa22.69■■□□□ 1.22
LIME1-206ENST00000487026 TMEM251Q8N6I4 163 aa22.69■■□□□ 1.22
LIME1-206ENST00000487026 OR5M9Q8NGP3 310 aa22.69■■□□□ 1.22
LIME1-206ENST00000487026 SGCZQ96LD1 299 aa22.69■■□□□ 1.22
LIME1-206ENST00000487026 CDK15Q96Q40 435 aa22.69■■□□□ 1.22
LIME1-206ENST00000487026 TP63Q9H3D4 680 aaPredicted RBP22.69■■□□□ 1.22
LIME1-206ENST00000487026 TUBA8Q9NY65 449 aaPredicted RBP22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms