RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 LYARQ9NX58 379 aaKnown RBP13.39□□□□□ -0.27
CLDN11-207ENST00000486975 XPR1Q9UBH6 696 aa13.39□□□□□ -0.27
CLDN11-207ENST00000486975 PCTPQ9UKL6 214 aa13.39□□□□□ -0.27
CLDN11-207ENST00000486975 A0A0A6YYD5 115 aa13.38□□□□□ -0.27
CLDN11-207ENST00000486975 C17orf105B2RV13 164 aa13.38□□□□□ -0.27
CLDN11-207ENST00000486975 TRIM49D1C9J1S8 452 aa13.38□□□□□ -0.27
CLDN11-207ENST00000486975 NPIPA5E9PKD4 350 aa13.38□□□□□ -0.27
CLDN11-207ENST00000486975 CCL21O00585 134 aa13.38□□□□□ -0.27
CLDN11-207ENST00000486975 OR7A17O14581 309 aa13.38□□□□□ -0.27
CLDN11-207ENST00000486975 FGF17O60258 216 aa13.38□□□□□ -0.27
CLDN11-207ENST00000486975 SH3BGRLO75368 114 aa13.38□□□□□ -0.27
CLDN11-207ENST00000486975 OR2J2O76002 312 aa13.38□□□□□ -0.27
CLDN11-207ENST00000486975 SEMA3DO95025 777 aa13.38□□□□□ -0.27
CLDN11-207ENST00000486975 COX7A2P14406 83 aa13.38□□□□□ -0.27
CLDN11-207ENST00000486975 COL8A1P27658 744 aa13.38□□□□□ -0.27
CLDN11-207ENST00000486975 BSGP35613 385 aa13.38□□□□□ -0.27
CLDN11-207ENST00000486975 BUD31P41223 144 aaPredicted RBP13.38□□□□□ -0.27
CLDN11-207ENST00000486975 MEOX1P50221 254 aa13.38□□□□□ -0.27
CLDN11-207ENST00000486975 HK2P52789 917 aa13.38□□□□□ -0.27
CLDN11-207ENST00000486975 RNF4P78317 190 aa13.38□□□□□ -0.27
CLDN11-207ENST00000486975 ART3Q13508 389 aa13.38□□□□□ -0.27
CLDN11-207ENST00000486975 CPSF6Q16630 551 aaKnown RBP eCLIP13.38□□□□□ -0.27
CLDN11-207ENST00000486975 GGTA1PQ4G0N0 100 aa13.38□□□□□ -0.27
CLDN11-207ENST00000486975 RNFT1Q5M7Z0 435 aa13.38□□□□□ -0.27
CLDN11-207ENST00000486975 MDGA2Q7Z553 956 aa13.38□□□□□ -0.27
CLDN11-207ENST00000486975 SULF2Q8IWU5 870 aa13.38□□□□□ -0.27
CLDN11-207ENST00000486975 CHERPQ8IWX8 916 aaKnown RBP13.38□□□□□ -0.27
CLDN11-207ENST00000486975 RNF175Q8N4F7 328 aa13.38□□□□□ -0.27
CLDN11-207ENST00000486975 ZFP62Q8NB50 900 aaPredicted RBP13.38□□□□□ -0.27
CLDN11-207ENST00000486975 OR5L2Q8NGL0 311 aa13.38□□□□□ -0.27
CLDN11-207ENST00000486975 C16orf52Q8NHV5 167 aa13.38□□□□□ -0.27
CLDN11-207ENST00000486975 SLC2A12Q8TD20 617 aa13.38□□□□□ -0.27
CLDN11-207ENST00000486975 ITLN2Q8WWU7 325 aaPredicted RBP13.38□□□□□ -0.27
CLDN11-207ENST00000486975 RASL10BQ96S79 203 aa13.38□□□□□ -0.27
CLDN11-207ENST00000486975 MRPL57Q9BQC6 102 aaKnown RBP13.38□□□□□ -0.27
CLDN11-207ENST00000486975 SORBS1Q9BX66 1292 aaKnown RBP13.38□□□□□ -0.27
CLDN11-207ENST00000486975 C1QTNF3Q9BXJ4 246 aa13.38□□□□□ -0.27
CLDN11-207ENST00000486975 MRPL46Q9H2W6 279 aaKnown RBP13.38□□□□□ -0.27
CLDN11-207ENST00000486975 NOL11Q9H8H0 719 aaKnown RBP13.38□□□□□ -0.27
CLDN11-207ENST00000486975 PRM3Q9NNZ6 103 aa13.38□□□□□ -0.27
CLDN11-207ENST00000486975 NPIPA1Q9UND3 350 aa13.38□□□□□ -0.27
CLDN11-207ENST00000486975 ENTPD4Q9Y227 616 aa13.38□□□□□ -0.27
CLDN11-207ENST00000486975 RNF11Q9Y3C5 154 aa13.38□□□□□ -0.27
CLDN11-207ENST00000486975 ATG4BQ9Y4P1 393 aa13.38□□□□□ -0.27
CLDN11-207ENST00000486975 KLF2Q9Y5W3 355 aaPredicted RBP13.38□□□□□ -0.27
CLDN11-207ENST00000486975 NBPF19A0A087WUL8 3843 aa13.38□□□□□ -0.27
CLDN11-207ENST00000486975 A8MVJ9 347 aa13.37□□□□□ -0.27
CLDN11-207ENST00000486975 POC1B-GALNT4F8VUJ3 575 aa13.37□□□□□ -0.27
CLDN11-207ENST00000486975 PROM1O43490 865 aa13.37□□□□□ -0.27
CLDN11-207ENST00000486975 PEX1O43933 1283 aa13.37□□□□□ -0.27
CLDN11-207ENST00000486975 SMIM24O75264 130 aa13.37□□□□□ -0.27
CLDN11-207ENST00000486975 ETHE1O95571 254 aa13.37□□□□□ -0.27
CLDN11-207ENST00000486975 IGKV3-11P04433 115 aa13.37□□□□□ -0.27
CLDN11-207ENST00000486975 RPS17P08708 135 aaKnown RBP13.37□□□□□ -0.27
CLDN11-207ENST00000486975 SNRPAP09012 282 aaKnown RBP13.37□□□□□ -0.27
CLDN11-207ENST00000486975 TNNI3P19429 210 aa13.37□□□□□ -0.27
CLDN11-207ENST00000486975 AGAP20933 346 aa13.37□□□□□ -0.27
CLDN11-207ENST00000486975 TLX1P31314 330 aaPredicted RBP13.37□□□□□ -0.27
CLDN11-207ENST00000486975 CCNG1P51959 295 aa13.37□□□□□ -0.27
CLDN11-207ENST00000486975 HNRNPH2P55795 449 aaKnown RBP13.37□□□□□ -0.27
CLDN11-207ENST00000486975 PLIN5Q00G26 463 aa13.37□□□□□ -0.27
CLDN11-207ENST00000486975 TRAF3Q13114 568 aa13.37□□□□□ -0.27
CLDN11-207ENST00000486975 C3AR1Q16581 482 aa13.37□□□□□ -0.27
CLDN11-207ENST00000486975 LGSNQ5TDP6 509 aa13.37□□□□□ -0.27
CLDN11-207ENST00000486975 FRG2Q64ET8 278 aa13.37□□□□□ -0.27
CLDN11-207ENST00000486975 TRMT10CQ7L0Y3 403 aaKnown RBP13.37□□□□□ -0.27
CLDN11-207ENST00000486975 LCA5Q86VQ0 697 aa13.37□□□□□ -0.27
CLDN11-207ENST00000486975 NUDT13Q86X67 352 aa13.37□□□□□ -0.27
CLDN11-207ENST00000486975 ZNF808Q8N4W9 903 aaPredicted RBP13.37□□□□□ -0.27
CLDN11-207ENST00000486975 PSD4Q8NDX1 1056 aa13.37□□□□□ -0.27
CLDN11-207ENST00000486975 OR52B6Q8NGF0 335 aa13.37□□□□□ -0.27
CLDN11-207ENST00000486975 NUBPLQ8TB37 319 aa13.37□□□□□ -0.27
CLDN11-207ENST00000486975 ZNF721Q8TF20 911 aa13.37□□□□□ -0.27
CLDN11-207ENST00000486975 ASB15Q8WXK1 588 aa13.37□□□□□ -0.27
CLDN11-207ENST00000486975 FBXL20Q96IG2 436 aa13.37□□□□□ -0.27
CLDN11-207ENST00000486975 ART5Q96L15 291 aa13.37□□□□□ -0.27
CLDN11-207ENST00000486975 DGAT2Q96PD7 388 aa13.37□□□□□ -0.27
CLDN11-207ENST00000486975 FRG2BQ96QU4 278 aa13.37□□□□□ -0.27
CLDN11-207ENST00000486975 SERPINI1Q99574 410 aa13.37□□□□□ -0.27
CLDN11-207ENST00000486975 PELOQ9BRX2 385 aaKnown RBP13.37□□□□□ -0.27
CLDN11-207ENST00000486975 OR8D2Q9GZM6 311 aa13.37□□□□□ -0.27
CLDN11-207ENST00000486975 TSPAN10Q9H1Z9 355 aaPredicted RBP13.37□□□□□ -0.27
CLDN11-207ENST00000486975 ZBTB26Q9HCK0 441 aa13.37□□□□□ -0.27
CLDN11-207ENST00000486975 HPF1Q9NWY4 346 aa13.37□□□□□ -0.27
CLDN11-207ENST00000486975 COPS7AQ9UBW8 275 aa13.37□□□□□ -0.27
CLDN11-207ENST00000486975 ASB4Q9Y574 426 aa13.37□□□□□ -0.27
CLDN11-207ENST00000486975 EXOC1LA0A1B0GW35 172 aa13.36□□□□□ -0.27
CLDN11-207ENST00000486975 DYRK3O43781 588 aa13.36□□□□□ -0.27
CLDN11-207ENST00000486975 TMPRSS11DO60235 418 aa13.36□□□□□ -0.27
CLDN11-207ENST00000486975 OR6B1O95007 311 aa13.36□□□□□ -0.27
CLDN11-207ENST00000486975 FAM58BPP0C7Q3 252 aa13.36□□□□□ -0.27
CLDN11-207ENST00000486975 GALNSP34059 522 aa13.36□□□□□ -0.27
CLDN11-207ENST00000486975 ID2Q02363 134 aa13.36□□□□□ -0.27
CLDN11-207ENST00000486975 FOLH1Q04609 750 aa13.36□□□□□ -0.27
CLDN11-207ENST00000486975 MPEG1Q2M385 716 aa13.36□□□□□ -0.27
CLDN11-207ENST00000486975 SPRED3Q2MJR0 410 aa13.36□□□□□ -0.27
CLDN11-207ENST00000486975 TIFABQ6ZNK6 161 aa13.36□□□□□ -0.27
CLDN11-207ENST00000486975 C16orf47Q6ZP98 133 aaPredicted RBP13.36□□□□□ -0.27
CLDN11-207ENST00000486975 IFT20Q8IY31 132 aa13.36□□□□□ -0.27
CLDN11-207ENST00000486975 ST13P4Q8IZP2 240 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms