RNA–Protein interactions for RNA: ENST00000486793.5

GMDS-205, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 3

Gene GMDS, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-205ENST00000486793 CXorf49A8MYA2 514 aaPredicted RBP17.3■□□□□ 0.36
GMDS-205ENST00000486793 HRKO00198 91 aa17.3■□□□□ 0.36
GMDS-205ENST00000486793 SAP18O00422 153 aaKnown RBP17.3■□□□□ 0.36
GMDS-205ENST00000486793 ZSCAN12O43309 604 aa17.3■□□□□ 0.36
GMDS-205ENST00000486793 FGF17O60258 216 aa17.3■□□□□ 0.36
GMDS-205ENST00000486793 HCN1O60741 890 aa17.3■□□□□ 0.36
GMDS-205ENST00000486793 CTAG2O75638 210 aa17.3■□□□□ 0.36
GMDS-205ENST00000486793 IGKV3-11P04433 115 aa17.3■□□□□ 0.36
GMDS-205ENST00000486793 RFPL3SP0C7P2 107 aa17.3■□□□□ 0.36
GMDS-205ENST00000486793 CD99P14209 185 aa17.3■□□□□ 0.36
GMDS-205ENST00000486793 CPN2P22792 545 aa17.3■□□□□ 0.36
GMDS-205ENST00000486793 CASP2P42575 452 aa17.3■□□□□ 0.36
GMDS-205ENST00000486793 STT3AP46977 705 aa17.3■□□□□ 0.36
GMDS-205ENST00000486793 KRTAP21-3Q3LHN1 58 aa17.3■□□□□ 0.36
GMDS-205ENST00000486793 TMEM35AQ53FP2 167 aa17.3■□□□□ 0.36
GMDS-205ENST00000486793 ADGRD1Q6QNK2 874 aa17.3■□□□□ 0.36
GMDS-205ENST00000486793 DGAT2L6Q6ZPD8 337 aa17.3■□□□□ 0.36
GMDS-205ENST00000486793 CHSY3Q70JA7 882 aa17.3■□□□□ 0.36
GMDS-205ENST00000486793 CREG2Q8IUH2 290 aa17.3■□□□□ 0.36
GMDS-205ENST00000486793 C9orf40Q8IXQ3 194 aa17.3■□□□□ 0.36
GMDS-205ENST00000486793 PDPRQ8NCN5 879 aa17.3■□□□□ 0.36
GMDS-205ENST00000486793 NUBPLQ8TB37 319 aa17.3■□□□□ 0.36
GMDS-205ENST00000486793 TMUB1Q9BVT8 246 aa17.3■□□□□ 0.36
GMDS-205ENST00000486793 SORBS1Q9BX66 1292 aaKnown RBP17.3■□□□□ 0.36
GMDS-205ENST00000486793 CD244Q9BZW8 370 aa17.3■□□□□ 0.36
GMDS-205ENST00000486793 SPRR3Q9UBC9 169 aa17.3■□□□□ 0.36
GMDS-205ENST00000486793 SNX24Q9Y343 169 aa17.3■□□□□ 0.36
GMDS-205ENST00000486793 ZNF407Q9C0G0 2248 aa17.3■□□□□ 0.36
GMDS-205ENST00000486793 INTS1Q8N201 2190 aaKnown RBP17.3■□□□□ 0.36
GMDS-205ENST00000486793 EFCAB8A8MWE9 144 aa17.29■□□□□ 0.36
GMDS-205ENST00000486793 SCELO95171 688 aa17.29■□□□□ 0.36
GMDS-205ENST00000486793 PCNAP12004 261 aa17.29■□□□□ 0.36
GMDS-205ENST00000486793 COX7A2P14406 83 aa17.29■□□□□ 0.36
GMDS-205ENST00000486793 ENDOUP21128 410 aaKnown RBP17.29■□□□□ 0.36
GMDS-205ENST00000486793 IGLV3-21P80748 117 aaPredicted RBP17.29■□□□□ 0.36
GMDS-205ENST00000486793 ILF2Q12905 390 aaKnown RBP17.29■□□□□ 0.36
GMDS-205ENST00000486793 CBLBQ13191 982 aa17.29■□□□□ 0.36
GMDS-205ENST00000486793 SLAMF1Q13291 335 aa17.29■□□□□ 0.36
GMDS-205ENST00000486793 SLC25A35Q3KQZ1 300 aa17.29■□□□□ 0.36
GMDS-205ENST00000486793 LYPD8Q6UX82 237 aa17.29■□□□□ 0.36
GMDS-205ENST00000486793 WDR53Q7Z5U6 358 aaPredicted RBP17.29■□□□□ 0.36
GMDS-205ENST00000486793 ZZZ3Q8IYH5 903 aa17.29■□□□□ 0.36
GMDS-205ENST00000486793 C7orf57Q8NEG2 295 aa17.29■□□□□ 0.36
GMDS-205ENST00000486793 DOK4Q8TEW6 326 aa17.29■□□□□ 0.36
GMDS-205ENST00000486793 PAQR8Q8TEZ7 354 aa17.29■□□□□ 0.36
GMDS-205ENST00000486793 RBM18Q96H35 190 aaKnown RBP17.29■□□□□ 0.36
GMDS-205ENST00000486793 UBXN10Q96LJ8 280 aa17.29■□□□□ 0.36
GMDS-205ENST00000486793 DGAT2Q96PD7 388 aa17.29■□□□□ 0.36
GMDS-205ENST00000486793 KRT12Q99456 494 aa17.29■□□□□ 0.36
GMDS-205ENST00000486793 PHACTR1Q9C0D0 580 aa17.29■□□□□ 0.36
GMDS-205ENST00000486793 OR51B5Q9H339 312 aa17.29■□□□□ 0.36
GMDS-205ENST00000486793 LIME1Q9H400 295 aa17.29■□□□□ 0.36
GMDS-205ENST00000486793 ZFP64Q9NPA5 681 aa17.29■□□□□ 0.36
GMDS-205ENST00000486793 IGSF5Q9NSI5 407 aa17.29■□□□□ 0.36
GMDS-205ENST00000486793 CCM2LQ9NUG4 571 aaPredicted RBP17.29■□□□□ 0.36
GMDS-205ENST00000486793 RNF112Q9ULX5 631 aa17.29■□□□□ 0.36
GMDS-205ENST00000486793 FAM47E-STBD1D6RA91 191 aa17.28■□□□□ 0.36
GMDS-205ENST00000486793 GABRA1P14867 456 aa17.28■□□□□ 0.36
GMDS-205ENST00000486793 STMN1P16949 149 aa17.28■□□□□ 0.36
GMDS-205ENST00000486793 SSTR1P30872 391 aa17.28■□□□□ 0.36
GMDS-205ENST00000486793 GMPRP36959 345 aa17.28■□□□□ 0.36
GMDS-205ENST00000486793 SSR2P43308 183 aa17.28■□□□□ 0.36
GMDS-205ENST00000486793 RPL21P46778 160 aaKnown RBP17.28■□□□□ 0.36
GMDS-205ENST00000486793 KCNJ2P63252 427 aa17.28■□□□□ 0.36
GMDS-205ENST00000486793 E2F2Q14209 437 aa17.28■□□□□ 0.36
GMDS-205ENST00000486793 RIPPLY2Q5TAB7 128 aa17.28■□□□□ 0.36
GMDS-205ENST00000486793 DEPDC1Q5TB30 811 aa17.28■□□□□ 0.36
GMDS-205ENST00000486793 PRAMEF20Q5VT98 475 aa17.28■□□□□ 0.36
GMDS-205ENST00000486793 KHDRBS2Q5VWX1 349 aaKnown RBP17.28■□□□□ 0.36
GMDS-205ENST00000486793 OR4C11Q6IEV9 310 aa17.28■□□□□ 0.36
GMDS-205ENST00000486793 MED27Q6P2C8 311 aa17.28■□□□□ 0.36
GMDS-205ENST00000486793 LAS2Q8IYD9 372 aa17.28■□□□□ 0.36
GMDS-205ENST00000486793 BBOF1Q8ND07 529 aa17.28■□□□□ 0.36
GMDS-205ENST00000486793 OR7G3Q8NG95 312 aa17.28■□□□□ 0.36
GMDS-205ENST00000486793 SLC22A8Q8TCC7 542 aa17.28■□□□□ 0.36
GMDS-205ENST00000486793 PYROXD1Q8WU10 500 aa17.28■□□□□ 0.36
GMDS-205ENST00000486793 EXT2Q93063 718 aa17.28■□□□□ 0.36
GMDS-205ENST00000486793 UBE2E3Q969T4 207 aa17.28■□□□□ 0.36
GMDS-205ENST00000486793 POM121Q96HA1 1249 aa17.28■□□□□ 0.36
GMDS-205ENST00000486793 FOXC2Q99958 501 aa17.28■□□□□ 0.36
GMDS-205ENST00000486793 POLDIP3Q9BY77 421 aaKnown RBP17.28■□□□□ 0.36
GMDS-205ENST00000486793 CXXC4Q9H2H0 198 aa17.28■□□□□ 0.36
GMDS-205ENST00000486793 RPF2Q9H7B2 306 aaKnown RBP17.28■□□□□ 0.36
GMDS-205ENST00000486793 PROK2Q9HC23 129 aa17.28■□□□□ 0.36
GMDS-205ENST00000486793 WASHC1A8K0Z3 465 aa17.27■□□□□ 0.36
GMDS-205ENST00000486793 DYRK3O43781 588 aa17.27■□□□□ 0.36
GMDS-205ENST00000486793 S100BP04271 92 aaPredicted RBP17.27■□□□□ 0.36
GMDS-205ENST00000486793 KIR2DL3P43628 341 aa17.27■□□□□ 0.36
GMDS-205ENST00000486793 FOLH1Q04609 750 aa17.27■□□□□ 0.36
GMDS-205ENST00000486793 BIKQ13323 160 aa17.27■□□□□ 0.36
GMDS-205ENST00000486793 SEM1Q6ZVN7 128 aa17.27■□□□□ 0.36
GMDS-205ENST00000486793 LRRC70Q7Z2Q7 622 aa17.27■□□□□ 0.36
GMDS-205ENST00000486793 LRRC25Q8N386 305 aaPredicted RBP17.27■□□□□ 0.36
GMDS-205ENST00000486793 RNF175Q8N4F7 328 aa17.27■□□□□ 0.36
GMDS-205ENST00000486793 SLC15A4Q8N697 577 aa17.27■□□□□ 0.36
GMDS-205ENST00000486793 CDKL2Q92772 493 aa17.27■□□□□ 0.36
GMDS-205ENST00000486793 TANKQ92844 425 aa17.27■□□□□ 0.36
GMDS-205ENST00000486793 SPACA9Q96E40 222 aaPredicted RBP17.27■□□□□ 0.36
GMDS-205ENST00000486793 CMTM7Q96FZ5 175 aa17.27■□□□□ 0.36
GMDS-205ENST00000486793 FBXL20Q96IG2 436 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms