RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 PHF11Q9UIL8 331 aa10.15□□□□□ -0.78
CCDC171-208ENST00000486641 HCN2Q9UL51 889 aa10.15□□□□□ -0.78
CCDC171-208ENST00000486641 EXO1Q9UQ84 846 aaKnown RBP10.15□□□□□ -0.78
CCDC171-208ENST00000486641 GREB1Q4ZG55 1949 aa10.15□□□□□ -0.78
CCDC171-208ENST00000486641 TRIP12Q14669 1992 aaPredicted RBP10.15□□□□□ -0.79
CCDC171-208ENST00000486641 TRBV4-1A0A0J9YWV2 114 aa10.15□□□□□ -0.79
CCDC171-208ENST00000486641 A0A1W2PRG6 482 aa10.15□□□□□ -0.79
CCDC171-208ENST00000486641 MBLAC1A4D2B0 266 aaPredicted RBP10.15□□□□□ -0.79
CCDC171-208ENST00000486641 ARL5CA6NH57 179 aa10.15□□□□□ -0.79
CCDC171-208ENST00000486641 STK25O00506 426 aa10.15□□□□□ -0.79
CCDC171-208ENST00000486641 SLC30A4O14863 429 aa10.15□□□□□ -0.79
CCDC171-208ENST00000486641 PRMT3O60678 531 aa10.15□□□□□ -0.79
CCDC171-208ENST00000486641 TRBC1P01850 177 aa10.15□□□□□ -0.79
CCDC171-208ENST00000486641 ANXA3P12429 323 aa10.15□□□□□ -0.79
CCDC171-208ENST00000486641 OSMP13725 252 aa10.15□□□□□ -0.79
CCDC171-208ENST00000486641 ATF6P18850 670 aa10.15□□□□□ -0.79
CCDC171-208ENST00000486641 PTBP1P26599 531 aaKnown RBP eCLIP10.15□□□□□ -0.79
CCDC171-208ENST00000486641 MAPKAPK2P49137 400 aa10.15□□□□□ -0.79
CCDC171-208ENST00000486641 RPIAP49247 311 aa10.15□□□□□ -0.79
CCDC171-208ENST00000486641 MVDP53602 400 aa10.15□□□□□ -0.79
CCDC171-208ENST00000486641 PURAQ00577 322 aaKnown RBP10.15□□□□□ -0.79
CCDC171-208ENST00000486641 PUDPQ08623 228 aa10.15□□□□□ -0.79
CCDC171-208ENST00000486641 EIF2B5Q13144 721 aaKnown RBP10.15□□□□□ -0.79
CCDC171-208ENST00000486641 SCARB2Q14108 478 aa10.15□□□□□ -0.79
CCDC171-208ENST00000486641 TUSC1Q2TAM9 212 aa10.15□□□□□ -0.79
CCDC171-208ENST00000486641 ATXN7L2Q5T6C5 722 aaPredicted RBP10.15□□□□□ -0.79
CCDC171-208ENST00000486641 FAM151BQ6UXP7 276 aa10.15□□□□□ -0.79
CCDC171-208ENST00000486641 CASP12Q6UXS9 341 aa10.15□□□□□ -0.79
CCDC171-208ENST00000486641 OTOP2Q7RTS6 562 aa10.15□□□□□ -0.79
CCDC171-208ENST00000486641 APOBEC3FQ8IUX4 373 aaKnown RBP10.15□□□□□ -0.79
CCDC171-208ENST00000486641 ADGRF3Q8IZF5 1079 aa10.15□□□□□ -0.79
CCDC171-208ENST00000486641 LINC00518Q8N0U6 118 aa10.15□□□□□ -0.79
CCDC171-208ENST00000486641 MS4A15Q8N5U1 240 aa10.15□□□□□ -0.79
CCDC171-208ENST00000486641 CELF5Q8N6W0 485 aaKnown RBP10.15□□□□□ -0.79
CCDC171-208ENST00000486641 OR6J1Q8NGC5 347 aa10.15□□□□□ -0.79
CCDC171-208ENST00000486641 LILRB1Q8NHL6 650 aaPredicted RBP10.15□□□□□ -0.79
CCDC171-208ENST00000486641 HUS1BQ8NHY5 278 aa10.15□□□□□ -0.79
CCDC171-208ENST00000486641 WBP1Q96G27 269 aa10.15□□□□□ -0.79
CCDC171-208ENST00000486641 KATNBL1Q9H079 304 aa10.15□□□□□ -0.79
CCDC171-208ENST00000486641 MCCC2Q9HCC0 563 aa10.15□□□□□ -0.79
CCDC171-208ENST00000486641 ARL15Q9NXU5 204 aa10.15□□□□□ -0.79
CCDC171-208ENST00000486641 IL17CQ9P0M4 197 aa10.15□□□□□ -0.79
CCDC171-208ENST00000486641 NDOR1Q9UHB4 597 aa10.15□□□□□ -0.79
CCDC171-208ENST00000486641 AFF4Q9UHB7 1163 aaKnown RBP10.15□□□□□ -0.79
CCDC171-208ENST00000486641 CORO2BQ9UQ03 480 aa10.15□□□□□ -0.79
CCDC171-208ENST00000486641 GSTK1Q9Y2Q3 226 aa10.15□□□□□ -0.79
CCDC171-208ENST00000486641 A0A1B0GVM2 712 aa10.14□□□□□ -0.79
CCDC171-208ENST00000486641 NPIPB8E9PQR5 432 aa10.14□□□□□ -0.79
CCDC171-208ENST00000486641 H3BN98 237 aa10.14□□□□□ -0.79
CCDC171-208ENST00000486641 CBX4O00257 560 aa10.14□□□□□ -0.79
CCDC171-208ENST00000486641 CELF2O95319 508 aaKnown RBP10.14□□□□□ -0.79
CCDC171-208ENST00000486641 APBA3O96018 575 aa10.14□□□□□ -0.79
CCDC171-208ENST00000486641 DHFRP00374 187 aa10.14□□□□□ -0.79
CCDC171-208ENST00000486641 F11P03951 625 aa10.14□□□□□ -0.79
CCDC171-208ENST00000486641 KELP23276 732 aa10.14□□□□□ -0.79
CCDC171-208ENST00000486641 PPIBP23284 216 aaKnown RBP10.14□□□□□ -0.79
CCDC171-208ENST00000486641 ATP12AP54707 1039 aa10.14□□□□□ -0.79
CCDC171-208ENST00000486641 ILKQ13418 452 aa10.14□□□□□ -0.79
CCDC171-208ENST00000486641 CAMK2DQ13557 499 aa10.14□□□□□ -0.79
CCDC171-208ENST00000486641 HEPACAMQ14CZ8 416 aa10.14□□□□□ -0.79
CCDC171-208ENST00000486641 GGTA1PQ4G0N0 100 aa10.14□□□□□ -0.79
CCDC171-208ENST00000486641 CPTPQ5TA50 214 aa10.14□□□□□ -0.79
CCDC171-208ENST00000486641 FRG2Q64ET8 278 aa10.14□□□□□ -0.79
CCDC171-208ENST00000486641 C12orf73Q69YU5 71 aa10.14□□□□□ -0.79
CCDC171-208ENST00000486641 UNC5DQ6UXZ4 953 aa10.14□□□□□ -0.79
CCDC171-208ENST00000486641 CHMP1BQ7LBR1 199 aa10.14□□□□□ -0.79
CCDC171-208ENST00000486641 TAGAPQ8N103 731 aa10.14□□□□□ -0.79
CCDC171-208ENST00000486641 GEMIN6Q8WXD5 167 aaKnown RBP10.14□□□□□ -0.79
CCDC171-208ENST00000486641 SCMH1Q96GD3 660 aa10.14□□□□□ -0.79
CCDC171-208ENST00000486641 FRG2BQ96QU4 278 aa10.14□□□□□ -0.79
CCDC171-208ENST00000486641 ADGRE3Q9BY15 652 aa10.14□□□□□ -0.79
CCDC171-208ENST00000486641 GSX2Q9BZM3 304 aa10.14□□□□□ -0.79
CCDC171-208ENST00000486641 BTNL2Q9UIR0 455 aa10.14□□□□□ -0.79
CCDC171-208ENST00000486641 KCNMB2Q9Y691 235 aa10.14□□□□□ -0.79
CCDC171-208ENST00000486641 ENPP4Q9Y6X5 453 aa10.14□□□□□ -0.79
CCDC171-208ENST00000486641 A0A1W2PPL8 197 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 SHISA3A0PJX4 238 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 C7orf66A4D0T2 115 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 FFAR1O14842 300 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 SCAMP2O15127 329 aaKnown RBP10.13□□□□□ -0.79
CCDC171-208ENST00000486641 PI15O43692 258 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 TLX2O43763 284 aaPredicted RBP10.13□□□□□ -0.79
CCDC171-208ENST00000486641 APOL3O95236 402 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 RAB36O95755 333 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 SNAI1O95863 264 aaPredicted RBP10.13□□□□□ -0.79
CCDC171-208ENST00000486641 RECKO95980 971 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 ACSM4P0C7M7 580 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 TFPIP10646 304 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 RHCEP18577 417 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 CRYBB1P53674 252 aaPredicted RBP10.13□□□□□ -0.79
CCDC171-208ENST00000486641 PTPN5P54829 565 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 WNT4P56705 351 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 HSF2Q03933 536 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 CSTF1Q05048 431 aaKnown RBP10.13□□□□□ -0.79
CCDC171-208ENST00000486641 C2orf80Q0P641 193 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 ADAM15Q13444 863 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 ZNF273Q14593 569 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 OCLNQ16625 522 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 C3orf38Q5JPI3 329 aa10.13□□□□□ -0.79
CCDC171-208ENST00000486641 CD300LGQ6UXG3 332 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms