RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 CTSFQ9UBX1 484 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 ZNF282Q9UDV7 671 aaPredicted RBP5.31□□□□□ -1.56
COPS3-208ENST00000486032 VTI1BQ9UEU0 232 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 BAIAP2L1Q9UHR4 511 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 HAO1Q9UJM8 370 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 ZNF232Q9UNY5 417 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 FARSAQ9Y285 508 aaKnown RBP5.31□□□□□ -1.56
COPS3-208ENST00000486032 PTRH2Q9Y3E5 179 aaKnown RBP5.31□□□□□ -1.56
COPS3-208ENST00000486032 TSC22D4Q9Y3Q8 395 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 PCDHGA7Q9Y5G6 932 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 PCDHGA3Q9Y5H0 932 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 MRPS18BQ9Y676 258 aaKnown RBP5.31□□□□□ -1.56
COPS3-208ENST00000486032 SLC22A7Q9Y694 548 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 SPACA6W5XKT8 324 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 SDK2Q58EX2 2172 aa5.31□□□□□ -1.56
COPS3-208ENST00000486032 A0A0A6YYD5 115 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 SERTM1A2A2V5 107 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 GMNCA6NCL1 334 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 WASHC1A8K0Z3 465 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 A8MUA0 341 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 C9JVG2 144 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 H0YIG0 161 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 ERAL1O75616 437 aaKnown RBP5.3□□□□□ -1.56
COPS3-208ENST00000486032 SEMA3DO95025 777 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 HEXBP07686 556 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 IL3P08700 152 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 ZGLP1P0C6A0 271 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 C8orf89P0DMQ9 161 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 RNH1P13489 461 aaKnown RBP5.3□□□□□ -1.56
COPS3-208ENST00000486032 LBPP18428 481 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 NCF2P19878 526 aaPredicted RBP5.3□□□□□ -1.56
COPS3-208ENST00000486032 ITGAXP20702 1163 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 CD82P27701 267 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 MAPK1P28482 360 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 TPP2P29144 1249 aaPredicted RBP5.3□□□□□ -1.56
COPS3-208ENST00000486032 OTX2P32243 289 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 LSP1P33241 339 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 FOLR3P41439 243 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 IDH3AP50213 366 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 HNRNPFP52597 415 aaKnown RBP5.3□□□□□ -1.56
COPS3-208ENST00000486032 ARFIP2P53365 341 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 EMP2P54851 167 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 LIM2P55344 173 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 TAS2R50P59544 299 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 RAE1P78406 368 aaKnown RBP5.3□□□□□ -1.56
COPS3-208ENST00000486032 BTG2P78543 158 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 MC1RQ01726 317 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 ZNF33BQ06732 778 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 ZNF763Q0D2J5 394 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 C2orf80Q0P641 193 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 SLC13A2Q13183 592 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 RPS6KA2Q15349 733 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 NKG7Q16617 165 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 XKR7Q5GH72 579 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 C6orf136Q5SQH8 315 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 C10orf62Q5T681 223 aaPredicted RBP5.3□□□□□ -1.56
COPS3-208ENST00000486032 IL23RQ5VWK5 629 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 TMEM198Q66K66 360 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 ANKRD26P1Q6NSI1 321 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 CGB2Q6NT52 195 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 NIPAL1Q6NVV3 410 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 NOXRED1Q6NXP6 359 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 FAM180BQ6P0A1 224 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 FAM198BQ6UWH4 519 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 RGS9BPQ6ZS82 235 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 COX15Q7KZN9 410 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 OVCH1Q7RTY7 1134 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.3□□□□□ -1.56
COPS3-208ENST00000486032 GPR180Q86V85 440 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 OR4N5Q8IXE1 308 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 MMP21Q8N119 569 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 TMEM132CQ8N3T6 1108 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 TMEM52Q8NDY8 209 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 STT3BQ8TCJ2 826 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 DOK4Q8TEW6 326 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 C16orf78Q8WTQ4 265 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 KCNE4Q8WWG9 221 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 ZCCHC14Q8WYQ9 949 aaKnown RBP5.3□□□□□ -1.56
COPS3-208ENST00000486032 FGF11Q92914 225 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 KIAA1143Q96AT1 154 aaPredicted RBP5.3□□□□□ -1.56
COPS3-208ENST00000486032 MVB12AQ96EY5 273 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 HSH2DQ96JZ2 352 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 EGLN2Q96KS0 407 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 LRFN5Q96NI6 719 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 PTCHD1Q96NR3 888 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 CATSPER2Q96P56 530 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 OR52B2Q96RD2 323 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 CRB3Q9BUF7 120 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 TMEM120AQ9BXJ8 343 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 ZNF717Q9BY31 904 aaPredicted RBP5.3□□□□□ -1.56
COPS3-208ENST00000486032 CCDC134Q9H6E4 229 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 DDX31Q9H8H2 851 aaKnown RBP5.3□□□□□ -1.56
COPS3-208ENST00000486032 GPN2Q9H9Y4 310 aaPredicted RBP5.3□□□□□ -1.56
COPS3-208ENST00000486032 WDR41Q9HAD4 459 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 MEAF6Q9HAF1 191 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 SLC24A3Q9HC58 644 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 SRA1Q9HD15 236 aaKnown RBP5.3□□□□□ -1.56
COPS3-208ENST00000486032 PRTFDC1Q9NRG1 225 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 LYARQ9NX58 379 aaKnown RBP5.3□□□□□ -1.56
COPS3-208ENST00000486032 TEX10Q9NXF1 929 aaPredicted RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms