RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 FAM117AQ9C073 453 aa16.52■□□□□ 0.24
CHMP3-207ENST00000485465 VN1R1Q9GZP7 353 aa16.52■□□□□ 0.24
CHMP3-207ENST00000485465 CCDC167Q9P0B6 97 aa16.52■□□□□ 0.24
CHMP3-207ENST00000485465 SH3BP4Q9P0V3 963 aa16.52■□□□□ 0.24
CHMP3-207ENST00000485465 ARMCX1Q9P291 453 aa16.52■□□□□ 0.24
CHMP3-207ENST00000485465 MKL2Q9ULH7 1088 aa16.52■□□□□ 0.24
CHMP3-207ENST00000485465 FARSAQ9Y285 508 aaKnown RBP16.52■□□□□ 0.24
CHMP3-207ENST00000485465 LOC101059948A0A1B0GTJ6 334 aa16.51■□□□□ 0.23
CHMP3-207ENST00000485465 C21orf140B9A014 251 aa16.51■□□□□ 0.23
CHMP3-207ENST00000485465 TERTO14746 1132 aaKnown RBP16.51■□□□□ 0.23
CHMP3-207ENST00000485465 SLC22A2O15244 555 aa16.51■□□□□ 0.23
CHMP3-207ENST00000485465 LDB3O75112 727 aa16.51■□□□□ 0.23
CHMP3-207ENST00000485465 ERAL1O75616 437 aaKnown RBP16.51■□□□□ 0.23
CHMP3-207ENST00000485465 KLF7O75840 302 aaPredicted RBP16.51■□□□□ 0.23
CHMP3-207ENST00000485465 GPR75O95800 540 aa16.51■□□□□ 0.23
CHMP3-207ENST00000485465 RECKO95980 971 aa16.51■□□□□ 0.23
CHMP3-207ENST00000485465 HEXBP07686 556 aa16.51■□□□□ 0.23
CHMP3-207ENST00000485465 LAMP1P11279 417 aa16.51■□□□□ 0.23
CHMP3-207ENST00000485465 PIK3R1P27986 724 aa16.51■□□□□ 0.23
CHMP3-207ENST00000485465 DLSTP36957 453 aa16.51■□□□□ 0.23
CHMP3-207ENST00000485465 POLR2JP52435 117 aaKnown RBP16.51■□□□□ 0.23
CHMP3-207ENST00000485465 EFNA3P52797 238 aa16.51■□□□□ 0.23
CHMP3-207ENST00000485465 RPS15P62841 145 aaKnown RBP16.51■□□□□ 0.23
CHMP3-207ENST00000485465 FOLH1Q04609 750 aa16.51■□□□□ 0.23
CHMP3-207ENST00000485465 SRSF11Q05519 484 aaKnown RBP16.51■□□□□ 0.23
CHMP3-207ENST00000485465 DNASE1L3Q13609 305 aa16.51■□□□□ 0.23
CHMP3-207ENST00000485465 ZNF385BQ569K4 471 aa16.51■□□□□ 0.23
CHMP3-207ENST00000485465 TMEM151BQ8IW70 566 aa16.51■□□□□ 0.23
CHMP3-207ENST00000485465 OR4N5Q8IXE1 308 aa16.51■□□□□ 0.23
CHMP3-207ENST00000485465 IL22RA1Q8N6P7 574 aa16.51■□□□□ 0.23
CHMP3-207ENST00000485465 PLPP5Q8NEB5 264 aa16.51■□□□□ 0.23
CHMP3-207ENST00000485465 KLHL29Q96CT2 875 aa16.51■□□□□ 0.23
CHMP3-207ENST00000485465 PTCHD1Q96NR3 888 aa16.51■□□□□ 0.23
CHMP3-207ENST00000485465 LRRC37BQ96QE4 947 aa16.51■□□□□ 0.23
CHMP3-207ENST00000485465 CCDC106Q9BWC9 280 aa16.51■□□□□ 0.23
CHMP3-207ENST00000485465 GPR87Q9BY21 358 aa16.51■□□□□ 0.23
CHMP3-207ENST00000485465 SLC35C2Q9NQQ7 365 aa16.51■□□□□ 0.23
CHMP3-207ENST00000485465 NECTIN3Q9NQS3 549 aa16.51■□□□□ 0.23
CHMP3-207ENST00000485465 ATAD3AQ9NVI7 634 aa16.51■□□□□ 0.23
CHMP3-207ENST00000485465 PTRH2Q9Y3E5 179 aaKnown RBP16.51■□□□□ 0.23
CHMP3-207ENST00000485465 CAPN7Q9Y6W3 813 aa16.51■□□□□ 0.23
CHMP3-207ENST00000485465 WDFY3Q8IZQ1 3526 aa16.5■□□□□ 0.23
CHMP3-207ENST00000485465 IDSB3KWA1 339 aa16.5■□□□□ 0.23
CHMP3-207ENST00000485465 TGFBR3LH3BV60 316 aa16.5■□□□□ 0.23
CHMP3-207ENST00000485465 CD1EP15812 388 aa16.5■□□□□ 0.23
CHMP3-207ENST00000485465 MAOAP21397 527 aa16.5■□□□□ 0.23
CHMP3-207ENST00000485465 S100A3P33764 101 aa16.5■□□□□ 0.23
CHMP3-207ENST00000485465 XKP51811 444 aa16.5■□□□□ 0.23
CHMP3-207ENST00000485465 EMP2P54851 167 aa16.5■□□□□ 0.23
CHMP3-207ENST00000485465 IGLV3-21P80748 117 aaPredicted RBP16.5■□□□□ 0.23
CHMP3-207ENST00000485465 ID2Q02363 134 aa16.5■□□□□ 0.23
CHMP3-207ENST00000485465 STX4Q12846 297 aa16.5■□□□□ 0.23
CHMP3-207ENST00000485465 TGIF1Q15583 401 aa16.5■□□□□ 0.23
CHMP3-207ENST00000485465 MPEG1Q2M385 716 aa16.5■□□□□ 0.23
CHMP3-207ENST00000485465 DPY19L1Q2PZI1 675 aa16.5■□□□□ 0.23
CHMP3-207ENST00000485465 FAM174BQ3ZCQ3 159 aa16.5■□□□□ 0.23
CHMP3-207ENST00000485465 SPANXN4Q5MJ08 99 aa16.5■□□□□ 0.23
CHMP3-207ENST00000485465 BLOC1S3Q6QNY0 202 aa16.5■□□□□ 0.23
CHMP3-207ENST00000485465 OR8J2Q8NGG1 315 aa16.5■□□□□ 0.23
CHMP3-207ENST00000485465 OR2Y1Q8NGV0 311 aa16.5■□□□□ 0.23
CHMP3-207ENST00000485465 ZNF681Q96N22 645 aa16.5■□□□□ 0.23
CHMP3-207ENST00000485465 CRB3Q9BUF7 120 aa16.5■□□□□ 0.23
CHMP3-207ENST00000485465 DUSP26Q9BV47 211 aa16.5■□□□□ 0.23
CHMP3-207ENST00000485465 BHLHE41Q9C0J9 482 aaPredicted RBP16.5■□□□□ 0.23
CHMP3-207ENST00000485465 GIMAP4Q9NUV9 329 aa16.5■□□□□ 0.23
CHMP3-207ENST00000485465 C3orf18Q9UK00 162 aa16.5■□□□□ 0.23
CHMP3-207ENST00000485465 PADI2Q9Y2J8 665 aa16.5■□□□□ 0.23
CHMP3-207ENST00000485465 CLDN16Q9Y5I7 305 aa16.5■□□□□ 0.23
CHMP3-207ENST00000485465 ZNF780BQ9Y6R6 833 aa16.5■□□□□ 0.23
CHMP3-207ENST00000485465 SPTBN4Q9H254 2564 aa16.49■□□□□ 0.23
CHMP3-207ENST00000485465 IGKV3D-11A0A0A0MRZ8 115 aa16.49■□□□□ 0.23
CHMP3-207ENST00000485465 IL6P05231 212 aa16.49■□□□□ 0.23
CHMP3-207ENST00000485465 CYC1P08574 325 aa16.49■□□□□ 0.23
CHMP3-207ENST00000485465 C8orf89P0DMQ9 161 aa16.49■□□□□ 0.23
CHMP3-207ENST00000485465 F8A1P23610 371 aa16.49■□□□□ 0.23
CHMP3-207ENST00000485465 PTPN4P29074 926 aa16.49■□□□□ 0.23
CHMP3-207ENST00000485465 FOLR3P41439 243 aa16.49■□□□□ 0.23
CHMP3-207ENST00000485465 KIR3DL1P43629 444 aa16.49■□□□□ 0.23
CHMP3-207ENST00000485465 DGKQP52824 942 aa16.49■□□□□ 0.23
CHMP3-207ENST00000485465 KCNK10P57789 538 aa16.49■□□□□ 0.23
CHMP3-207ENST00000485465 PHC1P78364 1004 aa16.49■□□□□ 0.23
CHMP3-207ENST00000485465 BIKQ13323 160 aa16.49■□□□□ 0.23
CHMP3-207ENST00000485465 SERTAD2Q14140 314 aa16.49■□□□□ 0.23
CHMP3-207ENST00000485465 RCAN2Q14206 197 aa16.49■□□□□ 0.23
CHMP3-207ENST00000485465 ZNF750Q32MQ0 723 aa16.49■□□□□ 0.23
CHMP3-207ENST00000485465 FAM69BQ5VUD6 431 aa16.49■□□□□ 0.23
CHMP3-207ENST00000485465 OR4F3Q6IEY1 312 aa16.49■□□□□ 0.23
CHMP3-207ENST00000485465 FAM180BQ6P0A1 224 aa16.49■□□□□ 0.23
CHMP3-207ENST00000485465 GK5Q6ZS86 529 aa16.49■□□□□ 0.23
CHMP3-207ENST00000485465 SAMD14Q8IZD0 417 aaPredicted RBP16.49■□□□□ 0.23
CHMP3-207ENST00000485465 NATD1Q8N6N6 113 aa16.49■□□□□ 0.23
CHMP3-207ENST00000485465 C7orf57Q8NEG2 295 aa16.49■□□□□ 0.23
CHMP3-207ENST00000485465 FGF11Q92914 225 aa16.49■□□□□ 0.23
CHMP3-207ENST00000485465 TSLPQ969D9 159 aa16.49■□□□□ 0.23
CHMP3-207ENST00000485465 CIDECQ96AQ7 238 aaPredicted RBP16.49■□□□□ 0.23
CHMP3-207ENST00000485465 CNRIP1Q96F85 164 aaPredicted RBP16.49■□□□□ 0.23
CHMP3-207ENST00000485465 ALOXE3Q9BYJ1 711 aa16.49■□□□□ 0.23
CHMP3-207ENST00000485465 KCND3Q9UK17 655 aa16.49■□□□□ 0.23
CHMP3-207ENST00000485465 TCFL5Q9UL49 500 aa16.49■□□□□ 0.23
CHMP3-207ENST00000485465 ENTPD4Q9Y227 616 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms