RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 BRF2Q9HAW0 419 aa15.15■□□□□ 0.02
DDR1-246ENST00000485023 TNFRSF12AQ9NP84 129 aa15.15■□□□□ 0.02
DDR1-246ENST00000485023 ZNF223Q9UK11 482 aaPredicted RBP15.15■□□□□ 0.02
DDR1-246ENST00000485023 PCDHGA10Q9Y5H3 936 aa15.15■□□□□ 0.02
DDR1-246ENST00000485023 DOCK10Q96BY6 2186 aa15.15■□□□□ 0.02
DDR1-246ENST00000485023 A0A1W2PS29 197 aa15.14■□□□□ 0.01
DDR1-246ENST00000485023 BLACEA4D250 179 aa15.14■□□□□ 0.01
DDR1-246ENST00000485023 OR5H15A6NDH6 313 aa15.14■□□□□ 0.01
DDR1-246ENST00000485023 GABRR3A8MPY1 467 aa15.14■□□□□ 0.01
DDR1-246ENST00000485023 TNFSF10P50591 281 aa15.14■□□□□ 0.01
DDR1-246ENST00000485023 CLCN2P51788 898 aa15.14■□□□□ 0.01
DDR1-246ENST00000485023 OC90Q02509 493 aaPredicted RBP15.14■□□□□ 0.01
DDR1-246ENST00000485023 BTKQ06187 659 aa15.14■□□□□ 0.01
DDR1-246ENST00000485023 CSTF3Q12996 717 aaKnown RBP15.14■□□□□ 0.01
DDR1-246ENST00000485023 SERTAD2Q14140 314 aa15.14■□□□□ 0.01
DDR1-246ENST00000485023 CLEC6AQ6EIG7 209 aa15.14■□□□□ 0.01
DDR1-246ENST00000485023 H3F3CQ6NXT2 135 aa15.14■□□□□ 0.01
DDR1-246ENST00000485023 DGAT2L6Q6ZPD8 337 aa15.14■□□□□ 0.01
DDR1-246ENST00000485023 ZCCHC23Q6ZST2 131 aa15.14■□□□□ 0.01
DDR1-246ENST00000485023 RPS19BP1Q86WX3 136 aaKnown RBP15.14■□□□□ 0.01
DDR1-246ENST00000485023 MMP21Q8N119 569 aa15.14■□□□□ 0.01
DDR1-246ENST00000485023 TMEM132CQ8N3T6 1108 aa15.14■□□□□ 0.01
DDR1-246ENST00000485023 APCDD1LQ8NCL9 501 aa15.14■□□□□ 0.01
DDR1-246ENST00000485023 OR14A16Q8NHC5 309 aa15.14■□□□□ 0.01
DDR1-246ENST00000485023 PTPMT1Q8WUK0 201 aaPredicted RBP15.14■□□□□ 0.01
DDR1-246ENST00000485023 SNRNP40Q96DI7 357 aaKnown RBP15.14■□□□□ 0.01
DDR1-246ENST00000485023 VMP1Q96GC9 406 aa15.14■□□□□ 0.01
DDR1-246ENST00000485023 GATA5Q9BWX5 397 aaPredicted RBP15.14■□□□□ 0.01
DDR1-246ENST00000485023 LIN28AQ9H9Z2 209 aaKnown RBP15.14■□□□□ 0.01
DDR1-246ENST00000485023 WDR41Q9HAD4 459 aa15.14■□□□□ 0.01
DDR1-246ENST00000485023 ASF1BQ9NVP2 202 aa15.14■□□□□ 0.01
DDR1-246ENST00000485023 NMRK1Q9NWW6 199 aa15.14■□□□□ 0.01
DDR1-246ENST00000485023 ABI3Q9P2A4 366 aa15.14■□□□□ 0.01
DDR1-246ENST00000485023 VPS29Q9UBQ0 182 aa15.14■□□□□ 0.01
DDR1-246ENST00000485023 VTI1BQ9UEU0 232 aa15.14■□□□□ 0.01
DDR1-246ENST00000485023 NTNG1Q9Y2I2 539 aa15.14■□□□□ 0.01
DDR1-246ENST00000485023 CCDC151A5D8V7 595 aa15.13■□□□□ 0.01
DDR1-246ENST00000485023 CYSRT1A8MQ03 144 aa15.13■□□□□ 0.01
DDR1-246ENST00000485023 PRKNO60260 465 aaPredicted RBP15.13■□□□□ 0.01
DDR1-246ENST00000485023 OR10H2O60403 315 aa15.13■□□□□ 0.01
DDR1-246ENST00000485023 TRIM13O60858 407 aa15.13■□□□□ 0.01
DDR1-246ENST00000485023 ERLIN1O75477 346 aa15.13■□□□□ 0.01
DDR1-246ENST00000485023 STT3AP46977 705 aa15.13■□□□□ 0.01
DDR1-246ENST00000485023 PLIN5Q00G26 463 aa15.13■□□□□ 0.01
DDR1-246ENST00000485023 TUBA3CQ13748 450 aa15.13■□□□□ 0.01
DDR1-246ENST00000485023 TERF2Q15554 542 aa15.13■□□□□ 0.01
DDR1-246ENST00000485023 NDUFAF5Q5TEU4 345 aa15.13■□□□□ 0.01
DDR1-246ENST00000485023 OR52E8Q6IFG1 317 aa15.13■□□□□ 0.01
DDR1-246ENST00000485023 TUBA3EQ6PEY2 450 aa15.13■□□□□ 0.01
DDR1-246ENST00000485023 C16orf47Q6ZP98 133 aaPredicted RBP15.13■□□□□ 0.01
DDR1-246ENST00000485023 CPAMD8Q8IZJ3 1885 aa15.13■□□□□ 0.01
DDR1-246ENST00000485023 SLC2A12Q8TD20 617 aa15.13■□□□□ 0.01
DDR1-246ENST00000485023 HAS2Q92819 552 aa15.13■□□□□ 0.01
DDR1-246ENST00000485023 TANKQ92844 425 aa15.13■□□□□ 0.01
DDR1-246ENST00000485023 DAZLQ92904 295 aaKnown RBP15.13■□□□□ 0.01
DDR1-246ENST00000485023 APIPQ96GX9 242 aa15.13■□□□□ 0.01
DDR1-246ENST00000485023 HELZ2Q9BYK8 2649 aaKnown RBP15.13■□□□□ 0.01
DDR1-246ENST00000485023 ADAM29Q9UKF5 820 aa15.13■□□□□ 0.01
DDR1-246ENST00000485023 COPG1Q9Y678 874 aaKnown RBP15.13■□□□□ 0.01
DDR1-246ENST00000485023 TRAV17A0A0B4J275 112 aa15.12■□□□□ 0.01
DDR1-246ENST00000485023 HRKO00198 91 aa15.12■□□□□ 0.01
DDR1-246ENST00000485023 PGRMC2O15173 223 aa15.12■□□□□ 0.01
DDR1-246ENST00000485023 TYROBPO43914 113 aa15.12■□□□□ 0.01
DDR1-246ENST00000485023 CHRNGP07510 517 aa15.12■□□□□ 0.01
DDR1-246ENST00000485023 HSD3B1P14060 373 aa15.12■□□□□ 0.01
DDR1-246ENST00000485023 COX7A2P14406 83 aa15.12■□□□□ 0.01
DDR1-246ENST00000485023 ALOX15P16050 662 aaPredicted RBP15.12■□□□□ 0.01
DDR1-246ENST00000485023 HSD3B2P26439 372 aa15.12■□□□□ 0.01
DDR1-246ENST00000485023 UQCRFS1P47985 274 aa15.12■□□□□ 0.01
DDR1-246ENST00000485023 ALDH9A1P49189 494 aa15.12■□□□□ 0.01
DDR1-246ENST00000485023 IGLV3-21P80748 117 aaPredicted RBP15.12■□□□□ 0.01
DDR1-246ENST00000485023 SRSF11Q05519 484 aaKnown RBP15.12■□□□□ 0.01
DDR1-246ENST00000485023 IMPG1Q17R60 797 aa15.12■□□□□ 0.01
DDR1-246ENST00000485023 SPDYAQ5MJ70 313 aa15.12■□□□□ 0.01
DDR1-246ENST00000485023 ZNF468Q5VIY5 522 aaPredicted RBP15.12■□□□□ 0.01
DDR1-246ENST00000485023 ATCAYQ86WG3 371 aa15.12■□□□□ 0.01
DDR1-246ENST00000485023 CDC26Q8NHZ8 85 aa15.12■□□□□ 0.01
DDR1-246ENST00000485023 SUN3Q8TAQ9 357 aa15.12■□□□□ 0.01
DDR1-246ENST00000485023 AGR3Q8TD06 166 aa15.12■□□□□ 0.01
DDR1-246ENST00000485023 PKNOX2Q96KN3 472 aa15.12■□□□□ 0.01
DDR1-246ENST00000485023 SIGLEC12Q96PQ1 595 aa15.12■□□□□ 0.01
DDR1-246ENST00000485023 UTP23Q9BRU9 249 aaKnown RBP15.12■□□□□ 0.01
DDR1-246ENST00000485023 CNPPD1Q9BV87 410 aa15.12■□□□□ 0.01
DDR1-246ENST00000485023 EBPLQ9BY08 206 aa15.12■□□□□ 0.01
DDR1-246ENST00000485023 HES7Q9BYE0 225 aa15.12■□□□□ 0.01
DDR1-246ENST00000485023 RNF32Q9H0A6 362 aa15.12■□□□□ 0.01
DDR1-246ENST00000485023 KLHL1Q9NR64 748 aa15.12■□□□□ 0.01
DDR1-246ENST00000485023 PTGDR2Q9Y5Y4 395 aa15.12■□□□□ 0.01
DDR1-246ENST00000485023 GNG14A0A1W2PPG7 69 aa15.11■□□□□ 0.01
DDR1-246ENST00000485023 WDR91A4D1P6 747 aa15.11■□□□□ 0.01
DDR1-246ENST00000485023 SYNDIG1LA6NDD5 238 aa15.11■□□□□ 0.01
DDR1-246ENST00000485023 PCDH7O60245 1069 aa15.11■□□□□ 0.01
DDR1-246ENST00000485023 VPS4BO75351 444 aa15.11■□□□□ 0.01
DDR1-246ENST00000485023 GPR75O95800 540 aa15.11■□□□□ 0.01
DDR1-246ENST00000485023 DDAH2O95865 285 aa15.11■□□□□ 0.01
DDR1-246ENST00000485023 PTGER1P34995 402 aa15.11■□□□□ 0.01
DDR1-246ENST00000485023 CD96P40200 585 aa15.11■□□□□ 0.01
DDR1-246ENST00000485023 GPR143P51810 404 aa15.11■□□□□ 0.01
DDR1-246ENST00000485023 MLF1P58340 268 aa15.11■□□□□ 0.01
DDR1-246ENST00000485023 NAA20P61599 178 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms