RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 METTL2BQ6P1Q9 378 aaKnown RBP10.6□□□□□ -0.71
SCFD1-206ENST00000484733 RAPH1Q70E73 1250 aa10.6□□□□□ -0.71
SCFD1-206ENST00000484733 TRILQ7L0X0 811 aa10.6□□□□□ -0.71
SCFD1-206ENST00000484733 FBF1Q8TES7 1133 aa10.6□□□□□ -0.71
SCFD1-206ENST00000484733 DGAT2Q96PD7 388 aa10.6□□□□□ -0.71
SCFD1-206ENST00000484733 PELOQ9BRX2 385 aaKnown RBP10.6□□□□□ -0.71
SCFD1-206ENST00000484733 RAB17Q9H0T7 212 aa10.6□□□□□ -0.71
SCFD1-206ENST00000484733 PCNX1Q96RV3 2341 aa10.6□□□□□ -0.71
SCFD1-206ENST00000484733 HCFC1P51610 2035 aa10.6□□□□□ -0.71
SCFD1-206ENST00000484733 A0A0G2JMM0 328 aa10.59□□□□□ -0.71
SCFD1-206ENST00000484733 A0A1W2PPB8 328 aa10.59□□□□□ -0.71
SCFD1-206ENST00000484733 A0A1W2PRS3 328 aa10.59□□□□□ -0.71
SCFD1-206ENST00000484733 KIR3DP1A8MWS1 328 aa10.59□□□□□ -0.71
SCFD1-206ENST00000484733 UBXN8O00124 270 aa10.59□□□□□ -0.71
SCFD1-206ENST00000484733 AQP7O14520 342 aa10.59□□□□□ -0.71
SCFD1-206ENST00000484733 DYRK3O43781 588 aa10.59□□□□□ -0.71
SCFD1-206ENST00000484733 KLK8O60259 260 aa10.59□□□□□ -0.71
SCFD1-206ENST00000484733 SUSD5O60279 629 aa10.59□□□□□ -0.71
SCFD1-206ENST00000484733 UGDHO60701 494 aa10.59□□□□□ -0.71
SCFD1-206ENST00000484733 ZNF354AO60765 605 aaPredicted RBP10.59□□□□□ -0.71
SCFD1-206ENST00000484733 FAM155BO75949 473 aa10.59□□□□□ -0.71
SCFD1-206ENST00000484733 TOXO94900 526 aa10.59□□□□□ -0.71
SCFD1-206ENST00000484733 NADKO95544 446 aaPredicted RBP10.59□□□□□ -0.71
SCFD1-206ENST00000484733 P04436 131 aa10.59□□□□□ -0.71
SCFD1-206ENST00000484733 PLTPP55058 493 aa10.59□□□□□ -0.71
SCFD1-206ENST00000484733 NUP107P57740 925 aa10.59□□□□□ -0.71
SCFD1-206ENST00000484733 SLAMF1Q13291 335 aa10.59□□□□□ -0.71
SCFD1-206ENST00000484733 MRM1Q6IN84 353 aaKnown RBP10.59□□□□□ -0.71
SCFD1-206ENST00000484733 LYPD8Q6UX82 237 aa10.59□□□□□ -0.71
SCFD1-206ENST00000484733 ZDHHC24Q6UX98 284 aa10.59□□□□□ -0.71
SCFD1-206ENST00000484733 CMC1Q7Z7K0 106 aa10.59□□□□□ -0.71
SCFD1-206ENST00000484733 TMEM251Q8N6I4 163 aa10.59□□□□□ -0.71
SCFD1-206ENST00000484733 EXT2Q93063 718 aa10.59□□□□□ -0.71
SCFD1-206ENST00000484733 SENP5Q96HI0 755 aaPredicted RBP10.59□□□□□ -0.71
SCFD1-206ENST00000484733 CENPKQ9BS16 269 aa10.59□□□□□ -0.71
SCFD1-206ENST00000484733 RPF2Q9H7B2 306 aaKnown RBP10.59□□□□□ -0.71
SCFD1-206ENST00000484733 DMRT3Q9NQL9 472 aa10.59□□□□□ -0.71
SCFD1-206ENST00000484733 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.59□□□□□ -0.715e-6■■■■□ 22.2
SCFD1-206ENST00000484733 ACOT9Q9Y305 439 aa10.59□□□□□ -0.71
SCFD1-206ENST00000484733 ATG4BQ9Y4P1 393 aa10.59□□□□□ -0.71
SCFD1-206ENST00000484733 PCDHGA11Q9Y5H2 935 aa10.59□□□□□ -0.71
SCFD1-206ENST00000484733 FAM166BA8MTA8 275 aa10.59□□□□□ -0.71
SCFD1-206ENST00000484733 H0YIV9 168 aa10.59□□□□□ -0.71
SCFD1-206ENST00000484733 HCN1O60741 890 aa10.59□□□□□ -0.71
SCFD1-206ENST00000484733 HOXD4P09016 255 aaPredicted RBP10.59□□□□□ -0.71
SCFD1-206ENST00000484733 PTX3P26022 381 aaPredicted RBP10.59□□□□□ -0.71
SCFD1-206ENST00000484733 MSX1P28360 303 aa10.59□□□□□ -0.71
SCFD1-206ENST00000484733 TLX1P31314 330 aaPredicted RBP10.59□□□□□ -0.71
SCFD1-206ENST00000484733 GMPRP36959 345 aa10.59□□□□□ -0.71
SCFD1-206ENST00000484733 TNFRSF17Q02223 184 aa10.59□□□□□ -0.71
SCFD1-206ENST00000484733 TLE4Q04727 773 aa10.59□□□□□ -0.71
SCFD1-206ENST00000484733 C2orf54Q08AI8 447 aa10.59□□□□□ -0.71
SCFD1-206ENST00000484733 SETDB1Q15047 1291 aa10.59□□□□□ -0.71
SCFD1-206ENST00000484733 PCBP2Q15366 365 aaKnown RBP eCLIP10.59□□□□□ -0.711e-6■■■□□ 18.2
SCFD1-206ENST00000484733 TESK1Q15569 626 aa10.59□□□□□ -0.71
SCFD1-206ENST00000484733 SPRED3Q2MJR0 410 aa10.59□□□□□ -0.71
SCFD1-206ENST00000484733 ZNF572Q7Z3I7 529 aaPredicted RBP10.59□□□□□ -0.71
SCFD1-206ENST00000484733 GPR180Q86V85 440 aa10.59□□□□□ -0.71
SCFD1-206ENST00000484733 TEX9Q8N6V9 391 aa10.59□□□□□ -0.71
SCFD1-206ENST00000484733 HUS1BQ8NHY5 278 aa10.59□□□□□ -0.71
SCFD1-206ENST00000484733 SLC22A8Q8TCC7 542 aa10.59□□□□□ -0.71
SCFD1-206ENST00000484733 FBXO25Q8TCJ0 367 aa10.59□□□□□ -0.71
SCFD1-206ENST00000484733 PAQR8Q8TEZ7 354 aa10.59□□□□□ -0.71
SCFD1-206ENST00000484733 NXNL1Q96CM4 212 aa10.59□□□□□ -0.71
SCFD1-206ENST00000484733 FBXL20Q96IG2 436 aa10.59□□□□□ -0.71
SCFD1-206ENST00000484733 OR51B5Q9H339 312 aa10.59□□□□□ -0.71
SCFD1-206ENST00000484733 KCNJ16Q9NPI9 418 aa10.59□□□□□ -0.71
SCFD1-206ENST00000484733 LYARQ9NX58 379 aaKnown RBP10.59□□□□□ -0.71
SCFD1-206ENST00000484733 PKDREJQ9NTG1 2253 aa10.58□□□□□ -0.72
SCFD1-206ENST00000484733 PLPP1O14494 284 aa10.58□□□□□ -0.72
SCFD1-206ENST00000484733 ALOX15P16050 662 aaPredicted RBP10.58□□□□□ -0.72
SCFD1-206ENST00000484733 ACVR2AP27037 513 aa10.58□□□□□ -0.72
SCFD1-206ENST00000484733 NR0B1P51843 470 aaKnown RBP10.58□□□□□ -0.72
SCFD1-206ENST00000484733 RAP1GDS1P52306 607 aa10.58□□□□□ -0.72
SCFD1-206ENST00000484733 KRTAP10-9P60411 292 aa10.58□□□□□ -0.72
SCFD1-206ENST00000484733 PHEXP78562 749 aa10.58□□□□□ -0.72
SCFD1-206ENST00000484733 PLIN5Q00G26 463 aa10.58□□□□□ -0.72
SCFD1-206ENST00000484733 ID2Q02363 134 aa10.58□□□□□ -0.72
SCFD1-206ENST00000484733 PMPCAQ10713 525 aa10.58□□□□□ -0.72
SCFD1-206ENST00000484733 SLC10A1Q14973 349 aa10.58□□□□□ -0.72
SCFD1-206ENST00000484733 SLMAPQ14BN4 828 aa10.58□□□□□ -0.72
SCFD1-206ENST00000484733 ACAP2Q15057 778 aa10.58□□□□□ -0.72
SCFD1-206ENST00000484733 FAM83EQ2M2I3 478 aa10.58□□□□□ -0.72
SCFD1-206ENST00000484733 ADGRD1Q6QNK2 874 aa10.58□□□□□ -0.72
SCFD1-206ENST00000484733 FAM47EQ6ZV65 393 aa10.58□□□□□ -0.72
SCFD1-206ENST00000484733 C9orf40Q8IXQ3 194 aa10.58□□□□□ -0.72
SCFD1-206ENST00000484733 ST13P4Q8IZP2 240 aaPredicted RBP10.58□□□□□ -0.72
SCFD1-206ENST00000484733 CENPLQ8N0S6 344 aaPredicted RBP10.58□□□□□ -0.72
SCFD1-206ENST00000484733 REPS1Q96D71 796 aa10.58□□□□□ -0.72
SCFD1-206ENST00000484733 RBM18Q96H35 190 aaKnown RBP10.58□□□□□ -0.72
SCFD1-206ENST00000484733 SMC6Q96SB8 1091 aa10.58□□□□□ -0.72
SCFD1-206ENST00000484733 SLC24A3Q9HC58 644 aa10.58□□□□□ -0.72
SCFD1-206ENST00000484733 NPDC1Q9NQX5 325 aaPredicted RBP10.58□□□□□ -0.72
SCFD1-206ENST00000484733 PNPLA3Q9NST1 481 aa10.58□□□□□ -0.72
SCFD1-206ENST00000484733 TUBA8Q9NY65 449 aaPredicted RBP10.58□□□□□ -0.72
SCFD1-206ENST00000484733 OR6C76A6NM76 312 aa10.58□□□□□ -0.72
SCFD1-206ENST00000484733 FIGNL2A6NMB9 653 aa10.58□□□□□ -0.72
SCFD1-206ENST00000484733 NPIPA2E9PIF3 369 aa10.58□□□□□ -0.72
SCFD1-206ENST00000484733 NPIPA3F8WFD2 350 aa10.58□□□□□ -0.72
SCFD1-206ENST00000484733 PROM1O43490 865 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms