RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 LTA4HP09960 611 aaKnown RBP16.66■□□□□ 0.26
ATG4B-221ENST00000483778 HPDP32754 393 aaPredicted RBP16.66■□□□□ 0.26
ATG4B-221ENST00000483778 PIGAP37287 484 aa16.66■□□□□ 0.26
ATG4B-221ENST00000483778 SSR2P43308 183 aa16.66■□□□□ 0.26
ATG4B-221ENST00000483778 MAGEA5P43359 124 aa16.66■□□□□ 0.26
ATG4B-221ENST00000483778 NUP107P57740 925 aa16.66■□□□□ 0.26
ATG4B-221ENST00000483778 IGLV3-21P80748 117 aaPredicted RBP16.66■□□□□ 0.26
ATG4B-221ENST00000483778 SLC7A5Q01650 507 aa16.66■□□□□ 0.26
ATG4B-221ENST00000483778 ASPHQ12797 758 aa16.66■□□□□ 0.26
ATG4B-221ENST00000483778 ILF2Q12905 390 aaKnown RBP16.66■□□□□ 0.26
ATG4B-221ENST00000483778 SERTAD2Q14140 314 aa16.66■□□□□ 0.26
ATG4B-221ENST00000483778 GXYLT1Q4G148 440 aa16.66■□□□□ 0.26
ATG4B-221ENST00000483778 TMEM35AQ53FP2 167 aa16.66■□□□□ 0.26
ATG4B-221ENST00000483778 PIGGQ5H8A4 983 aa16.66■□□□□ 0.26
ATG4B-221ENST00000483778 ADGRD1Q6QNK2 874 aa16.66■□□□□ 0.26
ATG4B-221ENST00000483778 LYPD8Q6UX82 237 aa16.66■□□□□ 0.26
ATG4B-221ENST00000483778 CHSY3Q70JA7 882 aa16.66■□□□□ 0.26
ATG4B-221ENST00000483778 GPALPP1Q8IXQ4 340 aa16.66■□□□□ 0.26
ATG4B-221ENST00000483778 TMEM251Q8N6I4 163 aa16.66■□□□□ 0.26
ATG4B-221ENST00000483778 LILRB4Q8NHJ6 448 aa16.66■□□□□ 0.26
ATG4B-221ENST00000483778 CMTM7Q96FZ5 175 aa16.66■□□□□ 0.26
ATG4B-221ENST00000483778 MTERF1Q99551 399 aaKnown RBP16.66■□□□□ 0.26
ATG4B-221ENST00000483778 TREX2Q9BQ50 279 aaPredicted RBP16.66■□□□□ 0.26
ATG4B-221ENST00000483778 ZNF717Q9BY31 904 aaPredicted RBP16.66■□□□□ 0.26
ATG4B-221ENST00000483778 PHACTR1Q9C0D0 580 aa16.66■□□□□ 0.26
ATG4B-221ENST00000483778 TUBA8Q9NY65 449 aaPredicted RBP16.66■□□□□ 0.26
ATG4B-221ENST00000483778 A0A1W2PS29 197 aa16.65■□□□□ 0.26
ATG4B-221ENST00000483778 EEDO75530 441 aaKnown RBP16.65■□□□□ 0.26
ATG4B-221ENST00000483778 TOXO94900 526 aa16.65■□□□□ 0.26
ATG4B-221ENST00000483778 NADKO95544 446 aaPredicted RBP16.65■□□□□ 0.26
ATG4B-221ENST00000483778 IGKV3-11P04433 115 aa16.65■□□□□ 0.26
ATG4B-221ENST00000483778 C2P06681 752 aa16.65■□□□□ 0.26
ATG4B-221ENST00000483778 CRABP2P29373 138 aa16.65■□□□□ 0.26
ATG4B-221ENST00000483778 FOLH1Q04609 750 aa16.65■□□□□ 0.26
ATG4B-221ENST00000483778 TFF3Q07654 80 aa16.65■□□□□ 0.26
ATG4B-221ENST00000483778 RCN2Q14257 317 aa16.65■□□□□ 0.26
ATG4B-221ENST00000483778 ZNF791Q3KP31 576 aaPredicted RBP16.65■□□□□ 0.26
ATG4B-221ENST00000483778 MROH9Q5TGP6 573 aa16.65■□□□□ 0.26
ATG4B-221ENST00000483778 GRHL2Q6ISB3 625 aa16.65■□□□□ 0.26
ATG4B-221ENST00000483778 ARHGAP11AQ6P4F7 1023 aa16.65■□□□□ 0.26
ATG4B-221ENST00000483778 RTL4Q6ZR62 310 aa16.65■□□□□ 0.26
ATG4B-221ENST00000483778 TBC1D1Q86TI0 1168 aaPredicted RBP16.65■□□□□ 0.26
ATG4B-221ENST00000483778 C9orf40Q8IXQ3 194 aa16.65■□□□□ 0.26
ATG4B-221ENST00000483778 SRFBP1Q8NEF9 429 aaKnown RBP16.65■□□□□ 0.26
ATG4B-221ENST00000483778 OR8K3Q8NH51 312 aa16.65■□□□□ 0.26
ATG4B-221ENST00000483778 GPR78Q96P69 363 aa16.65■□□□□ 0.26
ATG4B-221ENST00000483778 ROGDIQ9GZN7 287 aa16.65■□□□□ 0.26
ATG4B-221ENST00000483778 PROK2Q9HC23 129 aa16.65■□□□□ 0.26
ATG4B-221ENST00000483778 PRM3Q9NNZ6 103 aa16.65■□□□□ 0.26
ATG4B-221ENST00000483778 DMRT3Q9NQL9 472 aa16.65■□□□□ 0.26
ATG4B-221ENST00000483778 ACOT9Q9Y305 439 aa16.65■□□□□ 0.26
ATG4B-221ENST00000483778 EXPH5Q8NEV8 1989 aa16.65■□□□□ 0.26
ATG4B-221ENST00000483778 MED12Q93074 2177 aa16.65■□□□□ 0.26
ATG4B-221ENST00000483778 AKAP6Q13023 2319 aa16.64■□□□□ 0.25
ATG4B-221ENST00000483778 ESYT3A0FGR9 886 aa16.64■□□□□ 0.25
ATG4B-221ENST00000483778 GLOD5A6NK44 160 aa16.64■□□□□ 0.25
ATG4B-221ENST00000483778 FAM90A27PA6NNH2 459 aa16.64■□□□□ 0.25
ATG4B-221ENST00000483778 TMPRSS11DO60235 418 aa16.64■□□□□ 0.25
ATG4B-221ENST00000483778 SSTR2P30874 369 aa16.64■□□□□ 0.25
ATG4B-221ENST00000483778 STT3AP46977 705 aa16.64■□□□□ 0.25
ATG4B-221ENST00000483778 PIK3CGP48736 1102 aa16.64■□□□□ 0.25
ATG4B-221ENST00000483778 NEK2P51955 445 aa16.64■□□□□ 0.25
ATG4B-221ENST00000483778 RPS13P62277 151 aaKnown RBP16.64■□□□□ 0.25
ATG4B-221ENST00000483778 TLE4Q04727 773 aa16.64■□□□□ 0.25
ATG4B-221ENST00000483778 PFKFB4Q16877 469 aa16.64■□□□□ 0.25
ATG4B-221ENST00000483778 FAM219BQ5XKK7 198 aa16.64■□□□□ 0.25
ATG4B-221ENST00000483778 RTL6Q6ICC9 239 aa16.64■□□□□ 0.25
ATG4B-221ENST00000483778 GPR180Q86V85 440 aa16.64■□□□□ 0.25
ATG4B-221ENST00000483778 RGMAQ96B86 450 aa16.64■□□□□ 0.25
ATG4B-221ENST00000483778 FAM173AQ9BQD7 235 aa16.64■□□□□ 0.25
ATG4B-221ENST00000483778 CNPPD1Q9BV87 410 aa16.64■□□□□ 0.25
ATG4B-221ENST00000483778 TP63Q9H3D4 680 aaPredicted RBP16.64■□□□□ 0.25
ATG4B-221ENST00000483778 RPF2Q9H7B2 306 aaKnown RBP16.64■□□□□ 0.25
ATG4B-221ENST00000483778 SH2D2AQ9NP31 389 aa16.64■□□□□ 0.25
ATG4B-221ENST00000483778 ZNF358Q9NW07 568 aa16.64■□□□□ 0.25
ATG4B-221ENST00000483778 COQ3Q9NZJ6 369 aa16.64■□□□□ 0.25
ATG4B-221ENST00000483778 UTP11Q9Y3A2 253 aaKnown RBP16.64■□□□□ 0.25
ATG4B-221ENST00000483778 RNF11Q9Y3C5 154 aa16.64■□□□□ 0.25
ATG4B-221ENST00000483778 ASB4Q9Y574 426 aa16.64■□□□□ 0.25
ATG4B-221ENST00000483778 KIAA1549Q9HCM3 1950 aa16.64■□□□□ 0.25
ATG4B-221ENST00000483778 MPDZO75970 2070 aa16.63■□□□□ 0.25
ATG4B-221ENST00000483778 ATP6AP2A0A1C7CYW4 349 aa16.63■□□□□ 0.25
ATG4B-221ENST00000483778 A0A1W2PR48 441 aa16.63■□□□□ 0.25
ATG4B-221ENST00000483778 PROM1O43490 865 aa16.63■□□□□ 0.25
ATG4B-221ENST00000483778 ATP6AP2O75787 350 aa16.63■□□□□ 0.25
ATG4B-221ENST00000483778 LRATO95237 230 aa16.63■□□□□ 0.25
ATG4B-221ENST00000483778 SIX3O95343 332 aaPredicted RBP16.63■□□□□ 0.25
ATG4B-221ENST00000483778 IGHG3P01860 377 aa16.63■□□□□ 0.25
ATG4B-221ENST00000483778 RFPL3SP0C7P2 107 aa16.63■□□□□ 0.25
ATG4B-221ENST00000483778 EPB42P16452 691 aa16.63■□□□□ 0.25
ATG4B-221ENST00000483778 IGFBP2P18065 325 aa16.63■□□□□ 0.25
ATG4B-221ENST00000483778 CASQ1P31415 396 aa16.63■□□□□ 0.25
ATG4B-221ENST00000483778 BSGP35613 385 aa16.63■□□□□ 0.25
ATG4B-221ENST00000483778 SETDB1Q15047 1291 aa16.63■□□□□ 0.25
ATG4B-221ENST00000483778 TMEM211Q6ICI0 200 aa16.63■□□□□ 0.25
ATG4B-221ENST00000483778 MRM1Q6IN84 353 aaKnown RBP16.63■□□□□ 0.25
ATG4B-221ENST00000483778 SYT10Q6XYQ8 523 aa16.63■□□□□ 0.25
ATG4B-221ENST00000483778 FAM47EQ6ZV65 393 aa16.63■□□□□ 0.25
ATG4B-221ENST00000483778 TRILQ7L0X0 811 aa16.63■□□□□ 0.25
ATG4B-221ENST00000483778 MYLK4Q86YV6 388 aaPredicted RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms