RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 PSME2Q9UL46 239 aa13.27□□□□□ -0.29
CLK3-204ENST00000483723 RNF215Q9Y6U7 377 aa13.27□□□□□ -0.29
CLK3-204ENST00000483723 PCDH15Q96QU1 1955 aa13.26□□□□□ -0.29
CLK3-204ENST00000483723 GLOD5A6NK44 160 aa13.26□□□□□ -0.29
CLK3-204ENST00000483723 TXNDC9O14530 226 aa13.26□□□□□ -0.29
CLK3-204ENST00000483723 NUDT21O43809 227 aaKnown RBP13.26□□□□□ -0.29
CLK3-204ENST00000483723 GALR3O60755 368 aaPredicted RBP13.26□□□□□ -0.29
CLK3-204ENST00000483723 DNAJB6O75190 326 aa13.26□□□□□ -0.29
CLK3-204ENST00000483723 NR2F6P10588 404 aa13.26□□□□□ -0.29
CLK3-204ENST00000483723 GNSP15586 552 aa13.26□□□□□ -0.29
CLK3-204ENST00000483723 NTSP30990 170 aa13.26□□□□□ -0.29
CLK3-204ENST00000483723 SOAT1P35610 550 aa13.26□□□□□ -0.29
CLK3-204ENST00000483723 DHPSP49366 369 aaPredicted RBP13.26□□□□□ -0.29
CLK3-204ENST00000483723 VSX2P58304 361 aaPredicted RBP13.26□□□□□ -0.29
CLK3-204ENST00000483723 FOLH1Q04609 750 aa13.26□□□□□ -0.29
CLK3-204ENST00000483723 DUSP2Q05923 314 aa13.26□□□□□ -0.29
CLK3-204ENST00000483723 HSPB3Q12988 150 aa13.26□□□□□ -0.29
CLK3-204ENST00000483723 NR1D2Q14995 579 aa13.26□□□□□ -0.29
CLK3-204ENST00000483723 PLK5Q496M5 336 aa13.26□□□□□ -0.29
CLK3-204ENST00000483723 TMTC4Q5T4D3 741 aa13.26□□□□□ -0.29
CLK3-204ENST00000483723 IRGCQ6NXR0 463 aa13.26□□□□□ -0.29
CLK3-204ENST00000483723 KANSL1Q7Z3B3 1105 aa13.26□□□□□ -0.29
CLK3-204ENST00000483723 SLC30A8Q8IWU4 369 aa13.26□□□□□ -0.29
CLK3-204ENST00000483723 GALNT4Q8N4A0 578 aa13.26□□□□□ -0.29
CLK3-204ENST00000483723 ZCCHC10Q8TBK6 192 aa13.26□□□□□ -0.29
CLK3-204ENST00000483723 SFXN5Q8TD22 340 aa13.26□□□□□ -0.29
CLK3-204ENST00000483723 MAL2Q969L2 176 aa13.26□□□□□ -0.29
CLK3-204ENST00000483723 TBC1D20Q96BZ9 403 aa13.26□□□□□ -0.29
CLK3-204ENST00000483723 NR1H4Q96RI1 486 aaPredicted RBP13.26□□□□□ -0.29
CLK3-204ENST00000483723 CD180Q99467 661 aa13.26□□□□□ -0.29
CLK3-204ENST00000483723 NPLQ9BXD5 320 aaPredicted RBP13.26□□□□□ -0.29
CLK3-204ENST00000483723 MAP4K5Q9Y4K4 846 aa13.26□□□□□ -0.29
CLK3-204ENST00000483723 SNX8Q9Y5X2 465 aa13.26□□□□□ -0.29
CLK3-204ENST00000483723 SAC3D1A6NKF1 404 aa13.25□□□□□ -0.29
CLK3-204ENST00000483723 SOCS2O14508 198 aa13.25□□□□□ -0.29
CLK3-204ENST00000483723 ERAL1O75616 437 aaKnown RBP13.25□□□□□ -0.29
CLK3-204ENST00000483723 MT-ND1P03886 318 aa13.25□□□□□ -0.29
CLK3-204ENST00000483723 EIF2S1P05198 315 aaKnown RBP13.25□□□□□ -0.29
CLK3-204ENST00000483723 CPN2P22792 545 aa13.25□□□□□ -0.29
CLK3-204ENST00000483723 BUD31P41223 144 aaPredicted RBP13.25□□□□□ -0.29
CLK3-204ENST00000483723 PRIM2P49643 509 aa13.25□□□□□ -0.29
CLK3-204ENST00000483723 NCBP2P52298 156 aaKnown RBP eCLIP13.25□□□□□ -0.299e-7■■■■□ 24.2
CLK3-204ENST00000483723 PCBP3P57721 371 aaKnown RBP13.25□□□□□ -0.29
CLK3-204ENST00000483723 DSTNP60981 165 aa13.25□□□□□ -0.29
CLK3-204ENST00000483723 CDK6Q00534 326 aa13.25□□□□□ -0.29
CLK3-204ENST00000483723 SRSF5Q13243 272 aaKnown RBP13.25□□□□□ -0.29
CLK3-204ENST00000483723 BIRC2Q13490 618 aa13.25□□□□□ -0.29
CLK3-204ENST00000483723 SCARB2Q14108 478 aa13.25□□□□□ -0.29
CLK3-204ENST00000483723 MYBPC3Q14896 1274 aa13.25□□□□□ -0.29
CLK3-204ENST00000483723 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.25□□□□□ -0.29
CLK3-204ENST00000483723 CRB2Q5IJ48 1285 aa13.25□□□□□ -0.29
CLK3-204ENST00000483723 PEAR1Q5VY43 1037 aaPredicted RBP13.25□□□□□ -0.29
CLK3-204ENST00000483723 ANGPTL8Q6UXH0 198 aa13.25□□□□□ -0.29
CLK3-204ENST00000483723 C1orf210Q8IVY1 113 aa13.25□□□□□ -0.29
CLK3-204ENST00000483723 ARL10Q8N8L6 244 aa13.25□□□□□ -0.29
CLK3-204ENST00000483723 TMEM121BQ9BXQ6 578 aaPredicted RBP13.25□□□□□ -0.29
CLK3-204ENST00000483723 EPB41L1Q9H4G0 881 aa13.25□□□□□ -0.29
CLK3-204ENST00000483723 A4GALTQ9NPC4 353 aa13.25□□□□□ -0.29
CLK3-204ENST00000483723 IL1RAPQ9NPH3 570 aa13.25□□□□□ -0.29
CLK3-204ENST00000483723 ENAMQ9NRM1 1142 aa13.25□□□□□ -0.29
CLK3-204ENST00000483723 LRIT1Q9P2V4 623 aa13.25□□□□□ -0.29
CLK3-204ENST00000483723 SUSD2Q9UGT4 822 aa13.25□□□□□ -0.29
CLK3-204ENST00000483723 TLCD2A6NGC4 264 aa13.25□□□□□ -0.29
CLK3-204ENST00000483723 RHPN2P1A8MT19 583 aa13.25□□□□□ -0.29
CLK3-204ENST00000483723 HRO43593 1189 aa13.25□□□□□ -0.29
CLK3-204ENST00000483723 RASAL1O95294 804 aa13.25□□□□□ -0.29
CLK3-204ENST00000483723 GLB1P16278 677 aa13.25□□□□□ -0.29
CLK3-204ENST00000483723 MPIP34949 423 aa13.25□□□□□ -0.29
CLK3-204ENST00000483723 GPR3P46089 330 aa13.25□□□□□ -0.29
CLK3-204ENST00000483723 CASP9P55211 416 aa13.25□□□□□ -0.29
CLK3-204ENST00000483723 CSTF1Q05048 431 aaKnown RBP13.25□□□□□ -0.29
CLK3-204ENST00000483723 IQCCQ4KMZ1 466 aa13.25□□□□□ -0.29
CLK3-204ENST00000483723 LRRC23Q53EV4 343 aaPredicted RBP13.25□□□□□ -0.29
CLK3-204ENST00000483723 OR52E8Q6IFG1 317 aa13.25□□□□□ -0.29
CLK3-204ENST00000483723 USP53Q70EK8 1073 aa13.25□□□□□ -0.29
CLK3-204ENST00000483723 PIWIL3Q7Z3Z3 882 aaKnown RBP13.25□□□□□ -0.29
CLK3-204ENST00000483723 SLC35F3Q8IY50 421 aa13.25□□□□□ -0.29
CLK3-204ENST00000483723 CCDC116Q8IYX3 515 aa13.25□□□□□ -0.29
CLK3-204ENST00000483723 SAMD14Q8IZD0 417 aaPredicted RBP13.25□□□□□ -0.29
CLK3-204ENST00000483723 CARFQ8N187 725 aa13.25□□□□□ -0.29
CLK3-204ENST00000483723 CBR4Q8N4T8 237 aa13.25□□□□□ -0.29
CLK3-204ENST00000483723 HORMAD2Q8N7B1 307 aa13.25□□□□□ -0.29
CLK3-204ENST00000483723 GATA6Q92908 595 aa13.25□□□□□ -0.29
CLK3-204ENST00000483723 MOAP1Q96BY2 351 aa13.25□□□□□ -0.29
CLK3-204ENST00000483723 ZC3H10Q96K80 434 aaKnown RBP13.25□□□□□ -0.29
CLK3-204ENST00000483723 SEMA3GQ9NS98 782 aa13.25□□□□□ -0.29
CLK3-204ENST00000483723 GIMAP4Q9NUV9 329 aa13.25□□□□□ -0.29
CLK3-204ENST00000483723 NTMQ9P121 344 aa13.25□□□□□ -0.29
CLK3-204ENST00000483723 SEMA5BQ9P283 1151 aa13.25□□□□□ -0.29
CLK3-204ENST00000483723 PADI4Q9UM07 663 aa13.25□□□□□ -0.29
CLK3-204ENST00000483723 OAZ3Q9UMX2 235 aa13.25□□□□□ -0.29
CLK3-204ENST00000483723 ENTPD4Q9Y227 616 aa13.25□□□□□ -0.29
CLK3-204ENST00000483723 VCANP13611 3396 aa13.24□□□□□ -0.29
CLK3-204ENST00000483723 IGHV1OR21-1A0A087WYE8 117 aa13.24□□□□□ -0.29
CLK3-204ENST00000483723 A0A1B0GTQ1 180 aa13.24□□□□□ -0.29
CLK3-204ENST00000483723 CYR61O00622 381 aa13.24□□□□□ -0.29
CLK3-204ENST00000483723 DLGAP1O14490 977 aa13.24□□□□□ -0.29
CLK3-204ENST00000483723 B4GAT1O43505 415 aa13.24□□□□□ -0.29
CLK3-204ENST00000483723 KIF1CO43896 1103 aaKnown RBP13.24□□□□□ -0.29
CLK3-204ENST00000483723 DPM1O60762 260 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms