RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 NFAM1Q8NET5 270 aaPredicted RBP14.6□□□□□ -0.07
RPP40-206ENST00000483546 BRIX1Q8TDN6 353 aaKnown RBP14.6□□□□□ -0.07
RPP40-206ENST00000483546 ELP5Q8TE02 316 aa14.6□□□□□ -0.07
RPP40-206ENST00000483546 PSMF1Q92530 271 aa14.6□□□□□ -0.07
RPP40-206ENST00000483546 ANKRD9Q96BM1 317 aaPredicted RBP14.6□□□□□ -0.07
RPP40-206ENST00000483546 RNF32Q9H0A6 362 aa14.6□□□□□ -0.07
RPP40-206ENST00000483546 KCNK13Q9HB14 408 aa14.6□□□□□ -0.07
RPP40-206ENST00000483546 TNFRSF12AQ9NP84 129 aa14.6□□□□□ -0.07
RPP40-206ENST00000483546 PNO1Q9NRX1 252 aaKnown RBP14.6□□□□□ -0.07
RPP40-206ENST00000483546 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.6□□□□□ -0.07
RPP40-206ENST00000483546 DNAJC15Q9Y5T4 150 aa14.6□□□□□ -0.07
RPP40-206ENST00000483546 CLCA3PQ9Y6N3 262 aa14.6□□□□□ -0.07
RPP40-206ENST00000483546 TGFBR3LH3BV60 316 aa14.59□□□□□ -0.07
RPP40-206ENST00000483546 K7EM74 188 aa14.59□□□□□ -0.07
RPP40-206ENST00000483546 PCDH7O60245 1069 aa14.59□□□□□ -0.07
RPP40-206ENST00000483546 FGF17O60258 216 aa14.59□□□□□ -0.07
RPP40-206ENST00000483546 LDB3O75112 727 aa14.59□□□□□ -0.07
RPP40-206ENST00000483546 C1QL1O75973 258 aa14.59□□□□□ -0.07
RPP40-206ENST00000483546 HSPA4LO95757 839 aa14.59□□□□□ -0.07
RPP40-206ENST00000483546 GBAP04062 536 aa14.59□□□□□ -0.07
RPP40-206ENST00000483546 UQCRHP07919 91 aa14.59□□□□□ -0.07
RPP40-206ENST00000483546 ITGAMP11215 1152 aa14.59□□□□□ -0.07
RPP40-206ENST00000483546 DRD2P14416 443 aa14.59□□□□□ -0.07
RPP40-206ENST00000483546 CHN1P15882 459 aa14.59□□□□□ -0.07
RPP40-206ENST00000483546 SERPINB3P29508 390 aa14.59□□□□□ -0.07
RPP40-206ENST00000483546 STT3AP46977 705 aa14.59□□□□□ -0.07
RPP40-206ENST00000483546 FOLH1Q04609 750 aa14.59□□□□□ -0.07
RPP40-206ENST00000483546 CHI3L2Q15782 390 aa14.59□□□□□ -0.07
RPP40-206ENST00000483546 SPDYAQ5MJ70 313 aa14.59□□□□□ -0.07
RPP40-206ENST00000483546 SH2D4BQ5SQS7 431 aa14.59□□□□□ -0.07
RPP40-206ENST00000483546 TRIM42Q8IWZ5 723 aa14.59□□□□□ -0.07
RPP40-206ENST00000483546 ST13P4Q8IZP2 240 aaPredicted RBP14.59□□□□□ -0.07
RPP40-206ENST00000483546 SLC5A8Q8N695 610 aa14.59□□□□□ -0.07
RPP40-206ENST00000483546 DNAJB14Q8TBM8 379 aa14.59□□□□□ -0.07
RPP40-206ENST00000483546 RAB3IL1Q8TBN0 382 aa14.59□□□□□ -0.07
RPP40-206ENST00000483546 VMP1Q96GC9 406 aa14.59□□□□□ -0.07
RPP40-206ENST00000483546 APIPQ96GX9 242 aa14.59□□□□□ -0.07
RPP40-206ENST00000483546 RBM18Q96H35 190 aaKnown RBP14.59□□□□□ -0.07
RPP40-206ENST00000483546 ART5Q96L15 291 aa14.59□□□□□ -0.07
RPP40-206ENST00000483546 ATP6V1G3Q96LB4 118 aa14.59□□□□□ -0.07
RPP40-206ENST00000483546 ZNF354BQ96LW1 612 aa14.59□□□□□ -0.07
RPP40-206ENST00000483546 DGAT2Q96PD7 388 aa14.59□□□□□ -0.07
RPP40-206ENST00000483546 SH3GL2Q99962 352 aa14.59□□□□□ -0.07
RPP40-206ENST00000483546 TEX10Q9NXF1 929 aaPredicted RBP14.59□□□□□ -0.07
RPP40-206ENST00000483546 PSME2Q9UL46 239 aa14.59□□□□□ -0.07
RPP40-206ENST00000483546 PCDHA9Q9Y5H5 950 aa14.59□□□□□ -0.07
RPP40-206ENST00000483546 HEMK1Q9Y5R4 338 aaPredicted RBP14.59□□□□□ -0.07
RPP40-206ENST00000483546 CNTRLQ7Z7A1 2325 aa14.59□□□□□ -0.07
RPP40-206ENST00000483546 CROCCQ5TZA2 2017 aa14.58□□□□□ -0.08
RPP40-206ENST00000483546 GNG14A0A1W2PPG7 69 aa14.58□□□□□ -0.08
RPP40-206ENST00000483546 WDR91A4D1P6 747 aa14.58□□□□□ -0.08
RPP40-206ENST00000483546 ALOX15P16050 662 aaPredicted RBP14.58□□□□□ -0.08
RPP40-206ENST00000483546 NR1D1P20393 614 aa14.58□□□□□ -0.08
RPP40-206ENST00000483546 PIK3R1P27986 724 aa14.58□□□□□ -0.08
RPP40-206ENST00000483546 CLCN2P51788 898 aa14.58□□□□□ -0.08
RPP40-206ENST00000483546 ABCE1P61221 599 aaKnown RBP14.58□□□□□ -0.08
RPP40-206ENST00000483546 HEPACAMQ14CZ8 416 aa14.58□□□□□ -0.08
RPP40-206ENST00000483546 UGT3A2Q3SY77 523 aa14.58□□□□□ -0.08
RPP40-206ENST00000483546 ABHD17BQ5VST6 288 aa14.58□□□□□ -0.08
RPP40-206ENST00000483546 SLC48A1Q6P1K1 146 aa14.58□□□□□ -0.08
RPP40-206ENST00000483546 SAMD14Q8IZD0 417 aaPredicted RBP14.58□□□□□ -0.08
RPP40-206ENST00000483546 ANKRD42Q8N9B4 389 aa14.58□□□□□ -0.08
RPP40-206ENST00000483546 OR4K14Q8NGD5 310 aa14.58□□□□□ -0.08
RPP40-206ENST00000483546 TWIST2Q8WVJ9 160 aa14.58□□□□□ -0.08
RPP40-206ENST00000483546 PNPLA2Q96AD5 504 aa14.58□□□□□ -0.08
RPP40-206ENST00000483546 TM4SF18Q96CE8 201 aa14.58□□□□□ -0.08
RPP40-206ENST00000483546 ACBD3Q9H3P7 528 aa14.58□□□□□ -0.08
RPP40-206ENST00000483546 RYDENQ9NUL5 291 aaKnown RBP14.58□□□□□ -0.08
RPP40-206ENST00000483546 C1orf109Q9NX04 203 aa14.58□□□□□ -0.08
RPP40-206ENST00000483546 ABI3Q9P2A4 366 aa14.58□□□□□ -0.08
RPP40-206ENST00000483546 PTGFRNQ9P2B2 879 aa14.58□□□□□ -0.08
RPP40-206ENST00000483546 TMED5Q9Y3A6 229 aa14.58□□□□□ -0.08
RPP40-206ENST00000483546 CCL27Q9Y4X3 112 aa14.58□□□□□ -0.08
RPP40-206ENST00000483546 KALRNO60229 2985 aa14.57□□□□□ -0.08
RPP40-206ENST00000483546 BOD1L1Q8NFC6 3051 aa14.57□□□□□ -0.08
RPP40-206ENST00000483546 DYTNA2CJ06 578 aa14.57□□□□□ -0.08
RPP40-206ENST00000483546 A8MUA0 341 aa14.57□□□□□ -0.08
RPP40-206ENST00000483546 HMGB1P1B2RPK0 211 aaPredicted RBP14.57□□□□□ -0.08
RPP40-206ENST00000483546 PRB1P04280 392 aa14.57□□□□□ -0.08
RPP40-206ENST00000483546 CELA2AP08217 269 aa14.57□□□□□ -0.08
RPP40-206ENST00000483546 ANXA4P09525 319 aaPredicted RBP14.57□□□□□ -0.08
RPP40-206ENST00000483546 SLC35E2P0CK97 266 aa14.57□□□□□ -0.08
RPP40-206ENST00000483546 TNNI3P19429 210 aa14.57□□□□□ -0.08
RPP40-206ENST00000483546 GPR143P51810 404 aa14.57□□□□□ -0.08
RPP40-206ENST00000483546 WDR4P57081 412 aaKnown RBP14.57□□□□□ -0.08
RPP40-206ENST00000483546 RAE1P78406 368 aaKnown RBP14.57□□□□□ -0.08
RPP40-206ENST00000483546 ZNF763Q0D2J5 394 aa14.57□□□□□ -0.08
RPP40-206ENST00000483546 STX3Q13277 289 aa14.57□□□□□ -0.08
RPP40-206ENST00000483546 MEP1AQ16819 746 aa14.57□□□□□ -0.08
RPP40-206ENST00000483546 SPRED3Q2MJR0 410 aa14.57□□□□□ -0.08
RPP40-206ENST00000483546 SCIMPQ6UWF3 145 aa14.57□□□□□ -0.08
RPP40-206ENST00000483546 ARMC10Q8N2F6 343 aa14.57□□□□□ -0.08
RPP40-206ENST00000483546 SIRT6Q8N6T7 355 aa14.57□□□□□ -0.08
RPP40-206ENST00000483546 APCDD1LQ8NCL9 501 aa14.57□□□□□ -0.08
RPP40-206ENST00000483546 OR8K3Q8NH51 312 aa14.57□□□□□ -0.08
RPP40-206ENST00000483546 PTPMT1Q8WUK0 201 aaPredicted RBP14.57□□□□□ -0.08
RPP40-206ENST00000483546 PAIP2Q9BPZ3 127 aaKnown RBP14.57□□□□□ -0.08
RPP40-206ENST00000483546 ILKAPQ9H0C8 392 aaPredicted RBP14.57□□□□□ -0.08
RPP40-206ENST00000483546 LRTM1Q9HBL6 345 aa14.57□□□□□ -0.08
RPP40-206ENST00000483546 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms