RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 PRAMEF25A6NGN4 478 aa13.63□□□□□ -0.23
COL9A2-207ENST00000482722 TPST2O60704 377 aa13.63□□□□□ -0.23
COL9A2-207ENST00000482722 TSPAN9O75954 239 aa13.63□□□□□ -0.23
COL9A2-207ENST00000482722 PRPS1L1P21108 318 aa13.63□□□□□ -0.23
COL9A2-207ENST00000482722 ENPP1P22413 925 aa13.63□□□□□ -0.23
COL9A2-207ENST00000482722 CD70P32970 193 aa13.63□□□□□ -0.23
COL9A2-207ENST00000482722 RRAS2P62070 204 aaPredicted RBP13.63□□□□□ -0.23
COL9A2-207ENST00000482722 ABRQ12979 859 aa13.63□□□□□ -0.23
COL9A2-207ENST00000482722 MAB21L1Q13394 359 aa13.63□□□□□ -0.23
COL9A2-207ENST00000482722 WSCD2Q2TBF2 565 aa13.63□□□□□ -0.23
COL9A2-207ENST00000482722 PAQR6Q6TCH4 344 aa13.63□□□□□ -0.23
COL9A2-207ENST00000482722 CRTC1Q6UUV9 634 aa13.63□□□□□ -0.23
COL9A2-207ENST00000482722 ZNF852Q6ZMS4 543 aa13.63□□□□□ -0.23
COL9A2-207ENST00000482722 MACC1Q6ZN28 852 aa13.63□□□□□ -0.23
COL9A2-207ENST00000482722 MSANTD1Q6ZTZ1 278 aa13.63□□□□□ -0.23
COL9A2-207ENST00000482722 TMEM203Q969S6 136 aa13.63□□□□□ -0.23
COL9A2-207ENST00000482722 TCF25Q9BQ70 676 aa13.63□□□□□ -0.23
COL9A2-207ENST00000482722 POLR2J2Q9GZM3 115 aaKnown RBP13.63□□□□□ -0.23
COL9A2-207ENST00000482722 NDUFB11Q9NX14 153 aa13.63□□□□□ -0.23
COL9A2-207ENST00000482722 KCTD5Q9NXV2 234 aa13.63□□□□□ -0.23
COL9A2-207ENST00000482722 HIDE1A8MVS5 230 aa13.62□□□□□ -0.23
COL9A2-207ENST00000482722 I3L521 148 aa13.62□□□□□ -0.23
COL9A2-207ENST00000482722 CCL16O15467 120 aa13.62□□□□□ -0.23
COL9A2-207ENST00000482722 NSG1P42857 185 aa13.62□□□□□ -0.23
COL9A2-207ENST00000482722 SELENOWP63302 87 aa13.62□□□□□ -0.23
COL9A2-207ENST00000482722 COX20Q5RI15 118 aa13.62□□□□□ -0.23
COL9A2-207ENST00000482722 CCNJQ5T5M9 372 aa13.62□□□□□ -0.23
COL9A2-207ENST00000482722 FRG2Q64ET8 278 aa13.62□□□□□ -0.23
COL9A2-207ENST00000482722 SERPINA13PQ6UXR4 307 aa13.62□□□□□ -0.23
COL9A2-207ENST00000482722 TRIM69Q86WT6 500 aa13.62□□□□□ -0.23
COL9A2-207ENST00000482722 DTX3Q8N9I9 347 aa13.62□□□□□ -0.23
COL9A2-207ENST00000482722 OR9Q1Q8NGQ5 310 aa13.62□□□□□ -0.23
COL9A2-207ENST00000482722 ALG14Q96F25 216 aa13.62□□□□□ -0.23
COL9A2-207ENST00000482722 QRFPRQ96P65 431 aa13.62□□□□□ -0.23
COL9A2-207ENST00000482722 FRG2BQ96QU4 278 aa13.62□□□□□ -0.23
COL9A2-207ENST00000482722 DCLRE1CQ96SD1 692 aaKnown RBP13.62□□□□□ -0.23
COL9A2-207ENST00000482722 TMEM121BQ9BXQ6 578 aaPredicted RBP13.62□□□□□ -0.23
COL9A2-207ENST00000482722 CHST8Q9H2A9 424 aa13.62□□□□□ -0.23
COL9A2-207ENST00000482722 RETREG1Q9H6L5 497 aa13.62□□□□□ -0.23
COL9A2-207ENST00000482722 RBFOX1Q9NWB1 397 aaKnown RBP13.62□□□□□ -0.23
COL9A2-207ENST00000482722 TXNL4BQ9NX01 149 aaKnown RBP13.62□□□□□ -0.23
COL9A2-207ENST00000482722 SPG21Q9NZD8 308 aa13.62□□□□□ -0.23
COL9A2-207ENST00000482722 BACE2Q9Y5Z0 518 aa13.62□□□□□ -0.23
COL9A2-207ENST00000482722 HCFC2Q9Y5Z7 792 aa13.62□□□□□ -0.23
COL9A2-207ENST00000482722 COL4A6Q14031 1691 aa13.62□□□□□ -0.23
COL9A2-207ENST00000482722 NOTCH4Q99466 2003 aa13.62□□□□□ -0.23
COL9A2-207ENST00000482722 TRIM77I1YAP6 450 aa13.62□□□□□ -0.23
COL9A2-207ENST00000482722 SLC22A5O76082 557 aa13.62□□□□□ -0.23
COL9A2-207ENST00000482722 ETFAP13804 333 aa13.62□□□□□ -0.23
COL9A2-207ENST00000482722 SERPINA4P29622 427 aa13.62□□□□□ -0.23
COL9A2-207ENST00000482722 ALDH9A1P49189 494 aa13.62□□□□□ -0.23
COL9A2-207ENST00000482722 RAB25P57735 213 aa13.62□□□□□ -0.23
COL9A2-207ENST00000482722 B4GALNT1Q00973 533 aa13.62□□□□□ -0.23
COL9A2-207ENST00000482722 CHIT1Q13231 466 aa13.62□□□□□ -0.23
COL9A2-207ENST00000482722 DDI2Q5TDH0 399 aa13.62□□□□□ -0.23
COL9A2-207ENST00000482722 C22orf42Q6IC83 251 aa13.62□□□□□ -0.23
COL9A2-207ENST00000482722 FAM9CQ8IZT9 166 aa13.62□□□□□ -0.23
COL9A2-207ENST00000482722 C19orf18Q8NEA5 215 aa13.62□□□□□ -0.23
COL9A2-207ENST00000482722 GPR156Q8NFN8 814 aa13.62□□□□□ -0.23
COL9A2-207ENST00000482722 UBTD2Q8WUN7 234 aa13.62□□□□□ -0.23
COL9A2-207ENST00000482722 FOXJ1Q92949 421 aa13.62□□□□□ -0.23
COL9A2-207ENST00000482722 SPATA9Q9BWV2 254 aa13.62□□□□□ -0.23
COL9A2-207ENST00000482722 RACGAP1Q9H0H5 632 aa13.62□□□□□ -0.23
COL9A2-207ENST00000482722 ZDHHC6Q9H6R6 413 aa13.62□□□□□ -0.23
COL9A2-207ENST00000482722 C11orf16Q9NQ32 467 aa13.62□□□□□ -0.23
COL9A2-207ENST00000482722 MRPL17Q9NRX2 175 aaKnown RBP13.62□□□□□ -0.23
COL9A2-207ENST00000482722 DNAJC27Q9NZQ0 273 aa13.62□□□□□ -0.23
COL9A2-207ENST00000482722 SH3BP4Q9P0V3 963 aa13.62□□□□□ -0.23
COL9A2-207ENST00000482722 FTSJ1Q9UET6 329 aa13.62□□□□□ -0.23
COL9A2-207ENST00000482722 PCDHB11Q9Y5F2 797 aa13.62□□□□□ -0.23
COL9A2-207ENST00000482722 FAM240BA0A1B0GVZ2 78 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 CIB4A0PJX0 185 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 LINC00862A6NCI5 91 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 FGF18O76093 207 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 IGSF6O95976 241 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 SLC2A2P11168 524 aaPredicted RBP13.61□□□□□ -0.23
COL9A2-207ENST00000482722 ARSBP15848 533 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 TNNI3P19429 210 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 MAPK1P28482 360 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 LMAN2Q12907 356 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 MRPL28Q13084 256 aaKnown RBP13.61□□□□□ -0.23
COL9A2-207ENST00000482722 HKDC1Q2TB90 917 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 LEXMQ3ZCV2 418 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 TRIQKQ629K1 86 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 KLHL17Q6TDP4 642 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 BCDIN3DQ7Z5W3 292 aaKnown RBP13.61□□□□□ -0.23
COL9A2-207ENST00000482722 PHC2Q8IXK0 858 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 OR8H3Q8N146 312 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 OR4K1Q8NGD4 311 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 DNAJA4Q8WW22 397 aaPredicted RBP13.61□□□□□ -0.23
COL9A2-207ENST00000482722 OVCA2Q8WZ82 227 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 ZNF689Q96CS4 500 aaPredicted RBP13.61□□□□□ -0.23
COL9A2-207ENST00000482722 TCEAL4Q96EI5 215 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 TMEM80Q96HE8 168 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 P2RY13Q9BPV8 354 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 DUSP26Q9BV47 211 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 IL21Q9HBE4 155 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 KCNE1BA0A087WTH5 132 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 TRBV5-4A0A0C4DH59 114 aa13.61□□□□□ -0.23
COL9A2-207ENST00000482722 ZAR1LA6NP61 321 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms