RNA–Protein interactions for RNA: ENST00000481020.5

NR1H3-220, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5

Gene NR1H3, Length 1,704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-220ENST00000481020 ACOT12Q8WYK0 555 aa13.65□□□□□ -0.22
NR1H3-220ENST00000481020 RNF31Q96EP0 1072 aa13.65□□□□□ -0.22
NR1H3-220ENST00000481020 KCNJ15Q99712 375 aa13.65□□□□□ -0.22
NR1H3-220ENST00000481020 TMEM175Q9BSA9 504 aa13.65□□□□□ -0.22
NR1H3-220ENST00000481020 EFCAB11Q9BUY7 163 aa13.65□□□□□ -0.22
NR1H3-220ENST00000481020 CPEB1Q9BZB8 566 aaKnown RBP13.65□□□□□ -0.22
NR1H3-220ENST00000481020 GPR62Q9BZJ7 368 aa13.65□□□□□ -0.22
NR1H3-220ENST00000481020 BRD9Q9H8M2 597 aa13.65□□□□□ -0.22
NR1H3-220ENST00000481020 EXOSC1Q9Y3B2 195 aaKnown RBP13.65□□□□□ -0.22
NR1H3-220ENST00000481020 KCNE2Q9Y6J6 123 aa13.65□□□□□ -0.22
NR1H3-220ENST00000481020 TRDV1A0A1B0GX56 115 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 NPIPB15A6NHN6 443 aaPredicted RBP13.64□□□□□ -0.23
NR1H3-220ENST00000481020 E7EQ34 232 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 SLC19A2O60779 497 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 TBX19O60806 448 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 C6orf47O95873 294 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 H1F0P07305 194 aaKnown RBP13.64□□□□□ -0.23
NR1H3-220ENST00000481020 CCNYL3P0C7X3 344 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 FAM157BP0CG42 384 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 POU2F1P14859 743 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 ZNF8P17098 575 aaPredicted RBP13.64□□□□□ -0.23
NR1H3-220ENST00000481020 TNFRSF1BP20333 461 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 IFNA8P32881 189 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 DCDC1P59894 354 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 SNRPD1P62314 119 aaKnown RBP13.64□□□□□ -0.23
NR1H3-220ENST00000481020 HSD17B12Q53GQ0 312 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 WDR45BQ5MNZ6 344 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 FUT10Q6P4F1 479 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 AGTRAPQ6RW13 159 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 RFPL4BQ6ZWI9 263 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 PRICKLE2Q7Z3G6 844 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 RTN4RL1Q86UN2 441 aaPredicted RBP13.64□□□□□ -0.23
NR1H3-220ENST00000481020 HUS1BQ8NHY5 278 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 UFD1Q92890 307 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 SNAPC3Q92966 411 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 IL4I1Q96RQ9 567 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 TM6SF2Q9BZW4 377 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 POLR2J3Q9H1A7 115 aaKnown RBP13.64□□□□□ -0.23
NR1H3-220ENST00000481020 TRIM45Q9H8W5 580 aaPredicted RBP13.64□□□□□ -0.23
NR1H3-220ENST00000481020 ZSCAN32Q9NX65 697 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 TAS2R7Q9NYW3 318 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 NFKBIL1Q9UBC1 381 aaPredicted RBP13.64□□□□□ -0.23
NR1H3-220ENST00000481020 CLEC2DQ9UHP7 191 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 NUP50Q9UKX7 468 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 EXO1Q9UQ84 846 aaKnown RBP13.64□□□□□ -0.23
NR1H3-220ENST00000481020 PCDHB7Q9Y5E2 793 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 J3KTA2 159 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 LYRM1O43325 122 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 PRKYO43930 277 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 CPNE3O75131 537 aaKnown RBP13.64□□□□□ -0.23
NR1H3-220ENST00000481020 CYBAP13498 195 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 GSTM3P21266 225 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 ELAVL4P26378 380 aaKnown RBP13.64□□□□□ -0.23
NR1H3-220ENST00000481020 POU1F1P28069 291 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 ACSM1Q08AH1 577 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 MRPL28Q13084 256 aaKnown RBP13.64□□□□□ -0.23
NR1H3-220ENST00000481020 SLC5A12Q1EHB4 618 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 SMUG1Q53HV7 270 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 LIPKQ5VXJ0 399 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 FAM71E1Q6IPT2 247 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 GHDCQ8N2G8 530 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 CAMKK1Q8N5S9 505 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 NR4A3Q92570 626 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 UBE2E3Q969T4 207 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 TRMT61AQ96FX7 289 aaKnown RBP13.64□□□□□ -0.23
NR1H3-220ENST00000481020 FUZQ9BT04 418 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 TMEM43Q9BTV4 400 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 KATNB1Q9BVA0 655 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 NLNQ9BYT8 704 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 PRRG3Q9BZD7 231 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 ATG10Q9H0Y0 220 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 ABCG8Q9H221 673 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 TRIM39Q9HCM9 518 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 STOX2Q9P2F5 926 aaPredicted RBP13.64□□□□□ -0.23
NR1H3-220ENST00000481020 KCNN3Q9UGI6 736 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 POLHQ9Y253 713 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 ITM2BQ9Y287 266 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 BACE2Q9Y5Z0 518 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 ALG5Q9Y673 324 aa13.64□□□□□ -0.23
NR1H3-220ENST00000481020 A0A0G2JMP0 313 aa13.63□□□□□ -0.23
NR1H3-220ENST00000481020 FAM240BA0A1B0GVZ2 78 aa13.63□□□□□ -0.23
NR1H3-220ENST00000481020 C5orf58C9J3I9 102 aa13.63□□□□□ -0.23
NR1H3-220ENST00000481020 M0R129 80 aa13.63□□□□□ -0.23
NR1H3-220ENST00000481020 HMGA1P17096 107 aaKnown RBP13.63□□□□□ -0.23
NR1H3-220ENST00000481020 CST5P28325 142 aaPredicted RBP13.63□□□□□ -0.23
NR1H3-220ENST00000481020 SPINT3P49223 89 aa13.63□□□□□ -0.23
NR1H3-220ENST00000481020 ZNF157P51786 506 aaPredicted RBP13.63□□□□□ -0.23
NR1H3-220ENST00000481020 ZXDBP98169 803 aa13.63□□□□□ -0.23
NR1H3-220ENST00000481020 PTSQ03393 145 aa13.63□□□□□ -0.23
NR1H3-220ENST00000481020 DDX39BQ13838 428 aaKnown RBP13.63□□□□□ -0.23
NR1H3-220ENST00000481020 DSG2Q14126 1118 aa13.63□□□□□ -0.23
NR1H3-220ENST00000481020 ZNF385BQ569K4 471 aa13.63□□□□□ -0.23
NR1H3-220ENST00000481020 RSPO2Q6UXX9 243 aaPredicted RBP13.63□□□□□ -0.23
NR1H3-220ENST00000481020 CDH24Q86UP0 819 aa13.63□□□□□ -0.23
NR1H3-220ENST00000481020 Q8N402 240 aa13.63□□□□□ -0.23
NR1H3-220ENST00000481020 OR52I1Q8NGK6 324 aa13.63□□□□□ -0.23
NR1H3-220ENST00000481020 AKAP1Q92667 903 aaKnown RBP eCLIP13.63□□□□□ -0.23
NR1H3-220ENST00000481020 ZNF764Q96H86 408 aaPredicted RBP13.63□□□□□ -0.23
NR1H3-220ENST00000481020 SLC6A18Q96N87 628 aa13.63□□□□□ -0.23
NR1H3-220ENST00000481020 ZIC5Q96T25 663 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms