RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 ERVK-11Q9UQG0 969 aa16.56■□□□□ 0.24
UPF3A-206ENST00000480362 MYO1GB0I1T2 1018 aa16.55■□□□□ 0.24
UPF3A-206ENST00000480362 GFRA3O60609 400 aa16.55■□□□□ 0.24
UPF3A-206ENST00000480362 ANP32DO95626 131 aa16.55■□□□□ 0.24
UPF3A-206ENST00000480362 ABCB1P08183 1280 aaPredicted RBP16.55■□□□□ 0.24
UPF3A-206ENST00000480362 CEACAM1P13688 526 aa16.55■□□□□ 0.24
UPF3A-206ENST00000480362 CSNK2A2P19784 350 aaPredicted RBP16.55■□□□□ 0.24
UPF3A-206ENST00000480362 FEN1P39748 380 aaKnown RBP16.55■□□□□ 0.24
UPF3A-206ENST00000480362 ETV5P41161 510 aa16.55■□□□□ 0.24
UPF3A-206ENST00000480362 XCR1P46094 333 aa16.55■□□□□ 0.24
UPF3A-206ENST00000480362 MANFP55145 182 aaKnown RBP16.55■□□□□ 0.24
UPF3A-206ENST00000480362 GTDC1Q4AE62 458 aa16.55■□□□□ 0.24
UPF3A-206ENST00000480362 LRIF1Q5T3J3 769 aa16.55■□□□□ 0.24
UPF3A-206ENST00000480362 ARHGAP40Q5TG30 622 aa16.55■□□□□ 0.24
UPF3A-206ENST00000480362 DNAJC14Q6Y2X3 702 aaPredicted RBP16.55■□□□□ 0.24
UPF3A-206ENST00000480362 ZNF621Q6ZSS3 439 aa16.55■□□□□ 0.24
UPF3A-206ENST00000480362 OR5P2Q8WZ92 322 aa16.55■□□□□ 0.24
UPF3A-206ENST00000480362 TBC1D20Q96BZ9 403 aa16.55■□□□□ 0.24
UPF3A-206ENST00000480362 CNRIP1Q96F85 164 aaPredicted RBP16.55■□□□□ 0.24
UPF3A-206ENST00000480362 ZBED6CLQ96FA7 236 aaPredicted RBP16.55■□□□□ 0.24
UPF3A-206ENST00000480362 ZNF681Q96N22 645 aa16.55■□□□□ 0.24
UPF3A-206ENST00000480362 CGREF1Q99674 301 aa16.55■□□□□ 0.24
UPF3A-206ENST00000480362 THTPAQ9BU02 230 aa16.55■□□□□ 0.24
UPF3A-206ENST00000480362 GLIPR2Q9H4G4 154 aa16.55■□□□□ 0.24
UPF3A-206ENST00000480362 SLC6A13Q9NSD5 602 aa16.55■□□□□ 0.24
UPF3A-206ENST00000480362 ACSS1Q9NUB1 689 aaPredicted RBP16.55■□□□□ 0.24
UPF3A-206ENST00000480362 VAPAQ9P0L0 249 aa16.55■□□□□ 0.24
UPF3A-206ENST00000480362 TRPC4Q9UBN4 977 aa16.55■□□□□ 0.24
UPF3A-206ENST00000480362 ENTPD4Q9Y227 616 aa16.55■□□□□ 0.24
UPF3A-206ENST00000480362 MRPS33Q9Y291 106 aaKnown RBP16.55■□□□□ 0.24
UPF3A-206ENST00000480362 MAP4K5Q9Y4K4 846 aa16.55■□□□□ 0.24
UPF3A-206ENST00000480362 PCDHB14Q9Y5E9 798 aa16.55■□□□□ 0.24
UPF3A-206ENST00000480362 ZNF780BQ9Y6R6 833 aa16.55■□□□□ 0.24
UPF3A-206ENST00000480362 PCNX2A6NKB5 2137 aa16.55■□□□□ 0.24
UPF3A-206ENST00000480362 CROCCQ5TZA2 2017 aa16.54■□□□□ 0.24
UPF3A-206ENST00000480362 CCDC187A0A096LP49 1063 aa16.54■□□□□ 0.24
UPF3A-206ENST00000480362 A0A1W2PS29 197 aa16.54■□□□□ 0.24
UPF3A-206ENST00000480362 BLACEA4D250 179 aa16.54■□□□□ 0.24
UPF3A-206ENST00000480362 B4GALT2O60909 372 aa16.54■□□□□ 0.24
UPF3A-206ENST00000480362 LDB3O75112 727 aa16.54■□□□□ 0.24
UPF3A-206ENST00000480362 GPR75O95800 540 aa16.54■□□□□ 0.24
UPF3A-206ENST00000480362 HOXB9P17482 250 aaPredicted RBP16.54■□□□□ 0.24
UPF3A-206ENST00000480362 PTPN6P29350 595 aa16.54■□□□□ 0.24
UPF3A-206ENST00000480362 NTSP30990 170 aa16.54■□□□□ 0.24
UPF3A-206ENST00000480362 PGM1P36871 562 aa16.54■□□□□ 0.24
UPF3A-206ENST00000480362 XKP51811 444 aa16.54■□□□□ 0.24
UPF3A-206ENST00000480362 MAPK10P53779 464 aa16.54■□□□□ 0.24
UPF3A-206ENST00000480362 KCNJ2P63252 427 aa16.54■□□□□ 0.24
UPF3A-206ENST00000480362 HBA1P69905 142 aa16.54■□□□□ 0.24
UPF3A-206ENST00000480362 RUNDC3AQ59EK9 446 aa16.54■□□□□ 0.24
UPF3A-206ENST00000480362 NANOGP8Q6NSW7 305 aa16.54■□□□□ 0.24
UPF3A-206ENST00000480362 CEACAM20Q6UY09 585 aa16.54■□□□□ 0.24
UPF3A-206ENST00000480362 ZNF551Q7Z340 670 aaPredicted RBP16.54■□□□□ 0.24
UPF3A-206ENST00000480362 MSRB3Q8IXL7 192 aa16.54■□□□□ 0.24
UPF3A-206ENST00000480362 ZNF595Q8IYB9 648 aa16.54■□□□□ 0.24
UPF3A-206ENST00000480362 CCDC116Q8IYX3 515 aa16.54■□□□□ 0.24
UPF3A-206ENST00000480362 GOT1L1Q8NHS2 421 aaPredicted RBP16.54■□□□□ 0.24
UPF3A-206ENST00000480362 PMEPA1Q969W9 287 aa16.54■□□□□ 0.24
UPF3A-206ENST00000480362 ANKRD9Q96BM1 317 aaPredicted RBP16.54■□□□□ 0.24
UPF3A-206ENST00000480362 GBP5Q96PP8 586 aa16.54■□□□□ 0.24
UPF3A-206ENST00000480362 CDRT15Q96T59 188 aa16.54■□□□□ 0.24
UPF3A-206ENST00000480362 NANOGQ9H9S0 305 aa16.54■□□□□ 0.24
UPF3A-206ENST00000480362 TAS2R9Q9NYW1 312 aa16.54■□□□□ 0.24
UPF3A-206ENST00000480362 SLC25A37Q9NYZ2 338 aa16.54■□□□□ 0.24
UPF3A-206ENST00000480362 FRYLO94915 3013 aa16.53■□□□□ 0.24
UPF3A-206ENST00000480362 TRBV5-3A0A0A0MS03 114 aa16.53■□□□□ 0.24
UPF3A-206ENST00000480362 CLDN4O14493 209 aa16.53■□□□□ 0.24
UPF3A-206ENST00000480362 SLC30A4O14863 429 aa16.53■□□□□ 0.24
UPF3A-206ENST00000480362 NVLO15381 856 aaKnown RBP16.53■□□□□ 0.24
UPF3A-206ENST00000480362 FGF17O60258 216 aa16.53■□□□□ 0.24
UPF3A-206ENST00000480362 CTNSO60931 367 aa16.53■□□□□ 0.24
UPF3A-206ENST00000480362 CPNE3O75131 537 aaKnown RBP16.53■□□□□ 0.24
UPF3A-206ENST00000480362 JRKO75564 520 aa16.53■□□□□ 0.24
UPF3A-206ENST00000480362 FHP07954 510 aa16.53■□□□□ 0.24
UPF3A-206ENST00000480362 JMJD7P0C870 316 aa16.53■□□□□ 0.24
UPF3A-206ENST00000480362 ZCCHC18P0CG32 403 aa16.53■□□□□ 0.24
UPF3A-206ENST00000480362 ZNF28P17035 718 aa16.53■□□□□ 0.24
UPF3A-206ENST00000480362 SLC6A2P23975 617 aa16.53■□□□□ 0.24
UPF3A-206ENST00000480362 NOVA1P51513 510 aaKnown RBP16.53■□□□□ 0.24
UPF3A-206ENST00000480362 NCBP2P52298 156 aaKnown RBP eCLIP16.53■□□□□ 0.244e-7■■■■□ 22.1
UPF3A-206ENST00000480362 RAB15P59190 212 aa16.53■□□□□ 0.24
UPF3A-206ENST00000480362 DCDP81605 110 aaKnown RBP16.53■□□□□ 0.24
UPF3A-206ENST00000480362 ID2Q02363 134 aa16.53■□□□□ 0.24
UPF3A-206ENST00000480362 FOLH1Q04609 750 aa16.53■□□□□ 0.24
UPF3A-206ENST00000480362 DUSP2Q05923 314 aa16.53■□□□□ 0.24
UPF3A-206ENST00000480362 ABHD18Q0P651 414 aa16.53■□□□□ 0.24
UPF3A-206ENST00000480362 MLC1Q15049 377 aa16.53■□□□□ 0.24
UPF3A-206ENST00000480362 CEBPEQ15744 281 aa16.53■□□□□ 0.24
UPF3A-206ENST00000480362 DCAF12Q5T6F0 453 aa16.53■□□□□ 0.24
UPF3A-206ENST00000480362 BNC2Q6ZN30 1099 aaPredicted RBP16.53■□□□□ 0.24
UPF3A-206ENST00000480362 SAMD14Q8IZD0 417 aaPredicted RBP16.53■□□□□ 0.24
UPF3A-206ENST00000480362 ZFP28Q8NHY6 868 aa16.53■□□□□ 0.24
UPF3A-206ENST00000480362 MCUR1Q96AQ8 359 aa16.53■□□□□ 0.24
UPF3A-206ENST00000480362 AMDHD1Q96NU7 426 aa16.53■□□□□ 0.24
UPF3A-206ENST00000480362 ANKRD27Q96NW4 1050 aa16.53■□□□□ 0.24
UPF3A-206ENST00000480362 PRTFDC1Q9NRG1 225 aa16.53■□□□□ 0.24
UPF3A-206ENST00000480362 SLC22A11Q9NSA0 550 aa16.53■□□□□ 0.24
UPF3A-206ENST00000480362 ADA2Q9NZK5 511 aa16.53■□□□□ 0.24
UPF3A-206ENST00000480362 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.53■□□□□ 0.24
UPF3A-206ENST00000480362 PISDQ9UG56 409 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms