RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 ARHGEF39Q8N4T4 335 aa10.41□□□□□ -0.74
VTI1A-204ENST00000480057 OR6C4Q8NGE1 309 aa10.41□□□□□ -0.74
VTI1A-204ENST00000480057 OR56A1Q8NGH5 318 aa10.41□□□□□ -0.74
VTI1A-204ENST00000480057 PNPT1Q8TCS8 783 aaKnown RBP10.41□□□□□ -0.74
VTI1A-204ENST00000480057 MIPOL1Q8TD10 442 aa10.41□□□□□ -0.74
VTI1A-204ENST00000480057 ADAMTS18Q8TE60 1221 aa10.41□□□□□ -0.74
VTI1A-204ENST00000480057 KLHL6Q8WZ60 621 aa10.41□□□□□ -0.74
VTI1A-204ENST00000480057 ZC3H10Q96K80 434 aaKnown RBP10.41□□□□□ -0.74
VTI1A-204ENST00000480057 C10orf90Q96M02 699 aa10.41□□□□□ -0.74
VTI1A-204ENST00000480057 ZNF681Q96N22 645 aa10.41□□□□□ -0.74
VTI1A-204ENST00000480057 DUSP23Q9BVJ7 150 aa10.41□□□□□ -0.74
VTI1A-204ENST00000480057 OSBPL11Q9BXB4 747 aa10.41□□□□□ -0.74
VTI1A-204ENST00000480057 OSBPL10Q9BXB5 764 aa10.41□□□□□ -0.74
VTI1A-204ENST00000480057 SEMA6AQ9H2E6 1030 aa10.41□□□□□ -0.74
VTI1A-204ENST00000480057 PLSCR2Q9NRY7 297 aa10.41□□□□□ -0.74
VTI1A-204ENST00000480057 PILRBQ9UKJ0 227 aa10.41□□□□□ -0.74
VTI1A-204ENST00000480057 DAPP1Q9UN19 280 aa10.41□□□□□ -0.74
VTI1A-204ENST00000480057 PLCL2Q9UPR0 1127 aa10.41□□□□□ -0.74
VTI1A-204ENST00000480057 TDRD6O60522 2096 aaKnown RBP10.4□□□□□ -0.74
VTI1A-204ENST00000480057 THADAQ6YHU6 1953 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 SLC9B1P1A6NJY1 282 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 PGRMC2O15173 223 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 ACOX3O15254 700 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 TPST1O60507 370 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 PDE9AO76083 593 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 HPRP00739 348 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 PDGFBP01127 241 aaPredicted RBP10.4□□□□□ -0.74
VTI1A-204ENST00000480057 C1QCP02747 245 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 C9P02748 559 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 STATHP02808 62 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 FHP07954 510 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 NUDT7P0C024 238 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 GIMD1P0DJR0 217 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 ETFAP13804 333 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 GPC1P35052 558 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 CDK9P50750 372 aaKnown RBP10.4□□□□□ -0.74
VTI1A-204ENST00000480057 PPP1CAP62136 330 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 PRR5P85299 388 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 CDK6Q00534 326 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 HSPB3Q12988 150 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 MED21Q13503 144 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 RUNX2Q13950 521 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 GNA13Q14344 377 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 SHBQ15464 509 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 INAVAQ3KP66 663 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 PLK5Q496M5 336 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 DEFB134Q4QY38 66 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 LRRC23Q53EV4 343 aaPredicted RBP10.4□□□□□ -0.74
VTI1A-204ENST00000480057 TCTE1Q5JU00 501 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 COX20Q5RI15 118 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 C18orf63Q68DL7 685 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 TSSK4Q6SA08 328 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 ANGPTL8Q6UXH0 198 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 USP53Q70EK8 1073 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 C6orf120Q7Z4R8 191 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 KMT5CQ86Y97 462 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 MARVELD2Q8N4S9 558 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 FAM86B1Q8N7N1 296 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 OR4K14Q8NGD5 310 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 SUN3Q8TAQ9 357 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 ZCCHC10Q8TBK6 192 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 FAM110BQ8TC76 370 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 LZICQ8WZA0 190 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 TANKQ92844 425 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 CNRIP1Q96F85 164 aaPredicted RBP10.4□□□□□ -0.74
VTI1A-204ENST00000480057 RDH12Q96NR8 316 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 CIB1Q99828 191 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 DOHHQ9BU89 302 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 C3orf14Q9HBI5 128 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 IL1RAPQ9NPH3 570 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 UCKL1Q9NWZ5 548 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 NLGN3Q9NZ94 848 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 NTMQ9P121 344 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 SEMA5BQ9P283 1151 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 C5AR2Q9P296 337 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 LRIT1Q9P2V4 623 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 RAPGEFL1Q9UHV5 662 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 ACSL6Q9UKU0 697 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 PADI4Q9UM07 663 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 MAP4K5Q9Y4K4 846 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 SNX11Q9Y5W9 270 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 SNX8Q9Y5X2 465 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 RNF215Q9Y6U7 377 aa10.4□□□□□ -0.74
VTI1A-204ENST00000480057 ABCA7Q8IZY2 2146 aa10.39□□□□□ -0.75
VTI1A-204ENST00000480057 A0A1B0GTQ1 180 aa10.39□□□□□ -0.75
VTI1A-204ENST00000480057 FITM1A5D6W6 292 aa10.39□□□□□ -0.75
VTI1A-204ENST00000480057 TMEM247A6NEH6 219 aa10.39□□□□□ -0.75
VTI1A-204ENST00000480057 UPK1AO00322 258 aa10.39□□□□□ -0.75
VTI1A-204ENST00000480057 PLOD2O00469 737 aa10.39□□□□□ -0.75
VTI1A-204ENST00000480057 EMC8O43402 210 aa10.39□□□□□ -0.75
VTI1A-204ENST00000480057 SUV39H1O43463 412 aa10.39□□□□□ -0.75
VTI1A-204ENST00000480057 ASNA1O43681 348 aa10.39□□□□□ -0.75
VTI1A-204ENST00000480057 DUX1O43812 170 aa10.39□□□□□ -0.75
VTI1A-204ENST00000480057 SDC3O75056 442 aa10.39□□□□□ -0.75
VTI1A-204ENST00000480057 ERAL1O75616 437 aaKnown RBP10.39□□□□□ -0.75
VTI1A-204ENST00000480057 ZBTB11O95625 1053 aaPredicted RBP10.39□□□□□ -0.75
VTI1A-204ENST00000480057 CST1P01037 141 aa10.39□□□□□ -0.75
VTI1A-204ENST00000480057 RPSAP08865 295 aaKnown RBP10.39□□□□□ -0.75
VTI1A-204ENST00000480057 ALPPL2P10696 532 aa10.39□□□□□ -0.75
VTI1A-204ENST00000480057 EPHA8P29322 1005 aaPredicted RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms