RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 C16orf52Q8NHV5 167 aa21.76■■□□□ 1.07
C9orf3-215ENST00000478473 TMEM216Q9P0N5 145 aa21.76■■□□□ 1.07
C9orf3-215ENST00000478473 IQANK1A0A1B0GTG1 560 aa21.75■■□□□ 1.07
C9orf3-215ENST00000478473 A0A1W2PR48 441 aa21.75■■□□□ 1.07
C9orf3-215ENST00000478473 FAM58BPP0C7Q3 252 aa21.75■■□□□ 1.07
C9orf3-215ENST00000478473 HK2P52789 917 aa21.75■■□□□ 1.07
C9orf3-215ENST00000478473 HERVK_113P63132 956 aa21.75■■□□□ 1.07
C9orf3-215ENST00000478473 RNF4P78317 190 aa21.75■■□□□ 1.07
C9orf3-215ENST00000478473 FOLH1Q04609 750 aa21.75■■□□□ 1.07
C9orf3-215ENST00000478473 RBPJQ06330 500 aa21.75■■□□□ 1.07
C9orf3-215ENST00000478473 SPRED3Q2MJR0 410 aa21.75■■□□□ 1.07
C9orf3-215ENST00000478473 BNC2Q6ZN30 1099 aaPredicted RBP21.75■■□□□ 1.07
C9orf3-215ENST00000478473 MILR1Q7Z6M3 343 aa21.75■■□□□ 1.07
C9orf3-215ENST00000478473 CYP4Z2PQ8N1L4 340 aa21.75■■□□□ 1.07
C9orf3-215ENST00000478473 ZFP62Q8NB50 900 aaPredicted RBP21.75■■□□□ 1.07
C9orf3-215ENST00000478473 LRRN4CLQ8ND94 238 aa21.75■■□□□ 1.07
C9orf3-215ENST00000478473 NUBPLQ8TB37 319 aa21.75■■□□□ 1.07
C9orf3-215ENST00000478473 FBXL20Q96IG2 436 aa21.75■■□□□ 1.07
C9orf3-215ENST00000478473 RASL10BQ96S79 203 aa21.75■■□□□ 1.07
C9orf3-215ENST00000478473 PELOQ9BRX2 385 aaKnown RBP21.75■■□□□ 1.07
C9orf3-215ENST00000478473 ERVK-6Q9BXR3 956 aa21.75■■□□□ 1.07
C9orf3-215ENST00000478473 PSMC3IPQ9P2W1 217 aaPredicted RBP21.75■■□□□ 1.07
C9orf3-215ENST00000478473 ZNF225Q9UK10 706 aa21.75■■□□□ 1.07
C9orf3-215ENST00000478473 A0A1B0GTL3 188 aa21.74■■□□□ 1.07
C9orf3-215ENST00000478473 OR2J2O76002 312 aa21.74■■□□□ 1.07
C9orf3-215ENST00000478473 GPR75O95800 540 aa21.74■■□□□ 1.07
C9orf3-215ENST00000478473 GSTA1P08263 222 aa21.74■■□□□ 1.07
C9orf3-215ENST00000478473 COX7A2P14406 83 aa21.74■■□□□ 1.07
C9orf3-215ENST00000478473 HSD17B3P37058 310 aa21.74■■□□□ 1.07
C9orf3-215ENST00000478473 PLIN5Q00G26 463 aa21.74■■□□□ 1.07
C9orf3-215ENST00000478473 ID2Q02363 134 aa21.74■■□□□ 1.07
C9orf3-215ENST00000478473 MPEG1Q2M385 716 aa21.74■■□□□ 1.07
C9orf3-215ENST00000478473 RNFT1Q5M7Z0 435 aa21.74■■□□□ 1.07
C9orf3-215ENST00000478473 LETMD1Q6P1Q0 360 aa21.74■■□□□ 1.07
C9orf3-215ENST00000478473 CHERPQ8IWX8 916 aaKnown RBP21.74■■□□□ 1.07
C9orf3-215ENST00000478473 ZNF321PQ8N8H1 164 aa21.74■■□□□ 1.07
C9orf3-215ENST00000478473 OR5L2Q8NGL0 311 aa21.74■■□□□ 1.07
C9orf3-215ENST00000478473 TRPC4APQ8TEL6 797 aa21.74■■□□□ 1.07
C9orf3-215ENST00000478473 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.74■■□□□ 1.074e-8■■■■■ 162.9
C9orf3-215ENST00000478473 RBM18Q96H35 190 aaKnown RBP21.74■■□□□ 1.07
C9orf3-215ENST00000478473 SENP5Q96HI0 755 aaPredicted RBP21.74■■□□□ 1.07
C9orf3-215ENST00000478473 DGAT2Q96PD7 388 aa21.74■■□□□ 1.07
C9orf3-215ENST00000478473 OR8D2Q9GZM6 311 aa21.74■■□□□ 1.07
C9orf3-215ENST00000478473 BRF2Q9HAW0 419 aa21.74■■□□□ 1.07
C9orf3-215ENST00000478473 SEMA4BQ9NPR2 832 aaPredicted RBP21.74■■□□□ 1.07
C9orf3-215ENST00000478473 TRPS1Q9UHF7 1281 aa21.74■■□□□ 1.07
C9orf3-215ENST00000478473 MYOCOSA0A1B0GUC4 107 aa21.73■■□□□ 1.07
C9orf3-215ENST00000478473 KLRC4-KLRK1H3BQV0 150 aa21.73■■□□□ 1.07
C9orf3-215ENST00000478473 PPP6CO00743 305 aa21.73■■□□□ 1.07
C9orf3-215ENST00000478473 ASNA1O43681 348 aa21.73■■□□□ 1.07
C9orf3-215ENST00000478473 ALOX15P16050 662 aaPredicted RBP21.73■■□□□ 1.07
C9orf3-215ENST00000478473 TNNI3P19429 210 aa21.73■■□□□ 1.07
C9orf3-215ENST00000478473 TNFRSF8P28908 595 aa21.73■■□□□ 1.07
C9orf3-215ENST00000478473 SRSF11Q05519 484 aaKnown RBP21.73■■□□□ 1.07
C9orf3-215ENST00000478473 IFT88Q13099 833 aa21.73■■□□□ 1.07
C9orf3-215ENST00000478473 RASA2Q15283 850 aa21.73■■□□□ 1.07
C9orf3-215ENST00000478473 C1QL3Q5VWW1 255 aa21.73■■□□□ 1.07
C9orf3-215ENST00000478473 CYP20A1Q6UW02 462 aa21.73■■□□□ 1.07
C9orf3-215ENST00000478473 SH2D5Q6ZV89 423 aa21.73■■□□□ 1.07
C9orf3-215ENST00000478473 MDGA2Q7Z553 956 aa21.73■■□□□ 1.07
C9orf3-215ENST00000478473 SULF2Q8IWU5 870 aa21.73■■□□□ 1.07
C9orf3-215ENST00000478473 OR4N5Q8IXE1 308 aa21.73■■□□□ 1.07
C9orf3-215ENST00000478473 METTL4Q8N3J2 472 aa21.73■■□□□ 1.07
C9orf3-215ENST00000478473 CPSF7Q8N684 471 aaKnown RBP21.73■■□□□ 1.07
C9orf3-215ENST00000478473 ART5Q96L15 291 aa21.73■■□□□ 1.07
C9orf3-215ENST00000478473 TIMMDC1Q9NPL8 285 aa21.73■■□□□ 1.07
C9orf3-215ENST00000478473 AHSPQ9NZD4 102 aa21.73■■□□□ 1.07
C9orf3-215ENST00000478473 DLX3O60479 287 aa21.72■■□□□ 1.07
C9orf3-215ENST00000478473 SLC19A2O60779 497 aa21.72■■□□□ 1.07
C9orf3-215ENST00000478473 AIFM1O95831 613 aa21.72■■□□□ 1.07
C9orf3-215ENST00000478473 NR2F6P10588 404 aa21.72■■□□□ 1.07
C9orf3-215ENST00000478473 TAC1P20366 129 aa21.72■■□□□ 1.07
C9orf3-215ENST00000478473 IMPDH1P20839 514 aa21.72■■□□□ 1.07
C9orf3-215ENST00000478473 CDH13P55290 713 aa21.72■■□□□ 1.07
C9orf3-215ENST00000478473 CLCQ05315 142 aa21.72■■□□□ 1.07
C9orf3-215ENST00000478473 UNC50Q53HI1 259 aa21.72■■□□□ 1.07
C9orf3-215ENST00000478473 ZNF678Q5SXM1 525 aa21.72■■□□□ 1.07
C9orf3-215ENST00000478473 C16orf47Q6ZP98 133 aaPredicted RBP21.72■■□□□ 1.07
C9orf3-215ENST00000478473 DGAT2L6Q6ZPD8 337 aa21.72■■□□□ 1.07
C9orf3-215ENST00000478473 FJX1Q86VR8 437 aa21.72■■□□□ 1.07
C9orf3-215ENST00000478473 ZNF382Q96SR6 550 aa21.72■■□□□ 1.07
C9orf3-215ENST00000478473 ELOVL6Q9H5J4 265 aa21.72■■□□□ 1.07
C9orf3-215ENST00000478473 PPCSQ9HAB8 311 aa21.72■■□□□ 1.07
C9orf3-215ENST00000478473 WDR41Q9HAD4 459 aa21.72■■□□□ 1.07
C9orf3-215ENST00000478473 PRM3Q9NNZ6 103 aa21.72■■□□□ 1.07
C9orf3-215ENST00000478473 COPS7AQ9UBW8 275 aa21.72■■□□□ 1.07
C9orf3-215ENST00000478473 A1L4Q6 167 aa21.71■■□□□ 1.07
C9orf3-215ENST00000478473 A8MVJ9 347 aa21.71■■□□□ 1.07
C9orf3-215ENST00000478473 NPIPA5E9PKD4 350 aa21.71■■□□□ 1.07
C9orf3-215ENST00000478473 DYRK3O43781 588 aa21.71■■□□□ 1.07
C9orf3-215ENST00000478473 PEX1O43933 1283 aa21.71■■□□□ 1.07
C9orf3-215ENST00000478473 SLC35E2P0CK97 266 aa21.71■■□□□ 1.07
C9orf3-215ENST00000478473 ZNF24P17028 368 aa21.71■■□□□ 1.07
C9orf3-215ENST00000478473 ATP5F1P24539 256 aaPredicted RBP21.71■■□□□ 1.07
C9orf3-215ENST00000478473 PRKAA2P54646 552 aa21.71■■□□□ 1.07
C9orf3-215ENST00000478473 MTFR2Q6P444 385 aa21.71■■□□□ 1.07
C9orf3-215ENST00000478473 RPS27LQ71UM5 84 aaKnown RBP21.71■■□□□ 1.07
C9orf3-215ENST00000478473 PAGE2Q7Z2X7 111 aa21.71■■□□□ 1.07
C9orf3-215ENST00000478473 TDRPQ86YL5 185 aa21.71■■□□□ 1.07
C9orf3-215ENST00000478473 SPPL2CQ8IUH8 684 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms