RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 TRIP10Q15642 601 aa11.43□□□□□ -0.58
PRPF39-203ENST00000477626 PLK5Q496M5 336 aa11.43□□□□□ -0.58
PRPF39-203ENST00000477626 OR52E8Q6IFG1 317 aa11.43□□□□□ -0.58
PRPF39-203ENST00000477626 LGI4Q8N135 537 aa11.43□□□□□ -0.58
PRPF39-203ENST00000477626 NR1H4Q96RI1 486 aaPredicted RBP11.43□□□□□ -0.58
PRPF39-203ENST00000477626 BARD1Q99728 777 aaKnown RBP11.43□□□□□ -0.58
PRPF39-203ENST00000477626 NPLQ9BXD5 320 aaPredicted RBP11.43□□□□□ -0.58
PRPF39-203ENST00000477626 NEUROD4Q9HD90 331 aa11.43□□□□□ -0.58
PRPF39-203ENST00000477626 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.43□□□□□ -0.58
PRPF39-203ENST00000477626 BCAT2O15382 392 aaPredicted RBP11.43□□□□□ -0.58
PRPF39-203ENST00000477626 ATP1B1P05026 303 aa11.43□□□□□ -0.58
PRPF39-203ENST00000477626 HOXB6P17509 224 aaKnown RBP11.43□□□□□ -0.58
PRPF39-203ENST00000477626 CKMT2P17540 419 aa11.43□□□□□ -0.58
PRPF39-203ENST00000477626 PSMA4P25789 261 aaKnown RBP11.43□□□□□ -0.58
PRPF39-203ENST00000477626 MYBPC1Q00872 1141 aa11.43□□□□□ -0.58
PRPF39-203ENST00000477626 BLMHQ13867 455 aa11.43□□□□□ -0.58
PRPF39-203ENST00000477626 TBCELQ5QJ74 424 aa11.43□□□□□ -0.58
PRPF39-203ENST00000477626 TMTC4Q5T4D3 741 aa11.43□□□□□ -0.58
PRPF39-203ENST00000477626 AMIGO2Q86SJ2 522 aa11.43□□□□□ -0.58
PRPF39-203ENST00000477626 TSPYL5Q86VY4 417 aaPredicted RBP11.43□□□□□ -0.58
PRPF39-203ENST00000477626 ZNF761Q86XN6 746 aaPredicted RBP11.43□□□□□ -0.58
PRPF39-203ENST00000477626 PHF10Q8WUB8 498 aaKnown RBP11.43□□□□□ -0.58
PRPF39-203ENST00000477626 RSRC1Q96IZ7 334 aaKnown RBP11.43□□□□□ -0.58
PRPF39-203ENST00000477626 NSMCE2Q96MF7 247 aa11.43□□□□□ -0.58
PRPF39-203ENST00000477626 SEMA6AQ9H2E6 1030 aa11.43□□□□□ -0.58
PRPF39-203ENST00000477626 C8orf4Q9NR00 106 aa11.43□□□□□ -0.58
PRPF39-203ENST00000477626 MOSPD1Q9UJG1 213 aa11.43□□□□□ -0.58
PRPF39-203ENST00000477626 IGHV5-51A0A0C4DH38 117 aa11.42□□□□□ -0.58
PRPF39-203ENST00000477626 B4GAT1O43505 415 aa11.42□□□□□ -0.58
PRPF39-203ENST00000477626 VIPP01282 170 aa11.42□□□□□ -0.58
PRPF39-203ENST00000477626 CD1CP29017 333 aa11.42□□□□□ -0.58
PRPF39-203ENST00000477626 CSNK1EP49674 416 aaKnown RBP11.42□□□□□ -0.58
PRPF39-203ENST00000477626 APOFQ13790 326 aa11.42□□□□□ -0.58
PRPF39-203ENST00000477626 ZNF770Q6IQ21 691 aaPredicted RBP11.42□□□□□ -0.58
PRPF39-203ENST00000477626 PRSS42Q7Z5A4 293 aa11.42□□□□□ -0.58
PRPF39-203ENST00000477626 TAF8Q7Z7C8 310 aa11.42□□□□□ -0.58
PRPF39-203ENST00000477626 GKN2Q86XP6 184 aa11.42□□□□□ -0.58
PRPF39-203ENST00000477626 RNF130Q86XS8 419 aa11.42□□□□□ -0.58
PRPF39-203ENST00000477626 FAM181AQ8N9Y4 354 aa11.42□□□□□ -0.58
PRPF39-203ENST00000477626 SIMC1Q8NDZ2 872 aa11.42□□□□□ -0.58
PRPF39-203ENST00000477626 SLC38A5Q8WUX1 472 aa11.42□□□□□ -0.58
PRPF39-203ENST00000477626 HRASLS2Q9NWW9 162 aa11.42□□□□□ -0.58
PRPF39-203ENST00000477626 OAZ3Q9UMX2 235 aa11.42□□□□□ -0.58
PRPF39-203ENST00000477626 FAM149AA5PLN7 773 aa11.42□□□□□ -0.58
PRPF39-203ENST00000477626 CLOCKO15516 846 aa11.42□□□□□ -0.58
PRPF39-203ENST00000477626 PDPK1O15530 556 aa11.42□□□□□ -0.58
PRPF39-203ENST00000477626 ZSCAN9O15535 394 aaPredicted RBP11.42□□□□□ -0.58
PRPF39-203ENST00000477626 GUSBP08236 651 aa11.42□□□□□ -0.58
PRPF39-203ENST00000477626 RPS4Y1P22090 263 aaKnown RBP11.42□□□□□ -0.58
PRPF39-203ENST00000477626 HMGA2P52926 109 aa11.42□□□□□ -0.58
PRPF39-203ENST00000477626 PLA2G16P53816 162 aa11.42□□□□□ -0.58
PRPF39-203ENST00000477626 FOLH1Q04609 750 aa11.42□□□□□ -0.58
PRPF39-203ENST00000477626 FAHD1Q6P587 224 aa11.42□□□□□ -0.58
PRPF39-203ENST00000477626 SLC35F3Q8IY50 421 aa11.42□□□□□ -0.58
PRPF39-203ENST00000477626 OSBPL10Q9BXB5 764 aa11.42□□□□□ -0.58
PRPF39-203ENST00000477626 BCL2L10Q9HD36 194 aa11.42□□□□□ -0.58
PRPF39-203ENST00000477626 IGHV1OR21-1A0A087WYE8 117 aa11.42□□□□□ -0.58
PRPF39-203ENST00000477626 FFAR1O14842 300 aa11.42□□□□□ -0.58
PRPF39-203ENST00000477626 ONECUT2O95948 504 aa11.42□□□□□ -0.58
PRPF39-203ENST00000477626 HPRP00739 348 aa11.42□□□□□ -0.58
PRPF39-203ENST00000477626 FNTBP49356 437 aa11.42□□□□□ -0.58
PRPF39-203ENST00000477626 STXBP1P61764 594 aaKnown RBP11.42□□□□□ -0.58
PRPF39-203ENST00000477626 SRSF5Q13243 272 aaKnown RBP11.42□□□□□ -0.58
PRPF39-203ENST00000477626 SLC9A5Q14940 896 aa11.42□□□□□ -0.58
PRPF39-203ENST00000477626 ZNF528Q3MIS6 628 aa11.42□□□□□ -0.58
PRPF39-203ENST00000477626 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.42□□□□□ -0.582e-18■■■■■ 41.1
PRPF39-203ENST00000477626 TJAP1Q5JTD0 557 aa11.42□□□□□ -0.58
PRPF39-203ENST00000477626 ANKRD34AQ69YU3 496 aa11.42□□□□□ -0.58
PRPF39-203ENST00000477626 IRGCQ6NXR0 463 aa11.42□□□□□ -0.58
PRPF39-203ENST00000477626 GALNT10Q86SR1 603 aa11.42□□□□□ -0.58
PRPF39-203ENST00000477626 AVL9Q8NBF6 648 aa11.42□□□□□ -0.58
PRPF39-203ENST00000477626 ZBTB44Q8NCP5 570 aa11.42□□□□□ -0.58
PRPF39-203ENST00000477626 OR4D11Q8NGI4 311 aa11.42□□□□□ -0.58
PRPF39-203ENST00000477626 SLC41A2Q96JW4 573 aa11.42□□□□□ -0.58
PRPF39-203ENST00000477626 CIB1Q99828 191 aa11.42□□□□□ -0.58
PRPF39-203ENST00000477626 THUMPD3Q9BV44 507 aaKnown RBP11.42□□□□□ -0.58
PRPF39-203ENST00000477626 NDUFAF4Q9P032 175 aa11.42□□□□□ -0.58
PRPF39-203ENST00000477626 DTNAQ9Y4J8 743 aa11.42□□□□□ -0.58
PRPF39-203ENST00000477626 GPC6Q9Y625 555 aaPredicted RBP11.42□□□□□ -0.58
PRPF39-203ENST00000477626 MFN2O95140 757 aa11.41□□□□□ -0.58
PRPF39-203ENST00000477626 FCGR1AP12314 374 aa11.41□□□□□ -0.58
PRPF39-203ENST00000477626 SELENOWP63302 87 aa11.41□□□□□ -0.58
PRPF39-203ENST00000477626 GPR19Q15760 415 aa11.41□□□□□ -0.58
PRPF39-203ENST00000477626 WDR74Q6RFH5 385 aaPredicted RBP11.41□□□□□ -0.58
PRPF39-203ENST00000477626 FAM111BQ6SJ93 734 aa11.41□□□□□ -0.58
PRPF39-203ENST00000477626 ZNF574Q6ZN55 896 aaPredicted RBP11.41□□□□□ -0.58
PRPF39-203ENST00000477626 DGAT2L6Q6ZPD8 337 aa11.41□□□□□ -0.58
PRPF39-203ENST00000477626 ARL10Q8N8L6 244 aa11.41□□□□□ -0.58
PRPF39-203ENST00000477626 ZNF675Q8TD23 568 aa11.41□□□□□ -0.58
PRPF39-203ENST00000477626 SLC47A1Q96FL8 570 aa11.41□□□□□ -0.58
PRPF39-203ENST00000477626 SPACA7Q96KW9 195 aa11.41□□□□□ -0.58
PRPF39-203ENST00000477626 PRPF18Q99633 342 aaKnown RBP11.41□□□□□ -0.58
PRPF39-203ENST00000477626 GIN1Q9NXP7 522 aa11.41□□□□□ -0.58
PRPF39-203ENST00000477626 SPASTQ9UBP0 616 aa11.41□□□□□ -0.58
PRPF39-203ENST00000477626 MAGED1Q9Y5V3 778 aaPredicted RBP11.41□□□□□ -0.58
PRPF39-203ENST00000477626 SCN2AQ99250 2005 aa11.41□□□□□ -0.58
PRPF39-203ENST00000477626 ASNA1O43681 348 aa11.41□□□□□ -0.58
PRPF39-203ENST00000477626 BAG2O95816 211 aa11.41□□□□□ -0.58
PRPF39-203ENST00000477626 GPR3P46089 330 aa11.41□□□□□ -0.58
PRPF39-203ENST00000477626 PRICKLE4Q2TBC4 344 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms