RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 TTC27Q6P3X3 843 aa6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 CCDC137Q6PK04 289 aaKnown RBP6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 SBSNQ6UWP8 590 aa6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 SLC29A4Q7RTT9 530 aa6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 MAATS1Q7Z4T9 603 aa6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 LUZP2Q86TE4 346 aa6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 LACC1Q8IV20 430 aa6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 OR4N5Q8IXE1 308 aa6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 PPIL6Q8IXY8 311 aa6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 AGGF1Q8N302 714 aaeCLIP6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 MCUQ8NE86 351 aa6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 OR10G3Q8NGC4 313 aa6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 NEIL3Q8TAT5 605 aa6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 PTPMT1Q8WUK0 201 aaPredicted RBP6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 EXT2Q93063 718 aa6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 PPWD1Q96BP3 646 aaKnown RBP6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 MBD6Q96DN6 1003 aa6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 SPACA9Q96E40 222 aaPredicted RBP6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 CERS2Q96G23 380 aa6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 SIGLEC10Q96LC7 697 aa6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 ZNF597Q96LX8 424 aa6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 F2RL3Q96RI0 385 aa6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 SH3GL2Q99962 352 aa6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 DOHHQ9BU89 302 aa6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 ZFP64Q9NPA5 681 aa6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 WWOXQ9NZC7 414 aa6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 CTNNAL1Q9UBT7 734 aa6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 VTI1BQ9UEU0 232 aa6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 ASIC3Q9UHC3 531 aa6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 FOXD3Q9UJU5 478 aaPredicted RBP6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 IKZF3Q9UKT9 509 aa6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 DAPP1Q9UN19 280 aa6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 PPIEQ9UNP9 301 aaKnown RBP6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 VWA7Q9Y334 891 aa6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 RTTNQ86VV8 2226 aa6.15□□□□□ -1.43
RTFDC1-206ENST00000477485 FBN3Q75N90 2809 aa6.15□□□□□ -1.43
RTFDC1-206ENST00000477485 MED12LQ86YW9 2145 aa6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 IQANK1A0A1B0GTG1 560 aa6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 FAM171A2A8MVW0 826 aa6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 KIAA1324LA8MWY0 1029 aaPredicted RBP6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 H7C1Q1 480 aa6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 SAP18O00422 153 aaKnown RBP6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 RTCAO00442 366 aaKnown RBP6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 CASKO14936 926 aa6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 OR10H2O60403 315 aa6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 SMPD2O60906 423 aa6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 ERN1O75460 977 aaKnown RBP6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 CLEC3AO75596 197 aa6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 ETHE1O95571 254 aa6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 TTC4O95801 387 aa6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 LY6G6DO95868 133 aa6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 EPPINO95925 133 aa6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 ZNF37AP17032 561 aaPredicted RBP6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 CPOXP36551 454 aa6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 SSR2P43308 183 aa6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 RPL21P46778 160 aaKnown RBP6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 KCNC1P48547 511 aa6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 HNMTP50135 292 aa6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 ZNF136P52737 540 aa6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 SLC12A2P55011 1212 aa6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 HERVK_113P63132 956 aa6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 ERVK-8P63133 956 aa6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 PLIN5Q00G26 463 aa6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 DDX39BQ13838 428 aaKnown RBP6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 HIST2H2ACQ16777 129 aaPredicted RBP6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 PPP1R3AQ16821 1122 aa6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 HYAL4Q2M3T9 481 aa6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 AP5B1Q2VPB7 878 aa6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 PIGGQ5H8A4 983 aa6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 HIST2H2AA3Q6FI13 130 aa6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 ABHD17CQ6PCB6 329 aa6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 SLCO4C1Q6ZQN7 724 aa6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 SEM1Q6ZVN7 128 aa6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 C9orf40Q8IXQ3 194 aa6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 PM20D2Q8IYS1 436 aa6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 NKAPQ8N5F7 415 aaKnown RBP6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 NAT8LQ8N9F0 302 aa6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 OR8K3Q8NH51 312 aa6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 ZNF721Q8TF20 911 aa6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 GRK7Q8WTQ7 553 aa6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 DIO2Q92813 273 aa6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 RBM18Q96H35 190 aaKnown RBP6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 MS4A14Q96JA4 679 aa6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 ART5Q96L15 291 aa6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 QRFPRQ96P65 431 aa6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 KCNC2Q96PR1 638 aa6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 MAPKAP1Q9BPZ7 522 aa6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 ERVK-6Q9BXR3 956 aa6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 ROGDIQ9GZN7 287 aa6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 RBSNQ9H1K0 784 aa6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 CNIH4Q9P003 139 aa6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 CHMP2BQ9UQN3 213 aa6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 ERVK-19Q9WJR5 959 aa6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 EIF3LQ9Y262 564 aaKnown RBP6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 SLC6A5Q9Y345 797 aa6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 OARD1Q9Y530 152 aa6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 CLDN16Q9Y5I7 305 aa6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 DSCAMO60469 2012 aa6.14□□□□□ -1.43
RTFDC1-206ENST00000477485 VPS13CQ709C8 3753 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms