RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 ERVK-11Q9UQG0 969 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 ITPR2Q14571 2701 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 LCMT2O60294 686 aaKnown RBP6.77□□□□□ -1.33
BRCA1-214ENST00000477152 NEURL1O76050 574 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 ZFAND5O76080 213 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 TUBB4AP04350 444 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 TPOP07202 933 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 SERPINA6P08185 405 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 ZNF888P0CJ79 500 aaPredicted RBP6.77□□□□□ -1.33
BRCA1-214ENST00000477152 CHRNB4P30926 498 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 MEOX1P50221 254 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 SSR4P51571 173 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 ITGA8P53708 1063 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 PLGLB1Q02325 96 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 TLE4Q04727 773 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 RBBP5Q15291 538 aaKnown RBP6.77□□□□□ -1.33
BRCA1-214ENST00000477152 HECTD2Q5U5R9 776 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 PAQR3Q6TCH7 311 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 PRSS41Q7RTY9 318 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 PDIK1LQ8N165 341 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 CYP4Z2PQ8N1L4 340 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 TCAIMQ8N3R3 496 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 ZNF740Q8NDX6 193 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 B3GNT7Q8NFL0 401 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 CREB3L4Q8TEY5 395 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 LRRC39Q96DD0 335 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 PDLIM5Q96HC4 596 aaKnown RBP6.77□□□□□ -1.33
BRCA1-214ENST00000477152 EGFL8Q99944 293 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 MESP1Q9BRJ9 268 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 COPS7BQ9H9Q2 264 aaPredicted RBP6.77□□□□□ -1.33
BRCA1-214ENST00000477152 KCNJ16Q9NPI9 418 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 LANCL2Q9NS86 450 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 ASIC3Q9UHC3 531 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 FBXW2Q9UKT8 454 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 YARS2Q9Y2Z4 477 aaKnown RBP6.77□□□□□ -1.33
BRCA1-214ENST00000477152 VWA7Q9Y334 891 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 ZNF860A6NHJ4 632 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 ANKDD1BA6NHY2 528 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 A8MVJ9 347 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 B3GALT2O43825 422 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 CDC40O60508 579 aaKnown RBP eCLIP6.77□□□□□ -1.33
BRCA1-214ENST00000477152 STATHP02808 62 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 AMY2AP04746 511 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 HOXD4P09016 255 aaPredicted RBP6.77□□□□□ -1.33
BRCA1-214ENST00000477152 PRKCAP17252 672 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 GNAZP19086 355 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 AMY2BP19961 511 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 CXCR5P32302 372 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 MECP2P51608 486 aaKnown RBP6.77□□□□□ -1.33
BRCA1-214ENST00000477152 SLC12A2P55011 1212 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 HSD17B7P56937 341 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 CDKL1Q00532 357 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 BIKQ13323 160 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 CRYMQ14894 314 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 CYP1B1Q16678 543 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 HIST2H2ACQ16777 129 aaPredicted RBP6.77□□□□□ -1.33
BRCA1-214ENST00000477152 NDUFAF5Q5TEU4 345 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 HIST2H2AA3Q6FI13 130 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 SLC22A16Q86VW1 577 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 DOLPP1Q86YN1 238 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 RASGEF1CQ8N431 466 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 NAT8LQ8N9F0 302 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 SRFBP1Q8NEF9 429 aaKnown RBP6.77□□□□□ -1.33
BRCA1-214ENST00000477152 OR5L2Q8NGL0 311 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 ASB15Q8WXK1 588 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 DAZLQ92904 295 aaKnown RBP6.77□□□□□ -1.33
BRCA1-214ENST00000477152 KIAA1191Q96A73 305 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 CERS2Q96G23 380 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 SIGLEC10Q96LC7 697 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 ENKD1Q9H0I2 346 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 CNOT10Q9H9A5 744 aaKnown RBP6.77□□□□□ -1.33
BRCA1-214ENST00000477152 SMURF1Q9HCE7 757 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 PRTFDC1Q9NRG1 225 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 HPF1Q9NWY4 346 aa6.77□□□□□ -1.33
BRCA1-214ENST00000477152 CENPEQ02224 2701 aa6.76□□□□□ -1.33
BRCA1-214ENST00000477152 TRBV11-1A0A0K0K1C0 115 aa6.76□□□□□ -1.33
BRCA1-214ENST00000477152 OR14I1A6ND48 311 aa6.76□□□□□ -1.33
BRCA1-214ENST00000477152 BCKDKO14874 412 aa6.76□□□□□ -1.33
BRCA1-214ENST00000477152 CLGNO14967 610 aa6.76□□□□□ -1.33
BRCA1-214ENST00000477152 PEX1O43933 1283 aa6.76□□□□□ -1.33
BRCA1-214ENST00000477152 GUCA1CO95843 209 aa6.76□□□□□ -1.33
BRCA1-214ENST00000477152 TFEBP19484 476 aa6.76□□□□□ -1.33
BRCA1-214ENST00000477152 ENDOUP21128 410 aaKnown RBP6.76□□□□□ -1.33
BRCA1-214ENST00000477152 SAT1P21673 171 aa6.76□□□□□ -1.33
BRCA1-214ENST00000477152 MAGEA3P43357 314 aa6.76□□□□□ -1.33
BRCA1-214ENST00000477152 REEP5Q00765 189 aa6.76□□□□□ -1.33
BRCA1-214ENST00000477152 SLC13A2Q13183 592 aa6.76□□□□□ -1.33
BRCA1-214ENST00000477152 BMPR2Q13873 1038 aa6.76□□□□□ -1.33
BRCA1-214ENST00000477152 EFTUD2Q15029 972 aaKnown RBP eCLIP6.76□□□□□ -1.33
BRCA1-214ENST00000477152 SF3B4Q15427 424 aaKnown RBP eCLIP6.76□□□□□ -1.33
BRCA1-214ENST00000477152 TOR1AIP1Q5JTV8 583 aa6.76□□□□□ -1.33
BRCA1-214ENST00000477152 ANKRD22Q5VYY1 191 aa6.76□□□□□ -1.33
BRCA1-214ENST00000477152 TRIM40Q6P9F5 258 aa6.76□□□□□ -1.33
BRCA1-214ENST00000477152 SYDE1Q6ZW31 735 aaPredicted RBP6.76□□□□□ -1.33
BRCA1-214ENST00000477152 TMPRSS11BQ86T26 416 aa6.76□□□□□ -1.33
BRCA1-214ENST00000477152 THOC6Q86W42 341 aaKnown RBP6.76□□□□□ -1.33
BRCA1-214ENST00000477152 PDSS2Q86YH6 399 aa6.76□□□□□ -1.33
BRCA1-214ENST00000477152 SIAH3Q8IW03 269 aa6.76□□□□□ -1.33
BRCA1-214ENST00000477152 CNTN4Q8IWV2 1026 aa6.76□□□□□ -1.33
BRCA1-214ENST00000477152 ZNF595Q8IYB9 648 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms