RNA–Protein interactions for RNA: ENST00000476842.1

SMIM4-202, Transcript of small integral membrane protein 4, humanhuman

TSL 4 BASIC

Gene SMIM4, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-202ENST00000476842 NDUFAF5Q5TEU4 345 aa16.65■□□□□ 0.26
SMIM4-202ENST00000476842 OR4N5Q8IXE1 308 aa16.65■□□□□ 0.26
SMIM4-202ENST00000476842 TMEM132CQ8N3T6 1108 aa16.65■□□□□ 0.26
SMIM4-202ENST00000476842 DNAJB14Q8TBM8 379 aa16.65■□□□□ 0.26
SMIM4-202ENST00000476842 MGARPQ8TDB4 240 aa16.65■□□□□ 0.26
SMIM4-202ENST00000476842 BRIX1Q8TDN6 353 aaKnown RBP16.65■□□□□ 0.26
SMIM4-202ENST00000476842 ELP5Q8TE02 316 aa16.65■□□□□ 0.26
SMIM4-202ENST00000476842 TWIST2Q8WVJ9 160 aa16.65■□□□□ 0.26
SMIM4-202ENST00000476842 UCN3Q969E3 161 aa16.65■□□□□ 0.26
SMIM4-202ENST00000476842 LMF1Q96S06 567 aa16.65■□□□□ 0.26
SMIM4-202ENST00000476842 ZNF395Q9H8N7 513 aaPredicted RBP16.65■□□□□ 0.26
SMIM4-202ENST00000476842 PPIEQ9UNP9 301 aaKnown RBP16.65■□□□□ 0.26
SMIM4-202ENST00000476842 PCDHA9Q9Y5H5 950 aa16.65■□□□□ 0.26
SMIM4-202ENST00000476842 MYOCOSA0A1B0GUC4 107 aa16.64■□□□□ 0.25
SMIM4-202ENST00000476842 C1orf226A1L170 272 aa16.64■□□□□ 0.25
SMIM4-202ENST00000476842 GLOD5A6NK44 160 aa16.64■□□□□ 0.25
SMIM4-202ENST00000476842 HMGB1P1B2RPK0 211 aaPredicted RBP16.64■□□□□ 0.25
SMIM4-202ENST00000476842 PCDH7O60245 1069 aa16.64■□□□□ 0.25
SMIM4-202ENST00000476842 SEC22BO75396 215 aa16.64■□□□□ 0.25
SMIM4-202ENST00000476842 LYPLA1O75608 230 aaPredicted RBP16.64■□□□□ 0.25
SMIM4-202ENST00000476842 MYO1DO94832 1006 aa16.64■□□□□ 0.25
SMIM4-202ENST00000476842 LINC00032P0C843 101 aa16.64■□□□□ 0.25
SMIM4-202ENST00000476842 NR1D1P20393 614 aa16.64■□□□□ 0.25
SMIM4-202ENST00000476842 TIA1P31483 386 aaKnown RBP eCLIP16.64■□□□□ 0.25
SMIM4-202ENST00000476842 GSTM5P46439 218 aa16.64■□□□□ 0.25
SMIM4-202ENST00000476842 ID2Q02363 134 aa16.64■□□□□ 0.25
SMIM4-202ENST00000476842 KIAA0040Q15053 153 aa16.64■□□□□ 0.25
SMIM4-202ENST00000476842 CRB2Q5IJ48 1285 aa16.64■□□□□ 0.25
SMIM4-202ENST00000476842 OR52E8Q6IFG1 317 aa16.64■□□□□ 0.25
SMIM4-202ENST00000476842 H3F3CQ6NXT2 135 aa16.64■□□□□ 0.25
SMIM4-202ENST00000476842 IGFL2Q6UWQ7 119 aa16.64■□□□□ 0.25
SMIM4-202ENST00000476842 IGFL3Q6UXB1 125 aa16.64■□□□□ 0.25
SMIM4-202ENST00000476842 PTPMT1Q8WUK0 201 aaPredicted RBP16.64■□□□□ 0.25
SMIM4-202ENST00000476842 RBM18Q96H35 190 aaKnown RBP16.64■□□□□ 0.25
SMIM4-202ENST00000476842 CCT7Q99832 543 aa16.64■□□□□ 0.25
SMIM4-202ENST00000476842 C20orf27Q9GZN8 174 aa16.64■□□□□ 0.25
SMIM4-202ENST00000476842 ILKAPQ9H0C8 392 aaPredicted RBP16.64■□□□□ 0.25
SMIM4-202ENST00000476842 C1orf109Q9NX04 203 aa16.64■□□□□ 0.25
SMIM4-202ENST00000476842 HAO1Q9UJM8 370 aa16.64■□□□□ 0.25
SMIM4-202ENST00000476842 CES1P1Q9UKY3 287 aa16.64■□□□□ 0.25
SMIM4-202ENST00000476842 RAP2CQ9Y3L5 183 aa16.64■□□□□ 0.25
SMIM4-202ENST00000476842 PTGDR2Q9Y5Y4 395 aa16.64■□□□□ 0.25
SMIM4-202ENST00000476842 CLCA3PQ9Y6N3 262 aa16.64■□□□□ 0.25
SMIM4-202ENST00000476842 MED13Q9UHV7 2174 aa16.63■□□□□ 0.25
SMIM4-202ENST00000476842 GNG14A0A1W2PPG7 69 aa16.63■□□□□ 0.25
SMIM4-202ENST00000476842 PIP5K1BO14986 540 aa16.63■□□□□ 0.25
SMIM4-202ENST00000476842 PRB1P04280 392 aa16.63■□□□□ 0.25
SMIM4-202ENST00000476842 ANXA4P09525 319 aaPredicted RBP16.63■□□□□ 0.25
SMIM4-202ENST00000476842 DRD2P14416 443 aa16.63■□□□□ 0.25
SMIM4-202ENST00000476842 TNNI3P19429 210 aa16.63■□□□□ 0.25
SMIM4-202ENST00000476842 SOX11P35716 441 aa16.63■□□□□ 0.25
SMIM4-202ENST00000476842 STT3AP46977 705 aa16.63■□□□□ 0.25
SMIM4-202ENST00000476842 GPR143P51810 404 aa16.63■□□□□ 0.25
SMIM4-202ENST00000476842 TAS2R50P59544 299 aa16.63■□□□□ 0.25
SMIM4-202ENST00000476842 BST1Q10588 318 aa16.63■□□□□ 0.25
SMIM4-202ENST00000476842 SLC48A1Q6P1K1 146 aa16.63■□□□□ 0.25
SMIM4-202ENST00000476842 ISLR2Q6UXK2 745 aa16.63■□□□□ 0.25
SMIM4-202ENST00000476842 TRIM42Q8IWZ5 723 aa16.63■□□□□ 0.25
SMIM4-202ENST00000476842 DDIASQ8IXT1 998 aa16.63■□□□□ 0.25
SMIM4-202ENST00000476842 MORN4Q8NDC4 146 aa16.63■□□□□ 0.25
SMIM4-202ENST00000476842 B3GNT7Q8NFL0 401 aa16.63■□□□□ 0.25
SMIM4-202ENST00000476842 OR4K14Q8NGD5 310 aa16.63■□□□□ 0.25
SMIM4-202ENST00000476842 OR2T11Q8NH01 316 aa16.63■□□□□ 0.25
SMIM4-202ENST00000476842 RAB3IL1Q8TBN0 382 aa16.63■□□□□ 0.25
SMIM4-202ENST00000476842 AGR3Q8TD06 166 aa16.63■□□□□ 0.25
SMIM4-202ENST00000476842 C16orf78Q8WTQ4 265 aa16.63■□□□□ 0.25
SMIM4-202ENST00000476842 DAZLQ92904 295 aaKnown RBP16.63■□□□□ 0.25
SMIM4-202ENST00000476842 SORT1Q99523 831 aa16.63■□□□□ 0.25
SMIM4-202ENST00000476842 FAIM2Q9BWQ8 316 aa16.63■□□□□ 0.25
SMIM4-202ENST00000476842 KCNK13Q9HB14 408 aa16.63■□□□□ 0.25
SMIM4-202ENST00000476842 LRTM1Q9HBL6 345 aa16.63■□□□□ 0.25
SMIM4-202ENST00000476842 PTGFRNQ9P2B2 879 aa16.63■□□□□ 0.25
SMIM4-202ENST00000476842 PSME2Q9UL46 239 aa16.63■□□□□ 0.25
SMIM4-202ENST00000476842 DLGAP4Q9Y2H0 992 aa16.63■□□□□ 0.25
SMIM4-202ENST00000476842 WBP11Q9Y2W2 641 aaKnown RBP16.63■□□□□ 0.25
SMIM4-202ENST00000476842 UQCRHLA0A096LP55 91 aa16.62■□□□□ 0.25
SMIM4-202ENST00000476842 DPM1O60762 260 aa16.62■□□□□ 0.25
SMIM4-202ENST00000476842 UQCRHP07919 91 aa16.62■□□□□ 0.25
SMIM4-202ENST00000476842 SLC35E2P0CK97 266 aa16.62■□□□□ 0.25
SMIM4-202ENST00000476842 ALOX15P16050 662 aaPredicted RBP16.62■□□□□ 0.25
SMIM4-202ENST00000476842 PIK3R1P27986 724 aa16.62■□□□□ 0.25
SMIM4-202ENST00000476842 GALNSP34059 522 aa16.62■□□□□ 0.25
SMIM4-202ENST00000476842 NFATC3Q12968 1075 aa16.62■□□□□ 0.25
SMIM4-202ENST00000476842 ATG16L1Q676U5 607 aa16.62■□□□□ 0.25
SMIM4-202ENST00000476842 NOXRED1Q6NXP6 359 aa16.62■□□□□ 0.25
SMIM4-202ENST00000476842 ST13P4Q8IZP2 240 aaPredicted RBP16.62■□□□□ 0.25
SMIM4-202ENST00000476842 KIRREL3Q8IZU9 778 aa16.62■□□□□ 0.25
SMIM4-202ENST00000476842 ZNF843Q8N446 348 aa16.62■□□□□ 0.25
SMIM4-202ENST00000476842 SIRT6Q8N6T7 355 aa16.62■□□□□ 0.25
SMIM4-202ENST00000476842 ZNF781Q8N8C0 355 aa16.62■□□□□ 0.25
SMIM4-202ENST00000476842 APCDD1LQ8NCL9 501 aa16.62■□□□□ 0.25
SMIM4-202ENST00000476842 OR14A16Q8NHC5 309 aa16.62■□□□□ 0.25
SMIM4-202ENST00000476842 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.62■□□□□ 0.25
SMIM4-202ENST00000476842 TM9SF4Q92544 642 aa16.62■□□□□ 0.25
SMIM4-202ENST00000476842 DGAT2Q96PD7 388 aa16.62■□□□□ 0.25
SMIM4-202ENST00000476842 PELOQ9BRX2 385 aaKnown RBP16.62■□□□□ 0.25
SMIM4-202ENST00000476842 ZBTB20Q9HC78 741 aaPredicted RBP16.62■□□□□ 0.25
SMIM4-202ENST00000476842 PFDN4Q9NQP4 134 aa16.62■□□□□ 0.25
SMIM4-202ENST00000476842 ZNF446Q9NWS9 450 aa16.62■□□□□ 0.25
SMIM4-202ENST00000476842 NUP210LQ5VU65 1888 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms