RNA–Protein interactions for RNA: ENST00000475464.1

PTP4A2-204, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 366 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-204ENST00000475464 FOXD3Q9UJU5 478 aaPredicted RBP9.39□□□□□ -0.91
PTP4A2-204ENST00000475464 PCDHGB3Q9Y5G1 929 aa9.39□□□□□ -0.91
PTP4A2-204ENST00000475464 FLNAP21333 2647 aaKnown RBP9.39□□□□□ -0.91
PTP4A2-204ENST00000475464 PHF3Q92576 2039 aaKnown RBP9.39□□□□□ -0.91
PTP4A2-204ENST00000475464 AHRRA9YTQ3 701 aa9.38□□□□□ -0.91
PTP4A2-204ENST00000475464 TRAPPC6AO75865 159 aa9.38□□□□□ -0.91
PTP4A2-204ENST00000475464 EPPINO95925 133 aa9.38□□□□□ -0.91
PTP4A2-204ENST00000475464 INHBBP09529 407 aa9.38□□□□□ -0.91
PTP4A2-204ENST00000475464 CPN2P22792 545 aa9.38□□□□□ -0.91
PTP4A2-204ENST00000475464 GDF1P27539 372 aa9.38□□□□□ -0.91
PTP4A2-204ENST00000475464 SERPINB3P29508 390 aa9.38□□□□□ -0.91
PTP4A2-204ENST00000475464 WNT3P56703 355 aa9.38□□□□□ -0.91
PTP4A2-204ENST00000475464 ZNF460Q14592 562 aa9.38□□□□□ -0.91
PTP4A2-204ENST00000475464 CYP1B1Q16678 543 aa9.38□□□□□ -0.91
PTP4A2-204ENST00000475464 HIST2H2ACQ16777 129 aaPredicted RBP9.38□□□□□ -0.91
PTP4A2-204ENST00000475464 ADPRMQ3LIE5 342 aa9.38□□□□□ -0.91
PTP4A2-204ENST00000475464 HIST2H2AA3Q6FI13 130 aa9.38□□□□□ -0.91
PTP4A2-204ENST00000475464 ADNP2Q6IQ32 1131 aa9.38□□□□□ -0.91
PTP4A2-204ENST00000475464 TRMT10BQ6PF06 316 aaKnown RBP9.38□□□□□ -0.91
PTP4A2-204ENST00000475464 CLEC9AQ6UXN8 241 aa9.38□□□□□ -0.91
PTP4A2-204ENST00000475464 ZNF662Q6ZS27 426 aa9.38□□□□□ -0.91
PTP4A2-204ENST00000475464 CHSY3Q70JA7 882 aa9.38□□□□□ -0.91
PTP4A2-204ENST00000475464 VN1R5Q7Z5H4 357 aa9.38□□□□□ -0.91
PTP4A2-204ENST00000475464 ADAMTSL2Q86TH1 951 aa9.38□□□□□ -0.91
PTP4A2-204ENST00000475464 RASGEF1CQ8N431 466 aa9.38□□□□□ -0.91
PTP4A2-204ENST00000475464 ACOT4Q8N9L9 421 aa9.38□□□□□ -0.91
PTP4A2-204ENST00000475464 SNX31Q8N9S9 440 aa9.38□□□□□ -0.91
PTP4A2-204ENST00000475464 NAXEQ8NCW5 288 aa9.38□□□□□ -0.91
PTP4A2-204ENST00000475464 SRFBP1Q8NEF9 429 aaKnown RBP9.38□□□□□ -0.91
PTP4A2-204ENST00000475464 C7orf57Q8NEG2 295 aa9.38□□□□□ -0.91
PTP4A2-204ENST00000475464 LINC01560Q8TB33 94 aa9.38□□□□□ -0.91
PTP4A2-204ENST00000475464 PAQR8Q8TEZ7 354 aa9.38□□□□□ -0.91
PTP4A2-204ENST00000475464 ANKRD7Q92527 254 aa9.38□□□□□ -0.91
PTP4A2-204ENST00000475464 PPWD1Q96BP3 646 aaKnown RBP9.38□□□□□ -0.91
PTP4A2-204ENST00000475464 RHBDF1Q96CC6 855 aa9.38□□□□□ -0.91
PTP4A2-204ENST00000475464 SPACA9Q96E40 222 aaPredicted RBP9.38□□□□□ -0.91
PTP4A2-204ENST00000475464 RBM18Q96H35 190 aaKnown RBP9.38□□□□□ -0.91
PTP4A2-204ENST00000475464 PBKQ96KB5 322 aa9.38□□□□□ -0.91
PTP4A2-204ENST00000475464 KRT12Q99456 494 aa9.38□□□□□ -0.91
PTP4A2-204ENST00000475464 MAPKAP1Q9BPZ7 522 aa9.38□□□□□ -0.91
PTP4A2-204ENST00000475464 DOHHQ9BU89 302 aa9.38□□□□□ -0.91
PTP4A2-204ENST00000475464 EPB41L4BQ9H329 900 aa9.38□□□□□ -0.91
PTP4A2-204ENST00000475464 ZNF395Q9H8N7 513 aaPredicted RBP9.38□□□□□ -0.91
PTP4A2-204ENST00000475464 CNOT10Q9H9A5 744 aaKnown RBP9.38□□□□□ -0.91
PTP4A2-204ENST00000475464 PRDM7Q9NQW5 492 aa9.38□□□□□ -0.91
PTP4A2-204ENST00000475464 DNAJC11Q9NVH1 559 aa9.38□□□□□ -0.91
PTP4A2-204ENST00000475464 QPCTLQ9NXS2 382 aa9.38□□□□□ -0.91
PTP4A2-204ENST00000475464 WWOXQ9NZC7 414 aa9.38□□□□□ -0.91
PTP4A2-204ENST00000475464 GPRC5BQ9NZH0 403 aa9.38□□□□□ -0.91
PTP4A2-204ENST00000475464 CNIH4Q9P003 139 aa9.38□□□□□ -0.91
PTP4A2-204ENST00000475464 ZNF629Q9UEG4 869 aaPredicted RBP9.38□□□□□ -0.91
PTP4A2-204ENST00000475464 ZNF490Q9ULM2 529 aaPredicted RBP9.38□□□□□ -0.91
PTP4A2-204ENST00000475464 GOLGA6L10A0A0M3HER8 536 aa9.37□□□□□ -0.91
PTP4A2-204ENST00000475464 IQANK1A0A1B0GTG1 560 aa9.37□□□□□ -0.91
PTP4A2-204ENST00000475464 LRRC3CA6NJW4 275 aa9.37□□□□□ -0.91
PTP4A2-204ENST00000475464 EEF1E1-BLOC1S5C9J1V9 151 aa9.37□□□□□ -0.91
PTP4A2-204ENST00000475464 PGRMC1O00264 195 aaKnown RBP9.37□□□□□ -0.91
PTP4A2-204ENST00000475464 RTCAO00442 366 aaKnown RBP9.37□□□□□ -0.91
PTP4A2-204ENST00000475464 DNALI1O14645 258 aaPredicted RBP9.37□□□□□ -0.91
PTP4A2-204ENST00000475464 EEF1E1O43324 174 aaKnown RBP9.37□□□□□ -0.91
PTP4A2-204ENST00000475464 SH3BGRLO75368 114 aa9.37□□□□□ -0.91
PTP4A2-204ENST00000475464 LRATO95237 230 aa9.37□□□□□ -0.91
PTP4A2-204ENST00000475464 TBX6O95947 436 aaPredicted RBP9.37□□□□□ -0.91
PTP4A2-204ENST00000475464 ATP5A1P25705 553 aaKnown RBP9.37□□□□□ -0.91
PTP4A2-204ENST00000475464 CEACAM8P31997 349 aaPredicted RBP9.37□□□□□ -0.91
PTP4A2-204ENST00000475464 ELK3P41970 407 aa9.37□□□□□ -0.91
PTP4A2-204ENST00000475464 STT3AP46977 705 aa9.37□□□□□ -0.91
PTP4A2-204ENST00000475464 SLC6A12P48065 614 aa9.37□□□□□ -0.91
PTP4A2-204ENST00000475464 AGFG1P52594 562 aaKnown RBP9.37□□□□□ -0.91
PTP4A2-204ENST00000475464 SLC12A2P55011 1212 aa9.37□□□□□ -0.91
PTP4A2-204ENST00000475464 TAS2R39P59534 338 aa9.37□□□□□ -0.91
PTP4A2-204ENST00000475464 DUSP8Q13202 625 aa9.37□□□□□ -0.91
PTP4A2-204ENST00000475464 DOC2AQ14183 400 aa9.37□□□□□ -0.91
PTP4A2-204ENST00000475464 PCBP2Q15366 365 aaKnown RBP eCLIP9.37□□□□□ -0.911e-7■■■■□ 24.4
PTP4A2-204ENST00000475464 TOMM20Q15388 145 aa9.37□□□□□ -0.91
PTP4A2-204ENST00000475464 SF3B4Q15427 424 aaKnown RBP eCLIP9.37□□□□□ -0.911e-6■□□□□ 11.3
PTP4A2-204ENST00000475464 AP5B1Q2VPB7 878 aa9.37□□□□□ -0.91
PTP4A2-204ENST00000475464 FBXL19-AS1Q494R0 122 aa9.37□□□□□ -0.91
PTP4A2-204ENST00000475464 ACSF3Q4G176 576 aaPredicted RBP9.37□□□□□ -0.91
PTP4A2-204ENST00000475464 FBXO48Q5FWF7 155 aa9.37□□□□□ -0.91
PTP4A2-204ENST00000475464 PAGE2BQ5JRK9 111 aa9.37□□□□□ -0.91
PTP4A2-204ENST00000475464 TMEM198Q66K66 360 aa9.37□□□□□ -0.91
PTP4A2-204ENST00000475464 SLC29A4Q7RTT9 530 aa9.37□□□□□ -0.91
PTP4A2-204ENST00000475464 LACC1Q8IV20 430 aa9.37□□□□□ -0.91
PTP4A2-204ENST00000475464 C9orf40Q8IXQ3 194 aa9.37□□□□□ -0.91
PTP4A2-204ENST00000475464 DND1Q8IYX4 353 aaKnown RBP9.37□□□□□ -0.91
PTP4A2-204ENST00000475464 PDIK1LQ8N165 341 aa9.37□□□□□ -0.91
PTP4A2-204ENST00000475464 LRRC25Q8N386 305 aaPredicted RBP9.37□□□□□ -0.91
PTP4A2-204ENST00000475464 TCAIMQ8N3R3 496 aa9.37□□□□□ -0.91
PTP4A2-204ENST00000475464 SLC15A4Q8N697 577 aa9.37□□□□□ -0.91
PTP4A2-204ENST00000475464 OR10G3Q8NGC4 313 aa9.37□□□□□ -0.91
PTP4A2-204ENST00000475464 NUBPLQ8TB37 319 aa9.37□□□□□ -0.91
PTP4A2-204ENST00000475464 DOK4Q8TEW6 326 aa9.37□□□□□ -0.91
PTP4A2-204ENST00000475464 ANKRD9Q96BM1 317 aaPredicted RBP9.37□□□□□ -0.91
PTP4A2-204ENST00000475464 HSPBAP1Q96EW2 488 aa9.37□□□□□ -0.91
PTP4A2-204ENST00000475464 VPS39Q96JC1 886 aa9.37□□□□□ -0.91
PTP4A2-204ENST00000475464 ART5Q96L15 291 aa9.37□□□□□ -0.91
PTP4A2-204ENST00000475464 GAL3ST4Q96RP7 486 aa9.37□□□□□ -0.91
PTP4A2-204ENST00000475464 TIMP4Q99727 224 aa9.37□□□□□ -0.91
PTP4A2-204ENST00000475464 TBCDQ9BTW9 1192 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms