RNA–Protein interactions for RNA: ENST00000475049.5

SDHB-204, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 3

Gene SDHB, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-204ENST00000475049 STRADBQ9C0K7 418 aa3.41□□□□□ -1.86
SDHB-204ENST00000475049 WWP1Q9H0M0 922 aa3.41□□□□□ -1.86
SDHB-204ENST00000475049 THAP9Q9H5L6 903 aa3.41□□□□□ -1.86
SDHB-204ENST00000475049 DBNDD1Q9H9R9 158 aa3.41□□□□□ -1.86
SDHB-204ENST00000475049 NDUFA13Q9P0J0 144 aa3.41□□□□□ -1.86
SDHB-204ENST00000475049 THAP10Q9P2Z0 257 aaPredicted RBP3.41□□□□□ -1.86
SDHB-204ENST00000475049 KNSTRNQ9Y448 316 aa3.41□□□□□ -1.86
SDHB-204ENST00000475049 AUP1Q9Y679 476 aa3.41□□□□□ -1.86
SDHB-204ENST00000475049 IGHV3-38A0A0C4DH36 116 aa3.4□□□□□ -1.87
SDHB-204ENST00000475049 SRRM4A7MD48 611 aaKnown RBP3.4□□□□□ -1.87
SDHB-204ENST00000475049 NEDD8-MDP1E9PL57 170 aa3.4□□□□□ -1.87
SDHB-204ENST00000475049 VEGFDO43915 354 aa3.4□□□□□ -1.87
SDHB-204ENST00000475049 SNAP91O60641 907 aa3.4□□□□□ -1.87
SDHB-204ENST00000475049 ANXA9O76027 345 aa3.4□□□□□ -1.87
SDHB-204ENST00000475049 OLFM2O95897 454 aa3.4□□□□□ -1.87
SDHB-204ENST00000475049 GLI2P10070 1586 aa3.4□□□□□ -1.87
SDHB-204ENST00000475049 PCP11498 1178 aaKnown RBP3.4□□□□□ -1.87
SDHB-204ENST00000475049 AREGP15514 252 aa3.4□□□□□ -1.87
SDHB-204ENST00000475049 PPP2R1AP30153 589 aa3.4□□□□□ -1.87
SDHB-204ENST00000475049 NSFP46459 744 aaKnown RBP3.4□□□□□ -1.87
SDHB-204ENST00000475049 NDUFV3P56181 108 aaKnown RBP3.4□□□□□ -1.87
SDHB-204ENST00000475049 RPS27AP62979 156 aaKnown RBP3.4□□□□□ -1.87
SDHB-204ENST00000475049 SRPXP78539 464 aa3.4□□□□□ -1.87
SDHB-204ENST00000475049 PPP1R8Q12972 351 aaKnown RBP3.4□□□□□ -1.87
SDHB-204ENST00000475049 RAPSNQ13702 412 aa3.4□□□□□ -1.87
SDHB-204ENST00000475049 WSCD2Q2TBF2 565 aa3.4□□□□□ -1.87
SDHB-204ENST00000475049 C17orf64Q86WR6 236 aa3.4□□□□□ -1.87
SDHB-204ENST00000475049 CATSPER3Q86XQ3 398 aa3.4□□□□□ -1.87
SDHB-204ENST00000475049 KRTAP7-1Q8IUC3 87 aa3.4□□□□□ -1.87
SDHB-204ENST00000475049 ARL10Q8N8L6 244 aa3.4□□□□□ -1.87
SDHB-204ENST00000475049 ZNF485Q8NCK3 441 aa3.4□□□□□ -1.87
SDHB-204ENST00000475049 ICA1LQ8NDH6 482 aa3.4□□□□□ -1.87
SDHB-204ENST00000475049 OR4L1Q8NH43 312 aa3.4□□□□□ -1.87
SDHB-204ENST00000475049 PCNPQ8WW12 178 aaKnown RBP3.4□□□□□ -1.87
SDHB-204ENST00000475049 MRPL24Q96A35 216 aaKnown RBP3.4□□□□□ -1.87
SDHB-204ENST00000475049 ATP6V0BQ99437 205 aa3.4□□□□□ -1.87
SDHB-204ENST00000475049 NAP1L3Q99457 506 aaPredicted RBP3.4□□□□□ -1.87
SDHB-204ENST00000475049 CHCHD5Q9BSY4 110 aa3.4□□□□□ -1.87
SDHB-204ENST00000475049 FUNDC2Q9BWH2 189 aa3.4□□□□□ -1.87
SDHB-204ENST00000475049 NUSAP1Q9BXS6 441 aaKnown RBP3.4□□□□□ -1.87
SDHB-204ENST00000475049 GANQ9H2C0 597 aa3.4□□□□□ -1.87
SDHB-204ENST00000475049 MOB1AQ9H8S9 216 aa3.4□□□□□ -1.87
SDHB-204ENST00000475049 PANK3Q9H999 370 aa3.4□□□□□ -1.87
SDHB-204ENST00000475049 GDF3Q9NR23 364 aa3.4□□□□□ -1.87
SDHB-204ENST00000475049 DDX28Q9NUL7 540 aaKnown RBP3.4□□□□□ -1.87
SDHB-204ENST00000475049 HMG20BQ9P0W2 317 aa3.4□□□□□ -1.87
SDHB-204ENST00000475049 MOSPD1Q9UJG1 213 aa3.4□□□□□ -1.87
SDHB-204ENST00000475049 KIAA0556O60303 1618 aa3.4□□□□□ -1.87
SDHB-204ENST00000475049 ADCY10Q96PN6 1610 aa3.4□□□□□ -1.87
SDHB-204ENST00000475049 IGLV4-3A0A075B6K6 122 aa3.39□□□□□ -1.87
SDHB-204ENST00000475049 TRGV8A0A0C4DH27 118 aa3.39□□□□□ -1.87
SDHB-204ENST00000475049 TLR4O00206 839 aa3.39□□□□□ -1.87
SDHB-204ENST00000475049 EEF2KO00418 725 aaKnown RBP3.39□□□□□ -1.87
SDHB-204ENST00000475049 FBP2O00757 339 aa3.39□□□□□ -1.87
SDHB-204ENST00000475049 HPRP00739 348 aa3.39□□□□□ -1.87
SDHB-204ENST00000475049 MMP10P09238 476 aa3.39□□□□□ -1.87
SDHB-204ENST00000475049 CT45A8P0DMV1 189 aa3.39□□□□□ -1.87
SDHB-204ENST00000475049 CT45A9P0DMV2 189 aa3.39□□□□□ -1.87
SDHB-204ENST00000475049 CYP3A5P20815 502 aa3.39□□□□□ -1.87
SDHB-204ENST00000475049 GLRA1P23415 457 aa3.39□□□□□ -1.87
SDHB-204ENST00000475049 MARCKSP29966 332 aaPredicted RBP3.39□□□□□ -1.87
SDHB-204ENST00000475049 RIDAP52758 137 aaKnown RBP3.39□□□□□ -1.87
SDHB-204ENST00000475049 HERV-K104P63124 156 aa3.39□□□□□ -1.87
SDHB-204ENST00000475049 FCHO2Q0JRZ9 810 aa3.39□□□□□ -1.87
SDHB-204ENST00000475049 ENPP2Q13822 863 aa3.39□□□□□ -1.87
SDHB-204ENST00000475049 LY6DQ14210 128 aa3.39□□□□□ -1.87
SDHB-204ENST00000475049 OR1C1Q15619 314 aa3.39□□□□□ -1.87
SDHB-204ENST00000475049 CT45A2Q5DJT8 189 aa3.39□□□□□ -1.87
SDHB-204ENST00000475049 DCAF12Q5T6F0 453 aa3.39□□□□□ -1.87
SDHB-204ENST00000475049 DDI2Q5TDH0 399 aa3.39□□□□□ -1.87
SDHB-204ENST00000475049 RTL6Q6ICC9 239 aa3.39□□□□□ -1.87
SDHB-204ENST00000475049 PAQR6Q6TCH4 344 aa3.39□□□□□ -1.87
SDHB-204ENST00000475049 Q6ZRG5 221 aa3.39□□□□□ -1.87
SDHB-204ENST00000475049 BANPQ8N9N5 519 aa3.39□□□□□ -1.87
SDHB-204ENST00000475049 PRSS33Q8NF86 280 aa3.39□□□□□ -1.87
SDHB-204ENST00000475049 OR6M1Q8NGM8 313 aa3.39□□□□□ -1.87
SDHB-204ENST00000475049 ESAMQ96AP7 390 aa3.39□□□□□ -1.87
SDHB-204ENST00000475049 RPGRIP1Q96KN7 1286 aa3.39□□□□□ -1.87
SDHB-204ENST00000475049 ZNF597Q96LX8 424 aa3.39□□□□□ -1.87
SDHB-204ENST00000475049 SPATA13Q96N96 652 aa3.39□□□□□ -1.87
SDHB-204ENST00000475049 PRAM1Q96QH2 718 aa3.39□□□□□ -1.87
SDHB-204ENST00000475049 RAB40CQ96S21 281 aa3.39□□□□□ -1.87
SDHB-204ENST00000475049 RBM4BQ9BQ04 359 aaKnown RBP3.39□□□□□ -1.87
SDHB-204ENST00000475049 TEX13AQ9BXU3 409 aaPredicted RBP3.39□□□□□ -1.87
SDHB-204ENST00000475049 DDX47Q9H0S4 455 aaKnown RBP3.39□□□□□ -1.87
SDHB-204ENST00000475049 DEPPQ9NTK1 212 aa3.39□□□□□ -1.87
SDHB-204ENST00000475049 ACOXLQ9NUZ1 547 aa3.39□□□□□ -1.87
SDHB-204ENST00000475049 CYP39A1Q9NYL5 469 aa3.39□□□□□ -1.87
SDHB-204ENST00000475049 UBQLN2Q9UHD9 624 aa3.39□□□□□ -1.87
SDHB-204ENST00000475049 NARFQ9UHQ1 456 aa3.39□□□□□ -1.87
SDHB-204ENST00000475049 MGAT4AQ9UM21 535 aa3.39□□□□□ -1.87
SDHB-204ENST00000475049 NIP7Q9Y221 180 aaKnown RBP eCLIP3.39□□□□□ -1.87
SDHB-204ENST00000475049 NHSL1Q5SYE7 1610 aa3.38□□□□□ -1.87
SDHB-204ENST00000475049 A0A1B0GU03 582 aa3.38□□□□□ -1.87
SDHB-204ENST00000475049 LOC390937A0A1W2PQ73 354 aa3.38□□□□□ -1.87
SDHB-204ENST00000475049 SH3PXD2BA1X283 911 aa3.38□□□□□ -1.87
SDHB-204ENST00000475049 IGLON5A6NGN9 336 aa3.38□□□□□ -1.87
SDHB-204ENST00000475049 CCDC69A6NI79 296 aa3.38□□□□□ -1.87
SDHB-204ENST00000475049 YJEFN3A6XGL0 299 aa3.38□□□□□ -1.87
SDHB-204ENST00000475049 ARHGEF33A8MVX0 844 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms