RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 KCNC2Q96PR1 638 aa12.91□□□□□ -0.34
CCDC78-209ENST00000474647 TMEM79Q9BSE2 394 aa12.91□□□□□ -0.34
CCDC78-209ENST00000474647 DDX47Q9H0S4 455 aaKnown RBP12.91□□□□□ -0.34
CCDC78-209ENST00000474647 SLC6A15Q9H2J7 730 aa12.91□□□□□ -0.34
CCDC78-209ENST00000474647 ZNF703Q9H7S9 590 aaPredicted RBP12.91□□□□□ -0.34
CCDC78-209ENST00000474647 DNAJC11Q9NVH1 559 aa12.91□□□□□ -0.34
CCDC78-209ENST00000474647 BOKQ9UMX3 212 aaPredicted RBP12.91□□□□□ -0.34
CCDC78-209ENST00000474647 SPACA6W5XKT8 324 aa12.91□□□□□ -0.34
CCDC78-209ENST00000474647 NSD1Q96L73 2696 aaPredicted RBP12.9□□□□□ -0.34
CCDC78-209ENST00000474647 A6NNC1 897 aa12.9□□□□□ -0.34
CCDC78-209ENST00000474647 RTCAO00442 366 aaKnown RBP12.9□□□□□ -0.34
CCDC78-209ENST00000474647 DVL2O14641 736 aa12.9□□□□□ -0.34
CCDC78-209ENST00000474647 RFPL3SP0C7P2 107 aa12.9□□□□□ -0.34
CCDC78-209ENST00000474647 TACR1P25103 407 aa12.9□□□□□ -0.34
CCDC78-209ENST00000474647 HSPA7P48741 367 aa12.9□□□□□ -0.34
CCDC78-209ENST00000474647 TRPC1P48995 793 aa12.9□□□□□ -0.34
CCDC78-209ENST00000474647 ASCL1P50553 236 aa12.9□□□□□ -0.34
CCDC78-209ENST00000474647 WNT3P56703 355 aa12.9□□□□□ -0.34
CCDC78-209ENST00000474647 TAS2R39P59534 338 aa12.9□□□□□ -0.34
CCDC78-209ENST00000474647 TGFBIQ15582 683 aa12.9□□□□□ -0.34
CCDC78-209ENST00000474647 WHAMMP3Q1A5X7 153 aa12.9□□□□□ -0.34
CCDC78-209ENST00000474647 SLC22A10Q63ZE4 541 aa12.9□□□□□ -0.34
CCDC78-209ENST00000474647 ZNF572Q7Z3I7 529 aaPredicted RBP12.9□□□□□ -0.34
CCDC78-209ENST00000474647 ZC3HC1Q86WB0 502 aaKnown RBP12.9□□□□□ -0.34
CCDC78-209ENST00000474647 ANKMY2Q8IV38 441 aa12.9□□□□□ -0.34
CCDC78-209ENST00000474647 C9orf40Q8IXQ3 194 aa12.9□□□□□ -0.34
CCDC78-209ENST00000474647 RELL2Q8NC24 303 aaPredicted RBP12.9□□□□□ -0.34
CCDC78-209ENST00000474647 KIAA1191Q96A73 305 aa12.9□□□□□ -0.34
CCDC78-209ENST00000474647 ESAMQ96AP7 390 aa12.9□□□□□ -0.34
CCDC78-209ENST00000474647 PTCD3Q96EY7 689 aaKnown RBP12.9□□□□□ -0.34
CCDC78-209ENST00000474647 LRRC46Q96FV0 321 aa12.9□□□□□ -0.34
CCDC78-209ENST00000474647 DGAT2Q96PD7 388 aa12.9□□□□□ -0.34
CCDC78-209ENST00000474647 ALPK1Q96QP1 1244 aa12.9□□□□□ -0.34
CCDC78-209ENST00000474647 GAL3ST4Q96RP7 486 aa12.9□□□□□ -0.34
CCDC78-209ENST00000474647 CAPS2Q9BXY5 557 aa12.9□□□□□ -0.34
CCDC78-209ENST00000474647 PITHD1Q9GZP4 211 aaPredicted RBP12.9□□□□□ -0.34
CCDC78-209ENST00000474647 NT5DC2Q9H857 520 aa12.9□□□□□ -0.34
CCDC78-209ENST00000474647 CNOT10Q9H9A5 744 aaKnown RBP12.9□□□□□ -0.34
CCDC78-209ENST00000474647 LYRM4Q9HD34 91 aa12.9□□□□□ -0.34
CCDC78-209ENST00000474647 RRAGDQ9NQL2 400 aaPredicted RBP12.9□□□□□ -0.34
CCDC78-209ENST00000474647 PRDM7Q9NQW5 492 aa12.9□□□□□ -0.34
CCDC78-209ENST00000474647 GPRC5BQ9NZH0 403 aa12.9□□□□□ -0.34
CCDC78-209ENST00000474647 CBLCQ9ULV8 474 aa12.9□□□□□ -0.34
CCDC78-209ENST00000474647 MED12Q93074 2177 aa12.9□□□□□ -0.34
CCDC78-209ENST00000474647 HEATR5AQ86XA9 2040 aa12.89□□□□□ -0.35
CCDC78-209ENST00000474647 C15orf38-AP3S2A0A0A6YYH1 394 aa12.89□□□□□ -0.35
CCDC78-209ENST00000474647 HSPB2A8KAH6 182 aa12.89□□□□□ -0.35
CCDC78-209ENST00000474647 DYRK3O43781 588 aa12.89□□□□□ -0.35
CCDC78-209ENST00000474647 CPN2P22792 545 aa12.89□□□□□ -0.35
CCDC78-209ENST00000474647 GDF1P27539 372 aa12.89□□□□□ -0.35
CCDC78-209ENST00000474647 PEX19P40855 299 aa12.89□□□□□ -0.35
CCDC78-209ENST00000474647 MSH2P43246 934 aa12.89□□□□□ -0.35
CCDC78-209ENST00000474647 SLC12A2P55011 1212 aa12.89□□□□□ -0.35
CCDC78-209ENST00000474647 CKAP4Q07065 602 aaKnown RBP12.89□□□□□ -0.35
CCDC78-209ENST00000474647 DOC2AQ14183 400 aa12.89□□□□□ -0.35
CCDC78-209ENST00000474647 HSPB2Q16082 182 aa12.89□□□□□ -0.35
CCDC78-209ENST00000474647 PAMR1Q6UXH9 720 aa12.89□□□□□ -0.35
CCDC78-209ENST00000474647 ZNF793Q6ZN11 406 aa12.89□□□□□ -0.35
CCDC78-209ENST00000474647 OR4N5Q8IXE1 308 aa12.89□□□□□ -0.35
CCDC78-209ENST00000474647 ULK2Q8IYT8 1036 aa12.89□□□□□ -0.35
CCDC78-209ENST00000474647 FBXW8Q8N3Y1 598 aa12.89□□□□□ -0.35
CCDC78-209ENST00000474647 NAXEQ8NCW5 288 aa12.89□□□□□ -0.35
CCDC78-209ENST00000474647 EXT2Q93063 718 aa12.89□□□□□ -0.35
CCDC78-209ENST00000474647 SPACA9Q96E40 222 aaPredicted RBP12.89□□□□□ -0.35
CCDC78-209ENST00000474647 VPS39Q96JC1 886 aa12.89□□□□□ -0.35
CCDC78-209ENST00000474647 KRT12Q99456 494 aa12.89□□□□□ -0.35
CCDC78-209ENST00000474647 WDR83Q9BRX9 315 aaKnown RBP12.89□□□□□ -0.35
CCDC78-209ENST00000474647 ROGDIQ9GZN7 287 aa12.89□□□□□ -0.35
CCDC78-209ENST00000474647 ZNF490Q9ULM2 529 aaPredicted RBP12.89□□□□□ -0.35
CCDC78-209ENST00000474647 CCDC188H7C350 402 aa12.88□□□□□ -0.35
CCDC78-209ENST00000474647 HRKO00198 91 aa12.88□□□□□ -0.35
CCDC78-209ENST00000474647 SAP18O00422 153 aaKnown RBP12.88□□□□□ -0.35
CCDC78-209ENST00000474647 TAPBPO15533 448 aa12.88□□□□□ -0.35
CCDC78-209ENST00000474647 FGF17O60258 216 aa12.88□□□□□ -0.35
CCDC78-209ENST00000474647 CCNT2O60583 730 aaKnown RBP12.88□□□□□ -0.35
CCDC78-209ENST00000474647 PRAMEF4O60810 478 aa12.88□□□□□ -0.35
CCDC78-209ENST00000474647 FAM155BO75949 473 aa12.88□□□□□ -0.35
CCDC78-209ENST00000474647 PCNAP12004 261 aa12.88□□□□□ -0.35
CCDC78-209ENST00000474647 CD22P20273 847 aa12.88□□□□□ -0.35
CCDC78-209ENST00000474647 ATP5A1P25705 553 aaKnown RBP12.88□□□□□ -0.35
CCDC78-209ENST00000474647 SSR2P43308 183 aa12.88□□□□□ -0.35
CCDC78-209ENST00000474647 ADAM8P78325 824 aa12.88□□□□□ -0.35
CCDC78-209ENST00000474647 MGAT5Q09328 741 aa12.88□□□□□ -0.35
CCDC78-209ENST00000474647 PDK4Q16654 411 aa12.88□□□□□ -0.35
CCDC78-209ENST00000474647 HIST2H2ACQ16777 129 aaPredicted RBP12.88□□□□□ -0.35
CCDC78-209ENST00000474647 MPEG1Q2M385 716 aa12.88□□□□□ -0.35
CCDC78-209ENST00000474647 ZNF791Q3KP31 576 aaPredicted RBP12.88□□□□□ -0.35
CCDC78-209ENST00000474647 PIGGQ5H8A4 983 aa12.88□□□□□ -0.35
CCDC78-209ENST00000474647 PAGE2BQ5JRK9 111 aa12.88□□□□□ -0.35
CCDC78-209ENST00000474647 PRAMEF9Q5VWM5 478 aa12.88□□□□□ -0.35
CCDC78-209ENST00000474647 STEAP4Q687X5 459 aa12.88□□□□□ -0.35
CCDC78-209ENST00000474647 HIST2H2AA3Q6FI13 130 aa12.88□□□□□ -0.35
CCDC78-209ENST00000474647 ADGRD1Q6QNK2 874 aa12.88□□□□□ -0.35
CCDC78-209ENST00000474647 TCAIMQ8N3R3 496 aa12.88□□□□□ -0.35
CCDC78-209ENST00000474647 SPATA6LQ8N4H0 392 aa12.88□□□□□ -0.35
CCDC78-209ENST00000474647 ACOT4Q8N9L9 421 aa12.88□□□□□ -0.35
CCDC78-209ENST00000474647 SRFBP1Q8NEF9 429 aaKnown RBP12.88□□□□□ -0.35
CCDC78-209ENST00000474647 TNIP2Q8NFZ5 429 aa12.88□□□□□ -0.35
CCDC78-209ENST00000474647 OR10G3Q8NGC4 313 aa12.88□□□□□ -0.35
CCDC78-209ENST00000474647 NEIL3Q8TAT5 605 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms