RNA–Protein interactions for RNA: ENST00000474543.5

NELFCD-204, Transcript of negative elongation factor complex member C/D, human

TSL 5

Gene NELFCD, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NELFCD-204	ENST00000474543	CCDC32	Q9BV29	185 aa		13.73	□□□□□ -0.21
NELFCD-204	ENST00000474543	SLC46A2	Q9BY10	475 aa		13.73	□□□□□ -0.21
NELFCD-204	ENST00000474543	SLC25A19	Q9HC21	320 aa		13.73	□□□□□ -0.21
NELFCD-204	ENST00000474543	MOV10	Q9HCE1	1003 aa	Known RBP	13.73	□□□□□ -0.21
NELFCD-204	ENST00000474543	C14orf119	Q9NWQ9	140 aa		13.73	□□□□□ -0.21
NELFCD-204	ENST00000474543	ANGPT4	Q9Y264	503 aa		13.73	□□□□□ -0.21
NELFCD-204	ENST00000474543		A0A1W2PRB8	838 aa		13.73	□□□□□ -0.21
NELFCD-204	ENST00000474543	PIPSL	A2A3N6	862 aa		13.73	□□□□□ -0.21
NELFCD-204	ENST00000474543	FFAR1	O14842	300 aa		13.73	□□□□□ -0.21
NELFCD-204	ENST00000474543	KRT75	O95678	551 aa		13.73	□□□□□ -0.21
NELFCD-204	ENST00000474543	IFNW1	P05000	195 aa		13.73	□□□□□ -0.21
NELFCD-204	ENST00000474543	C1GALT1C1L	P0DN25	315 aa		13.73	□□□□□ -0.21
NELFCD-204	ENST00000474543	PIP	P12273	146 aa	Predicted RBP	13.73	□□□□□ -0.21
NELFCD-204	ENST00000474543	TNFSF8	P32971	234 aa		13.73	□□□□□ -0.21
NELFCD-204	ENST00000474543	SOAT1	P35610	550 aa		13.73	□□□□□ -0.21
NELFCD-204	ENST00000474543	RPL3	P39023	403 aa	Known RBP	13.73	□□□□□ -0.21
NELFCD-204	ENST00000474543	ALDH9A1	P49189	494 aa		13.73	□□□□□ -0.21
NELFCD-204	ENST00000474543	LIM2	P55344	173 aa		13.73	□□□□□ -0.21
NELFCD-204	ENST00000474543	PUM1	Q14671	1186 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
NELFCD-204	ENST00000474543	ZNF284	Q2VY69	593 aa		13.73	□□□□□ -0.21
NELFCD-204	ENST00000474543	ARSI	Q5FYB1	569 aa		13.73	□□□□□ -0.21
NELFCD-204	ENST00000474543	AGAP6	Q5VW22	663 aa		13.73	□□□□□ -0.21
NELFCD-204	ENST00000474543	TECPR1	Q7Z6L1	1165 aa		13.73	□□□□□ -0.21
NELFCD-204	ENST00000474543	FAM46D	Q8NEK8	389 aa		13.73	□□□□□ -0.21
NELFCD-204	ENST00000474543	ZNF707	Q96C28	371 aa	Predicted RBP	13.73	□□□□□ -0.21
NELFCD-204	ENST00000474543	CEP19	Q96LK0	163 aa		13.73	□□□□□ -0.21
NELFCD-204	ENST00000474543	AGAP4	Q96P64	663 aa		13.73	□□□□□ -0.21
NELFCD-204	ENST00000474543	IL4I1	Q96RQ9	567 aa		13.73	□□□□□ -0.21
NELFCD-204	ENST00000474543	EFCAB11	Q9BUY7	163 aa		13.73	□□□□□ -0.21
NELFCD-204	ENST00000474543	SPNS1	Q9H2V7	528 aa		13.73	□□□□□ -0.21
NELFCD-204	ENST00000474543	HHATL	Q9HCP6	504 aa		13.73	□□□□□ -0.21
NELFCD-204	ENST00000474543	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	13.73	□□□□□ -0.21
NELFCD-204	ENST00000474543	GULP1	Q9UBP9	304 aa		13.73	□□□□□ -0.21
NELFCD-204	ENST00000474543	KCND3	Q9UK17	655 aa		13.73	□□□□□ -0.21
NELFCD-204	ENST00000474543	CCL26	Q9Y258	94 aa		13.73	□□□□□ -0.21
NELFCD-204	ENST00000474543	TRAPPC4	Q9Y296	219 aa		13.73	□□□□□ -0.21
NELFCD-204	ENST00000474543	TRBV4-1	A0A0J9YWV2	114 aa		13.72	□□□□□ -0.21
NELFCD-204	ENST00000474543	TTC36	A6NLP5	189 aa		13.72	□□□□□ -0.21
NELFCD-204	ENST00000474543	PDZK1P1	A8MUH7	402 aa		13.72	□□□□□ -0.21
NELFCD-204	ENST00000474543	NEDD8-MDP1	E9PL57	170 aa		13.72	□□□□□ -0.21
NELFCD-204	ENST00000474543		H3BM21	787 aa		13.72	□□□□□ -0.21
NELFCD-204	ENST00000474543	ENTPD6	O75354	484 aa		13.72	□□□□□ -0.21
NELFCD-204	ENST00000474543	KLK1	P06870	262 aa		13.72	□□□□□ -0.21
NELFCD-204	ENST00000474543	CD72	P21854	359 aa		13.72	□□□□□ -0.21
NELFCD-204	ENST00000474543	MAPK9	P45984	424 aa		13.72	□□□□□ -0.21
NELFCD-204	ENST00000474543	RECQL	P46063	649 aa	Predicted RBP	13.72	□□□□□ -0.21
NELFCD-204	ENST00000474543	DSTN	P60981	165 aa		13.72	□□□□□ -0.21
NELFCD-204	ENST00000474543	MEF2A	Q02078	507 aa	Predicted RBP	13.72	□□□□□ -0.21
NELFCD-204	ENST00000474543	RHAG	Q02094	409 aa		13.72	□□□□□ -0.21
NELFCD-204	ENST00000474543	C1QTNF12	Q5T7M4	302 aa		13.72	□□□□□ -0.21
NELFCD-204	ENST00000474543	ADIPOR2	Q86V24	386 aa		13.72	□□□□□ -0.21
NELFCD-204	ENST00000474543	TAGAP	Q8N103	731 aa		13.72	□□□□□ -0.21
NELFCD-204	ENST00000474543	FLCN	Q8NFG4	579 aa		13.72	□□□□□ -0.21
NELFCD-204	ENST00000474543	APOBEC4	Q8WW27	367 aa	Known RBP	13.72	□□□□□ -0.21
NELFCD-204	ENST00000474543	CAPSL	Q8WWF8	208 aa		13.72	□□□□□ -0.21
NELFCD-204	ENST00000474543	MTERF3	Q96E29	417 aa		13.72	□□□□□ -0.21
NELFCD-204	ENST00000474543	CNPPD1	Q9BV87	410 aa		13.72	□□□□□ -0.21
NELFCD-204	ENST00000474543	C3orf14	Q9HBI5	128 aa		13.72	□□□□□ -0.21
NELFCD-204	ENST00000474543	NEK6	Q9HC98	313 aa		13.72	□□□□□ -0.21
NELFCD-204	ENST00000474543	FZD3	Q9NPG1	666 aa		13.72	□□□□□ -0.21
NELFCD-204	ENST00000474543	CRNN	Q9UBG3	495 aa	Predicted RBP	13.72	□□□□□ -0.21
NELFCD-204	ENST00000474543	REV1	Q9UBZ9	1251 aa		13.72	□□□□□ -0.21
NELFCD-204	ENST00000474543	TBC1D24	Q9ULP9	559 aa		13.72	□□□□□ -0.21
NELFCD-204	ENST00000474543	LSM2	Q9Y333	95 aa	Known RBP	13.72	□□□□□ -0.21
NELFCD-204	ENST00000474543	DYRK1B	Q9Y463	629 aa		13.72	□□□□□ -0.21
NELFCD-204	ENST00000474543		A0A0C4DFX4	3053 aa		13.72	□□□□□ -0.21
NELFCD-204	ENST00000474543	C2orf16	Q68DN1	1984 aa		13.72	□□□□□ -0.21
NELFCD-204	ENST00000474543	TLR4	O00206	839 aa		13.71	□□□□□ -0.21
NELFCD-204	ENST00000474543	CCNK	O75909	580 aa		13.71	□□□□□ -0.21
NELFCD-204	ENST00000474543	SCG5	P05408	212 aa		13.71	□□□□□ -0.21
NELFCD-204	ENST00000474543	IL9	P15248	144 aa		13.71	□□□□□ -0.21
NELFCD-204	ENST00000474543	TIE1	P35590	1138 aa		13.71	□□□□□ -0.21
NELFCD-204	ENST00000474543	RPS19	P39019	145 aa	Known RBP	13.71	□□□□□ -0.21
NELFCD-204	ENST00000474543	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
NELFCD-204	ENST00000474543	ZNF658B	Q4V348	819 aa	Predicted RBP	13.71	□□□□□ -0.21
NELFCD-204	ENST00000474543	GRASP	Q7Z6J2	395 aa	Predicted RBP	13.71	□□□□□ -0.21
NELFCD-204	ENST00000474543	MMP21	Q8N119	569 aa		13.71	□□□□□ -0.21
NELFCD-204	ENST00000474543	FBXO15	Q8NCQ5	510 aa	Predicted RBP	13.71	□□□□□ -0.21
NELFCD-204	ENST00000474543	NECTIN4	Q96NY8	510 aa		13.71	□□□□□ -0.21
NELFCD-204	ENST00000474543	SGPP1	Q9BX95	441 aa		13.71	□□□□□ -0.21
NELFCD-204	ENST00000474543	ASPN	Q9BXN1	380 aa		13.71	□□□□□ -0.21
NELFCD-204	ENST00000474543	SLC6A16	Q9GZN6	736 aa		13.71	□□□□□ -0.21
NELFCD-204	ENST00000474543	TP63	Q9H3D4	680 aa	Predicted RBP	13.71	□□□□□ -0.21
NELFCD-204	ENST00000474543	SMURF1	Q9HCE7	757 aa		13.71	□□□□□ -0.21
NELFCD-204	ENST00000474543	C11orf16	Q9NQ32	467 aa		13.71	□□□□□ -0.21
NELFCD-204	ENST00000474543	CLEC2D	Q9UHP7	191 aa		13.71	□□□□□ -0.21
NELFCD-204	ENST00000474543	SLITRK5	O94991	958 aa		13.71	□□□□□ -0.22
NELFCD-204	ENST00000474543	CTSL	P07711	333 aa		13.71	□□□□□ -0.22
NELFCD-204	ENST00000474543	IL3	P08700	152 aa		13.71	□□□□□ -0.22
NELFCD-204	ENST00000474543	CKMT1A	P12532	417 aa		13.71	□□□□□ -0.22
NELFCD-204	ENST00000474543	PTPN2	P17706	415 aa		13.71	□□□□□ -0.22
NELFCD-204	ENST00000474543	CSTF2	P33240	577 aa	Known RBP eCLIP	13.71	□□□□□ -0.22
NELFCD-204	ENST00000474543	COPZ1	P61923	177 aa		13.71	□□□□□ -0.22
NELFCD-204	ENST00000474543	SNRPG	P62308	76 aa	Known RBP	13.71	□□□□□ -0.22
NELFCD-204	ENST00000474543	BCL7A	Q4VC05	210 aa		13.71	□□□□□ -0.22
NELFCD-204	ENST00000474543	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	13.71	□□□□□ -0.22
NELFCD-204	ENST00000474543	RSBN1	Q5VWQ0	802 aa	Predicted RBP	13.71	□□□□□ -0.22
NELFCD-204	ENST00000474543	TMEM215	Q68D42	235 aa		13.71	□□□□□ -0.22
NELFCD-204	ENST00000474543	HIST2H2AA3	Q6FI13	130 aa		13.71	□□□□□ -0.22
NELFCD-204	ENST00000474543	REEP3	Q6NUK4	255 aa		13.71	□□□□□ -0.22

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