RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 DMRTA2Q96SC8 542 aa18.88■□□□□ 0.61
PDLIM4-206ENST00000474421 MTERF1Q99551 399 aaKnown RBP18.88■□□□□ 0.61
PDLIM4-206ENST00000474421 LRRC1Q9BTT6 524 aa18.88■□□□□ 0.61
PDLIM4-206ENST00000474421 ACSS3Q9H6R3 686 aa18.88■□□□□ 0.61
PDLIM4-206ENST00000474421 PLSCR2Q9NRY7 297 aa18.88■□□□□ 0.61
PDLIM4-206ENST00000474421 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.88■□□□□ 0.61
PDLIM4-206ENST00000474421 PSD3Q9NYI0 1048 aa18.88■□□□□ 0.61
PDLIM4-206ENST00000474421 COQ3Q9NZJ6 369 aa18.88■□□□□ 0.61
PDLIM4-206ENST00000474421 PPT2Q9UMR5 302 aa18.88■□□□□ 0.61
PDLIM4-206ENST00000474421 DNAJC13O75165 2243 aa18.88■□□□□ 0.61
PDLIM4-206ENST00000474421 FGF17O60258 216 aa18.87■□□□□ 0.61
PDLIM4-206ENST00000474421 ETHE1O95571 254 aa18.87■□□□□ 0.61
PDLIM4-206ENST00000474421 TPOP07202 933 aa18.87■□□□□ 0.61
PDLIM4-206ENST00000474421 TNFRSF17Q02223 184 aa18.87■□□□□ 0.61
PDLIM4-206ENST00000474421 GTF2H2Q13888 395 aa18.87■□□□□ 0.61
PDLIM4-206ENST00000474421 WHAMMP3Q1A5X7 153 aa18.87■□□□□ 0.61
PDLIM4-206ENST00000474421 MPEG1Q2M385 716 aa18.87■□□□□ 0.61
PDLIM4-206ENST00000474421 NDUFAF5Q5TEU4 345 aa18.87■□□□□ 0.61
PDLIM4-206ENST00000474421 TMEM211Q6ICI0 200 aa18.87■□□□□ 0.61
PDLIM4-206ENST00000474421 GTF2H2CQ6P1K8 395 aa18.87■□□□□ 0.61
PDLIM4-206ENST00000474421 SLC22A16Q86VW1 577 aa18.87■□□□□ 0.61
PDLIM4-206ENST00000474421 ZNF321PQ8N8H1 164 aa18.87■□□□□ 0.61
PDLIM4-206ENST00000474421 OR2M7Q8NG81 312 aa18.87■□□□□ 0.61
PDLIM4-206ENST00000474421 NUBPLQ8TB37 319 aa18.87■□□□□ 0.61
PDLIM4-206ENST00000474421 ZNF721Q8TF20 911 aa18.87■□□□□ 0.61
PDLIM4-206ENST00000474421 FAM173AQ9BQD7 235 aa18.87■□□□□ 0.61
PDLIM4-206ENST00000474421 PELOQ9BRX2 385 aaKnown RBP18.87■□□□□ 0.61
PDLIM4-206ENST00000474421 ZNF407Q9C0G0 2248 aa18.87■□□□□ 0.61
PDLIM4-206ENST00000474421 DEPPQ9NTK1 212 aa18.87■□□□□ 0.61
PDLIM4-206ENST00000474421 LYARQ9NX58 379 aaKnown RBP18.87■□□□□ 0.61
PDLIM4-206ENST00000474421 CPSF2Q9P2I0 782 aaKnown RBP18.87■□□□□ 0.61
PDLIM4-206ENST00000474421 TMCO1Q9UM00 188 aa18.87■□□□□ 0.61
PDLIM4-206ENST00000474421 PLPP1O14494 284 aa18.86■□□□□ 0.61
PDLIM4-206ENST00000474421 ADAM10O14672 748 aa18.86■□□□□ 0.61
PDLIM4-206ENST00000474421 ZNHIT1O43257 154 aa18.86■□□□□ 0.61
PDLIM4-206ENST00000474421 ALDOAP04075 364 aaKnown RBP18.86■□□□□ 0.61
PDLIM4-206ENST00000474421 CNR1P21554 472 aa18.86■□□□□ 0.61
PDLIM4-206ENST00000474421 RPS13P62277 151 aaKnown RBP18.86■□□□□ 0.61
PDLIM4-206ENST00000474421 PPIAP62937 165 aaKnown RBP18.86■□□□□ 0.61
PDLIM4-206ENST00000474421 CUL3Q13618 768 aa18.86■□□□□ 0.61
PDLIM4-206ENST00000474421 TAOK1Q7L7X3 1001 aa18.86■□□□□ 0.61
PDLIM4-206ENST00000474421 GOLGA7Q7Z5G4 137 aa18.86■□□□□ 0.61
PDLIM4-206ENST00000474421 CD163Q86VB7 1156 aa18.86■□□□□ 0.61
PDLIM4-206ENST00000474421 L3MBTL4Q8NA19 623 aa18.86■□□□□ 0.61
PDLIM4-206ENST00000474421 OR52N2Q8NGI0 321 aa18.86■□□□□ 0.61
PDLIM4-206ENST00000474421 SENP5Q96HI0 755 aaPredicted RBP18.86■□□□□ 0.61
PDLIM4-206ENST00000474421 SCYL1Q96KG9 808 aa18.86■□□□□ 0.61
PDLIM4-206ENST00000474421 GPR78Q96P69 363 aa18.86■□□□□ 0.61
PDLIM4-206ENST00000474421 SORBS1Q9BX66 1292 aaKnown RBP18.86■□□□□ 0.61
PDLIM4-206ENST00000474421 VPS11Q9H270 941 aa18.86■□□□□ 0.61
PDLIM4-206ENST00000474421 TP63Q9H3D4 680 aaPredicted RBP18.86■□□□□ 0.61
PDLIM4-206ENST00000474421 IPPKQ9H8X2 491 aa18.86■□□□□ 0.61
PDLIM4-206ENST00000474421 NINJ2Q9NZG7 142 aa18.86■□□□□ 0.61
PDLIM4-206ENST00000474421 IKBKGQ9Y6K9 419 aa18.86■□□□□ 0.61
PDLIM4-206ENST00000474421 EML6Q6ZMW3 1958 aa18.86■□□□□ 0.61
PDLIM4-206ENST00000474421 FOXE1O00358 373 aaPredicted RBP18.85■□□□□ 0.61
PDLIM4-206ENST00000474421 URI1O94763 535 aaPredicted RBP18.85■□□□□ 0.61
PDLIM4-206ENST00000474421 P04436 131 aa18.85■□□□□ 0.61
PDLIM4-206ENST00000474421 INHBAP08476 426 aa18.85■□□□□ 0.61
PDLIM4-206ENST00000474421 RBP1P09455 135 aa18.85■□□□□ 0.61
PDLIM4-206ENST00000474421 ALOX15P16050 662 aaPredicted RBP18.85■□□□□ 0.61
PDLIM4-206ENST00000474421 FOLH1Q04609 750 aa18.85■□□□□ 0.61
PDLIM4-206ENST00000474421 TBL3Q12788 808 aaKnown RBP18.85■□□□□ 0.61
PDLIM4-206ENST00000474421 CPSF6Q16630 551 aaKnown RBP eCLIP18.85■□□□□ 0.61
PDLIM4-206ENST00000474421 PIGGQ5H8A4 983 aa18.85■□□□□ 0.61
PDLIM4-206ENST00000474421 CYP20A1Q6UW02 462 aa18.85■□□□□ 0.61
PDLIM4-206ENST00000474421 C3P1Q6ZMU1 363 aa18.85■□□□□ 0.61
PDLIM4-206ENST00000474421 OR4N5Q8IXE1 308 aa18.85■□□□□ 0.61
PDLIM4-206ENST00000474421 ST13P4Q8IZP2 240 aaPredicted RBP18.85■□□□□ 0.61
PDLIM4-206ENST00000474421 RNF175Q8N4F7 328 aa18.85■□□□□ 0.61
PDLIM4-206ENST00000474421 SLC22A8Q8TCC7 542 aa18.85■□□□□ 0.61
PDLIM4-206ENST00000474421 CA5BP1Q8WTZ4 195 aa18.85■□□□□ 0.61
PDLIM4-206ENST00000474421 FBXL20Q96IG2 436 aa18.85■□□□□ 0.61
PDLIM4-206ENST00000474421 FUT8Q9BYC5 575 aa18.85■□□□□ 0.61
PDLIM4-206ENST00000474421 DDX31Q9H8H2 851 aaKnown RBP18.85■□□□□ 0.61
PDLIM4-206ENST00000474421 ZDHHC11Q9H8X9 412 aa18.85■□□□□ 0.61
PDLIM4-206ENST00000474421 WDR41Q9HAD4 459 aa18.85■□□□□ 0.61
PDLIM4-206ENST00000474421 SACM1LQ9NTJ5 587 aa18.85■□□□□ 0.61
PDLIM4-206ENST00000474421 ATG4BQ9Y4P1 393 aa18.85■□□□□ 0.61
PDLIM4-206ENST00000474421 ADGRG4Q8IZF6 3080 aa18.84■□□□□ 0.61
PDLIM4-206ENST00000474421 PROM1O43490 865 aa18.84■□□□□ 0.61
PDLIM4-206ENST00000474421 CLDN9O95484 217 aa18.84■□□□□ 0.61
PDLIM4-206ENST00000474421 IGKV3-11P04433 115 aa18.84■□□□□ 0.61
PDLIM4-206ENST00000474421 SNRPB2P08579 225 aaKnown RBP18.84■□□□□ 0.61
PDLIM4-206ENST00000474421 SERPINB9P50453 376 aa18.84■□□□□ 0.61
PDLIM4-206ENST00000474421 HNRNPH2P55795 449 aaKnown RBP18.84■□□□□ 0.61
PDLIM4-206ENST00000474421 ZNF750Q32MQ0 723 aa18.84■□□□□ 0.61
PDLIM4-206ENST00000474421 TECRLQ5HYJ1 363 aa18.84■□□□□ 0.61
PDLIM4-206ENST00000474421 C10orf62Q5T681 223 aaPredicted RBP18.84■□□□□ 0.61
PDLIM4-206ENST00000474421 C18orf63Q68DL7 685 aa18.84■□□□□ 0.61
PDLIM4-206ENST00000474421 DND1Q8IYX4 353 aaKnown RBP18.84■□□□□ 0.61
PDLIM4-206ENST00000474421 SLC15A4Q8N697 577 aa18.84■□□□□ 0.61
PDLIM4-206ENST00000474421 SLC44A1Q8WWI5 657 aa18.84■□□□□ 0.61
PDLIM4-206ENST00000474421 SREK1Q8WXA9 508 aaKnown RBP18.84■□□□□ 0.61
PDLIM4-206ENST00000474421 ATP6V1E2Q96A05 226 aa18.84■□□□□ 0.61
PDLIM4-206ENST00000474421 SDCCAG3Q96C92 435 aa18.84■□□□□ 0.61
PDLIM4-206ENST00000474421 TTTY12Q9BZ98 90 aa18.84■□□□□ 0.61
PDLIM4-206ENST00000474421 DEFB127Q9H1M4 99 aa18.84■□□□□ 0.61
PDLIM4-206ENST00000474421 IL1RL2Q9HB29 575 aa18.84■□□□□ 0.61
PDLIM4-206ENST00000474421 CSMD1Q96PZ7 3565 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms