RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 BUD31P41223 144 aaPredicted RBP17.65■□□□□ 0.42
PTCD3-210ENST00000473829 HMGCS1Q01581 520 aa17.65■□□□□ 0.42
PTCD3-210ENST00000473829 CSTF3Q12996 717 aaKnown RBP17.65■□□□□ 0.42
PTCD3-210ENST00000473829 SERTAD2Q14140 314 aa17.65■□□□□ 0.42
PTCD3-210ENST00000473829 CFAP157Q5JU67 520 aa17.65■□□□□ 0.42
PTCD3-210ENST00000473829 MMP21Q8N119 569 aa17.65■□□□□ 0.42
PTCD3-210ENST00000473829 C1orf52Q8N6N3 182 aaKnown RBP17.65■□□□□ 0.42
PTCD3-210ENST00000473829 OR1N1Q8NGS0 311 aa17.65■□□□□ 0.42
PTCD3-210ENST00000473829 TANKQ92844 425 aa17.65■□□□□ 0.42
PTCD3-210ENST00000473829 VMP1Q96GC9 406 aa17.65■□□□□ 0.42
PTCD3-210ENST00000473829 SIGLEC12Q96PQ1 595 aa17.65■□□□□ 0.42
PTCD3-210ENST00000473829 SMC6Q96SB8 1091 aa17.65■□□□□ 0.42
PTCD3-210ENST00000473829 GATA5Q9BWX5 397 aaPredicted RBP17.65■□□□□ 0.42
PTCD3-210ENST00000473829 MAP10Q9P2G4 905 aa17.65■□□□□ 0.42
PTCD3-210ENST00000473829 MID2Q9UJV3 735 aa17.65■□□□□ 0.42
PTCD3-210ENST00000473829 SYNDIG1LA6NDD5 238 aa17.64■□□□□ 0.41
PTCD3-210ENST00000473829 GABRR3A8MPY1 467 aa17.64■□□□□ 0.41
PTCD3-210ENST00000473829 C17orf105B2RV13 164 aa17.64■□□□□ 0.41
PTCD3-210ENST00000473829 PGRMC2O15173 223 aa17.64■□□□□ 0.41
PTCD3-210ENST00000473829 TYROBPO43914 113 aa17.64■□□□□ 0.41
PTCD3-210ENST00000473829 ULK1O75385 1050 aa17.64■□□□□ 0.41
PTCD3-210ENST00000473829 DDAH2O95865 285 aa17.64■□□□□ 0.41
PTCD3-210ENST00000473829 TLX1P31314 330 aaPredicted RBP17.64■□□□□ 0.41
PTCD3-210ENST00000473829 STT3AP46977 705 aa17.64■□□□□ 0.41
PTCD3-210ENST00000473829 UQCRFS1P47985 274 aa17.64■□□□□ 0.41
PTCD3-210ENST00000473829 CLCN2P51788 898 aa17.64■□□□□ 0.41
PTCD3-210ENST00000473829 MLF1P58340 268 aa17.64■□□□□ 0.41
PTCD3-210ENST00000473829 TUBA3CQ13748 450 aa17.64■□□□□ 0.41
PTCD3-210ENST00000473829 CCNYL2Q5T2Q4 361 aa17.64■□□□□ 0.41
PTCD3-210ENST00000473829 ZNF468Q5VIY5 522 aaPredicted RBP17.64■□□□□ 0.41
PTCD3-210ENST00000473829 TUBA3EQ6PEY2 450 aa17.64■□□□□ 0.41
PTCD3-210ENST00000473829 PAGE2Q7Z2X7 111 aa17.64■□□□□ 0.41
PTCD3-210ENST00000473829 RPS19BP1Q86WX3 136 aaKnown RBP17.64■□□□□ 0.41
PTCD3-210ENST00000473829 LGI4Q8N135 537 aa17.64■□□□□ 0.41
PTCD3-210ENST00000473829 TMEM132CQ8N3T6 1108 aa17.64■□□□□ 0.41
PTCD3-210ENST00000473829 THAP3Q8WTV1 239 aaPredicted RBP17.64■□□□□ 0.41
PTCD3-210ENST00000473829 SREK1Q8WXA9 508 aaKnown RBP17.64■□□□□ 0.41
PTCD3-210ENST00000473829 PPWD1Q96BP3 646 aaKnown RBP17.64■□□□□ 0.41
PTCD3-210ENST00000473829 DEFB126Q9BYW3 111 aa17.64■□□□□ 0.41
PTCD3-210ENST00000473829 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.64■□□□□ 0.41
PTCD3-210ENST00000473829 AHSPQ9NZD4 102 aa17.64■□□□□ 0.41
PTCD3-210ENST00000473829 VPS29Q9UBQ0 182 aa17.64■□□□□ 0.41
PTCD3-210ENST00000473829 CLCA3PQ9Y6N3 262 aa17.64■□□□□ 0.41
PTCD3-210ENST00000473829 MYO18BQ8IUG5 2567 aa17.64■□□□□ 0.41
PTCD3-210ENST00000473829 TRAV17A0A0B4J275 112 aa17.63■□□□□ 0.41
PTCD3-210ENST00000473829 HRKO00198 91 aa17.63■□□□□ 0.41
PTCD3-210ENST00000473829 SERPINB3P29508 390 aa17.63■□□□□ 0.41
PTCD3-210ENST00000473829 CD96P40200 585 aa17.63■□□□□ 0.41
PTCD3-210ENST00000473829 MAPK12P53778 367 aa17.63■□□□□ 0.41
PTCD3-210ENST00000473829 NAA20P61599 178 aa17.63■□□□□ 0.41
PTCD3-210ENST00000473829 RAE1P78406 368 aaKnown RBP17.63■□□□□ 0.41
PTCD3-210ENST00000473829 NDUFAF5Q5TEU4 345 aa17.63■□□□□ 0.41
PTCD3-210ENST00000473829 OR52E8Q6IFG1 317 aa17.63■□□□□ 0.41
PTCD3-210ENST00000473829 C16orf47Q6ZP98 133 aaPredicted RBP17.63■□□□□ 0.41
PTCD3-210ENST00000473829 ARMC10Q8N2F6 343 aa17.63■□□□□ 0.41
PTCD3-210ENST00000473829 MORN4Q8NDC4 146 aa17.63■□□□□ 0.41
PTCD3-210ENST00000473829 MDS2Q8NDY4 140 aa17.63■□□□□ 0.41
PTCD3-210ENST00000473829 OR14A16Q8NHC5 309 aa17.63■□□□□ 0.41
PTCD3-210ENST00000473829 SLC2A12Q8TD20 617 aa17.63■□□□□ 0.41
PTCD3-210ENST00000473829 DOK4Q8TEW6 326 aa17.63■□□□□ 0.41
PTCD3-210ENST00000473829 CHTF18Q8WVB6 975 aa17.63■□□□□ 0.41
PTCD3-210ENST00000473829 DAZLQ92904 295 aaKnown RBP17.63■□□□□ 0.41
PTCD3-210ENST00000473829 APIPQ96GX9 242 aa17.63■□□□□ 0.41
PTCD3-210ENST00000473829 DGAT2Q96PD7 388 aa17.63■□□□□ 0.41
PTCD3-210ENST00000473829 BARD1Q99728 777 aaKnown RBP17.63■□□□□ 0.41
PTCD3-210ENST00000473829 OR8D2Q9GZM6 311 aa17.63■□□□□ 0.41
PTCD3-210ENST00000473829 COPG1Q9Y678 874 aaKnown RBP17.63■□□□□ 0.41
PTCD3-210ENST00000473829 TMEM200CA6NKL6 621 aa17.62■□□□□ 0.41
PTCD3-210ENST00000473829 RGS16O15492 202 aaPredicted RBP17.62■□□□□ 0.41
PTCD3-210ENST00000473829 TRIM13O60858 407 aa17.62■□□□□ 0.41
PTCD3-210ENST00000473829 ZIC2O95409 532 aaPredicted RBP17.62■□□□□ 0.41
PTCD3-210ENST00000473829 GPR75O95800 540 aa17.62■□□□□ 0.41
PTCD3-210ENST00000473829 ALOX15P16050 662 aaPredicted RBP17.62■□□□□ 0.41
PTCD3-210ENST00000473829 TNNI3P19429 210 aa17.62■□□□□ 0.41
PTCD3-210ENST00000473829 CEP85LQ5SZL2 805 aa17.62■□□□□ 0.41
PTCD3-210ENST00000473829 CLEC6AQ6EIG7 209 aa17.62■□□□□ 0.41
PTCD3-210ENST00000473829 RPUSD3Q6P087 351 aaKnown RBP17.62■□□□□ 0.41
PTCD3-210ENST00000473829 ZNF227Q86WZ6 799 aa17.62■□□□□ 0.41
PTCD3-210ENST00000473829 GBP7Q8N8V2 638 aaPredicted RBP17.62■□□□□ 0.41
PTCD3-210ENST00000473829 GRHL3Q8TE85 626 aa17.62■□□□□ 0.41
PTCD3-210ENST00000473829 ZNF721Q8TF20 911 aa17.62■□□□□ 0.41
PTCD3-210ENST00000473829 TM4SF18Q96CE8 201 aa17.62■□□□□ 0.41
PTCD3-210ENST00000473829 TAAR6Q96RI8 345 aa17.62■□□□□ 0.41
PTCD3-210ENST00000473829 HES7Q9BYE0 225 aa17.62■□□□□ 0.41
PTCD3-210ENST00000473829 LIN28AQ9H9Z2 209 aaKnown RBP17.62■□□□□ 0.41
PTCD3-210ENST00000473829 WDR41Q9HAD4 459 aa17.62■□□□□ 0.41
PTCD3-210ENST00000473829 ABI3Q9P2A4 366 aa17.62■□□□□ 0.41
PTCD3-210ENST00000473829 SERTM1A2A2V5 107 aa17.61■□□□□ 0.41
PTCD3-210ENST00000473829 TCP11X1B4DZS4 312 aa17.61■□□□□ 0.41
PTCD3-210ENST00000473829 PRAMEF2O60811 474 aa17.61■□□□□ 0.41
PTCD3-210ENST00000473829 CHRNGP07510 517 aa17.61■□□□□ 0.41
PTCD3-210ENST00000473829 GNLYP22749 145 aa17.61■□□□□ 0.41
PTCD3-210ENST00000473829 ETV4P43268 484 aa17.61■□□□□ 0.41
PTCD3-210ENST00000473829 PLIN5Q00G26 463 aa17.61■□□□□ 0.41
PTCD3-210ENST00000473829 KCNC4Q03721 635 aa17.61■□□□□ 0.41
PTCD3-210ENST00000473829 OR1C1Q15619 314 aa17.61■□□□□ 0.41
PTCD3-210ENST00000473829 ZNF750Q32MQ0 723 aa17.61■□□□□ 0.41
PTCD3-210ENST00000473829 TNFAIP8L3Q5GJ75 292 aa17.61■□□□□ 0.41
PTCD3-210ENST00000473829 SPINK14Q6IE38 97 aa17.61■□□□□ 0.41
PTCD3-210ENST00000473829 ZCCHC23Q6ZST2 131 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms