RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 KIAA0895Q8NCT3 520 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 WDR36Q8NI36 951 aaKnown RBP2.18□□□□□ -2.06
CALD1-216ENST00000473714 THAP6Q8TBB0 222 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 URGCPQ8TCY9 931 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 WFIKKN2Q8TEU8 576 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 SSMEM1Q8WWF3 244 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 SLC44A1Q8WWI5 657 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 SEPT1Q8WYJ6 367 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 PROX1Q92786 737 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 DAZLQ92904 295 aaKnown RBP2.18□□□□□ -2.06
CALD1-216ENST00000473714 PIGTQ969N2 578 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 AP2M1Q96CW1 435 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 PGM2Q96G03 612 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 CDKN2AIPNLQ96HQ2 116 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 NSL1Q96IY1 281 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 GDAP1L1Q96MZ0 367 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 TMEM237Q96Q45 408 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 RUFY1Q96T51 708 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 PCYT2Q99447 389 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 FEVQ99581 238 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 CACNG6Q9BXT2 260 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 KRT23Q9C075 422 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 KCNN2Q9H2S1 579 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 CUEDC2Q9H467 287 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 PLAC1Q9HBJ0 212 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 ZDHHC4Q9NPG8 344 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 NOX4Q9NPH5 578 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 IARS2Q9NSE4 1012 aaKnown RBP2.18□□□□□ -2.06
CALD1-216ENST00000473714 DNAJC17Q9NVM6 304 aaKnown RBP2.18□□□□□ -2.06
CALD1-216ENST00000473714 COMMD8Q9NX08 183 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 NPAP1Q9NZP6 1156 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 RHCGQ9UBD6 479 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 POU2F3Q9UKI9 436 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 ADAM28Q9UKQ2 775 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 VDAC3Q9Y277 283 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 PTGDR2Q9Y5Y4 395 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 SPIN1Q9Y657 262 aaPredicted RBP2.18□□□□□ -2.06
CALD1-216ENST00000473714 PRKDCP78527 4128 aaKnown RBP2.18□□□□□ -2.06
CALD1-216ENST00000473714 HIVEP2P31629 2446 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 ZBED9Q6R2W3 1325 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 IGHV4-28A0A0C4DH34 117 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 A0A1W2PPM1 405 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 OR2M5A3KFT3 312 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 INAFM1C9JVW0 142 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 E5RJQ4 531 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 TMEM178BH3BS89 294 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 CACNB4O00305 520 aaPredicted RBP2.17□□□□□ -2.06
CALD1-216ENST00000473714 TNFRSF13BO14836 293 aaPredicted RBP2.17□□□□□ -2.06
CALD1-216ENST00000473714 SPRY3O43610 288 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 CRLF1O75462 422 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 SORBS2O94875 1100 aaKnown RBP2.17□□□□□ -2.06
CALD1-216ENST00000473714 GAS8O95995 478 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 C9P02748 559 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 GP1BAP07359 652 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 DANCRP0C864 163 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 SMIM18P0DKX4 95 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 PCP11498 1178 aaKnown RBP2.17□□□□□ -2.06
CALD1-216ENST00000473714 IRF2P14316 349 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 LBPP18428 481 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 CD22P20273 847 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 SCP2P22307 547 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 CORO1AP31146 461 aaKnown RBP2.17□□□□□ -2.06
CALD1-216ENST00000473714 KIF5BP33176 963 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 SERPINB6P35237 376 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 CASP3P42574 277 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 QARSP47897 775 aaKnown RBP2.17□□□□□ -2.06
CALD1-216ENST00000473714 AMTP48728 403 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 LHX1P48742 406 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 RGS7P49802 495 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 MMP15P51511 669 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 PDX1P52945 283 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 UBASH3AP57075 661 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 NLRP11P59045 1033 aaKnown RBP2.17□□□□□ -2.06
CALD1-216ENST00000473714 KIAA1024LP59773 190 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 SEC61A1P61619 476 aaKnown RBP2.17□□□□□ -2.06
CALD1-216ENST00000473714 EEF1A1P68104 462 aaKnown RBP2.17□□□□□ -2.06
CALD1-216ENST00000473714 DLK1P80370 383 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 ROR2Q01974 943 aaKnown RBP2.17□□□□□ -2.06
CALD1-216ENST00000473714 FOLH1Q04609 750 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 TLE4Q04727 773 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 EEF1A2Q05639 463 aaKnown RBP2.17□□□□□ -2.06
CALD1-216ENST00000473714 ILF2Q12905 390 aaKnown RBP2.17□□□□□ -2.06
CALD1-216ENST00000473714 TNK1Q13470 666 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 RPS6KA1Q15418 735 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 CDO1Q16878 200 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 SLC39A12Q504Y0 691 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 PRR30Q53SZ7 412 aaPredicted RBP2.17□□□□□ -2.06
CALD1-216ENST00000473714 VWA2Q5GFL6 755 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 TOR1AIP1Q5JTV8 583 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 EFHC1Q5JVL4 640 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 ELFN2Q5R3F8 820 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 TEX35Q5T0J7 233 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 LRRC38Q5VT99 294 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 EEF1A1P5Q5VTE0 462 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 TWF2Q6IBS0 349 aaKnown RBP2.17□□□□□ -2.06
CALD1-216ENST00000473714 OR7E24Q6IFN5 339 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 ASB18Q6ZVZ8 466 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 DSG4Q86SJ6 1040 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 LGI2Q8N0V4 545 aa2.17□□□□□ -2.06
CALD1-216ENST00000473714 ELMOD1Q8N336 334 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms