RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 TAPBPO15533 448 aa8.57□□□□□ -1.04
VCL-204ENST00000472585 ERI3O43414 337 aaKnown RBP8.57□□□□□ -1.04
VCL-204ENST00000472585 CRLF1O75462 422 aa8.57□□□□□ -1.04
VCL-204ENST00000472585 LRATO95237 230 aa8.57□□□□□ -1.04
VCL-204ENST00000472585 IFNA2P01563 188 aa8.57□□□□□ -1.04
VCL-204ENST00000472585 IFNA16P05015 189 aa8.57□□□□□ -1.04
VCL-204ENST00000472585 C1GALT1C1LP0DN25 315 aa8.57□□□□□ -1.04
VCL-204ENST00000472585 SAT1P21673 171 aa8.57□□□□□ -1.04
VCL-204ENST00000472585 TRPC1P48995 793 aa8.57□□□□□ -1.04
VCL-204ENST00000472585 AGFG1P52594 562 aaKnown RBP8.57□□□□□ -1.04
VCL-204ENST00000472585 ZNF136P52737 540 aa8.57□□□□□ -1.04
VCL-204ENST00000472585 SKP1P63208 163 aa8.57□□□□□ -1.04
VCL-204ENST00000472585 ID2Q02363 134 aa8.57□□□□□ -1.04
VCL-204ENST00000472585 ASPHQ12797 758 aa8.57□□□□□ -1.04
VCL-204ENST00000472585 FBXL19-AS1Q494R0 122 aa8.57□□□□□ -1.04
VCL-204ENST00000472585 FBXO48Q5FWF7 155 aa8.57□□□□□ -1.04
VCL-204ENST00000472585 TEDDM1Q5T9Z0 273 aa8.57□□□□□ -1.04
VCL-204ENST00000472585 LRRC8EQ6NSJ5 796 aa8.57□□□□□ -1.04
VCL-204ENST00000472585 HMBOX1Q6NT76 420 aa8.57□□□□□ -1.04
VCL-204ENST00000472585 ABHD17CQ6PCB6 329 aa8.57□□□□□ -1.04
VCL-204ENST00000472585 PODNL1Q6PEZ8 512 aa8.57□□□□□ -1.04
VCL-204ENST00000472585 TRMT10BQ6PF06 316 aaKnown RBP8.57□□□□□ -1.04
VCL-204ENST00000472585 ZNF793Q6ZN11 406 aa8.57□□□□□ -1.04
VCL-204ENST00000472585 GK5Q6ZS86 529 aa8.57□□□□□ -1.04
VCL-204ENST00000472585 GAS2L3Q86XJ1 694 aa8.57□□□□□ -1.04
VCL-204ENST00000472585 C9orf40Q8IXQ3 194 aa8.57□□□□□ -1.04
VCL-204ENST00000472585 PALM2Q8IXS6 379 aa8.57□□□□□ -1.04
VCL-204ENST00000472585 ZNF595Q8IYB9 648 aa8.57□□□□□ -1.04
VCL-204ENST00000472585 LRRC75A-AS1Q8N1F1 130 aa8.57□□□□□ -1.04
VCL-204ENST00000472585 GOLM1Q8NBJ4 401 aa8.57□□□□□ -1.04
VCL-204ENST00000472585 MORN4Q8NDC4 146 aa8.57□□□□□ -1.04
VCL-204ENST00000472585 SLC2A12Q8TD20 617 aa8.57□□□□□ -1.04
VCL-204ENST00000472585 CALML6Q8TD86 181 aa8.57□□□□□ -1.04
VCL-204ENST00000472585 ANKRD49Q8WVL7 239 aa8.57□□□□□ -1.04
VCL-204ENST00000472585 TMEM158Q8WZ71 300 aa8.57□□□□□ -1.04
VCL-204ENST00000472585 ZNF592Q92610 1267 aa8.57□□□□□ -1.04
VCL-204ENST00000472585 GAL3ST3Q96A11 431 aa8.57□□□□□ -1.04
VCL-204ENST00000472585 PDLIM5Q96HC4 596 aaKnown RBP8.57□□□□□ -1.04
VCL-204ENST00000472585 MAPKAP1Q9BPZ7 522 aa8.57□□□□□ -1.04
VCL-204ENST00000472585 AIF1LQ9BQI0 150 aa8.57□□□□□ -1.04
VCL-204ENST00000472585 CCDC77Q9BR77 488 aa8.57□□□□□ -1.04
VCL-204ENST00000472585 WDR83Q9BRX9 315 aaKnown RBP8.57□□□□□ -1.04
VCL-204ENST00000472585 FAM167BQ9BTA0 163 aa8.57□□□□□ -1.04
VCL-204ENST00000472585 NPLQ9BXD5 320 aaPredicted RBP8.57□□□□□ -1.04
VCL-204ENST00000472585 OR8D2Q9GZM6 311 aa8.57□□□□□ -1.04
VCL-204ENST00000472585 EPB41L4BQ9H329 900 aa8.57□□□□□ -1.04
VCL-204ENST00000472585 SACM1LQ9NTJ5 587 aa8.57□□□□□ -1.04
VCL-204ENST00000472585 DAPP1Q9UN19 280 aa8.57□□□□□ -1.04
VCL-204ENST00000472585 VWA7Q9Y334 891 aa8.57□□□□□ -1.04
VCL-204ENST00000472585 CLCA3PQ9Y6N3 262 aa8.57□□□□□ -1.04
VCL-204ENST00000472585 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.57□□□□□ -1.04
VCL-204ENST00000472585 KIAA1549Q9HCM3 1950 aa8.57□□□□□ -1.04
VCL-204ENST00000472585 NPEPPSL1A6NEC2 478 aa8.56□□□□□ -1.04
VCL-204ENST00000472585 URADA6NGE7 173 aa8.56□□□□□ -1.04
VCL-204ENST00000472585 C17orf105B2RV13 164 aa8.56□□□□□ -1.04
VCL-204ENST00000472585 RTCAO00442 366 aaKnown RBP8.56□□□□□ -1.04
VCL-204ENST00000472585 HCN1O60741 890 aa8.56□□□□□ -1.04
VCL-204ENST00000472585 EPPINO95925 133 aa8.56□□□□□ -1.04
VCL-204ENST00000472585 IGKV3-11P04433 115 aa8.56□□□□□ -1.04
VCL-204ENST00000472585 EPORP19235 508 aa8.56□□□□□ -1.04
VCL-204ENST00000472585 CD22P20273 847 aa8.56□□□□□ -1.04
VCL-204ENST00000472585 SOX18P35713 384 aa8.56□□□□□ -1.04
VCL-204ENST00000472585 SLC6A12P48065 614 aa8.56□□□□□ -1.04
VCL-204ENST00000472585 SLBPQ14493 270 aaKnown RBP eCLIP8.56□□□□□ -1.04
VCL-204ENST00000472585 ZNF460Q14592 562 aa8.56□□□□□ -1.04
VCL-204ENST00000472585 POU4F3Q15319 338 aa8.56□□□□□ -1.04
VCL-204ENST00000472585 PRAMEF20Q5VT98 475 aa8.56□□□□□ -1.04
VCL-204ENST00000472585 PRSS57Q6UWY2 283 aa8.56□□□□□ -1.04
VCL-204ENST00000472585 TMIGD1Q6UXZ0 262 aa8.56□□□□□ -1.04
VCL-204ENST00000472585 YTHDF3Q7Z739 585 aaKnown RBP8.56□□□□□ -1.04
VCL-204ENST00000472585 CXorf67Q86X51 503 aaPredicted RBP8.56□□□□□ -1.04
VCL-204ENST00000472585 OR4N5Q8IXE1 308 aa8.56□□□□□ -1.04
VCL-204ENST00000472585 LRRC25Q8N386 305 aaPredicted RBP8.56□□□□□ -1.04
VCL-204ENST00000472585 TMEM132CQ8N3T6 1108 aa8.56□□□□□ -1.04
VCL-204ENST00000472585 TBC1D19Q8N5T2 526 aa8.56□□□□□ -1.04
VCL-204ENST00000472585 SPC24Q8NBT2 197 aa8.56□□□□□ -1.04
VCL-204ENST00000472585 OR2L5Q8NG80 312 aa8.56□□□□□ -1.04
VCL-204ENST00000472585 OR8K3Q8NH51 312 aa8.56□□□□□ -1.04
VCL-204ENST00000472585 NEIL3Q8TAT5 605 aa8.56□□□□□ -1.04
VCL-204ENST00000472585 PAQR8Q8TEZ7 354 aa8.56□□□□□ -1.04
VCL-204ENST00000472585 PIGTQ969N2 578 aa8.56□□□□□ -1.04
VCL-204ENST00000472585 ESAMQ96AP7 390 aa8.56□□□□□ -1.04
VCL-204ENST00000472585 PPWD1Q96BP3 646 aaKnown RBP8.56□□□□□ -1.04
VCL-204ENST00000472585 FAR2Q96K12 515 aa8.56□□□□□ -1.04
VCL-204ENST00000472585 SGCZQ96LD1 299 aa8.56□□□□□ -1.04
VCL-204ENST00000472585 F2RL3Q96RI0 385 aa8.56□□□□□ -1.04
VCL-204ENST00000472585 TIMP4Q99727 224 aa8.56□□□□□ -1.04
VCL-204ENST00000472585 ZNF703Q9H7S9 590 aaPredicted RBP8.56□□□□□ -1.04
VCL-204ENST00000472585 ACKR4Q9NPB9 350 aa8.56□□□□□ -1.04
VCL-204ENST00000472585 DYRK1BQ9Y463 629 aa8.56□□□□□ -1.04
VCL-204ENST00000472585 PSAT1Q9Y617 370 aa8.56□□□□□ -1.04
VCL-204ENST00000472585 CHCHD2Q9Y6H1 151 aaPredicted RBP8.56□□□□□ -1.04
VCL-204ENST00000472585 KCNE2Q9Y6J6 123 aa8.56□□□□□ -1.04
VCL-204ENST00000472585 NCKAP5O14513 1909 aa8.56□□□□□ -1.04
VCL-204ENST00000472585 TRIM64A6NGJ6 449 aa8.55□□□□□ -1.04
VCL-204ENST00000472585 TRIM64BA6NI03 449 aa8.55□□□□□ -1.04
VCL-204ENST00000472585 B3GALT2O43825 422 aa8.55□□□□□ -1.04
VCL-204ENST00000472585 CLEC3AO75596 197 aa8.55□□□□□ -1.04
VCL-204ENST00000472585 CLPSP04118 112 aa8.55□□□□□ -1.04
VCL-204ENST00000472585 P04436 131 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms