RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 MRPS33Q9Y291 106 aaKnown RBP13.88□□□□□ -0.19
COL9A3-209ENST00000469852 SPACA6W5XKT8 324 aa13.88□□□□□ -0.19
COL9A3-209ENST00000469852 LOC400499M0QZD8 3231 aa13.87□□□□□ -0.19
COL9A3-209ENST00000469852 A0A087WV48 116 aa13.87□□□□□ -0.19
COL9A3-209ENST00000469852 A0A0G2JND7 137 aa13.87□□□□□ -0.19
COL9A3-209ENST00000469852 CDC14CA4D256 554 aa13.87□□□□□ -0.19
COL9A3-209ENST00000469852 E9PBE3 544 aa13.87□□□□□ -0.19
COL9A3-209ENST00000469852 AKAP10O43572 662 aa13.87□□□□□ -0.19
COL9A3-209ENST00000469852 KLHL41O60662 606 aa13.87□□□□□ -0.19
COL9A3-209ENST00000469852 CTNSO60931 367 aa13.87□□□□□ -0.19
COL9A3-209ENST00000469852 C8orf89P0DMQ9 161 aa13.87□□□□□ -0.19
COL9A3-209ENST00000469852 ACPPP15309 386 aa13.87□□□□□ -0.19
COL9A3-209ENST00000469852 DRD4P21917 467 aa13.87□□□□□ -0.19
COL9A3-209ENST00000469852 MMP11P24347 488 aa13.87□□□□□ -0.19
COL9A3-209ENST00000469852 HSD17B7P56937 341 aa13.87□□□□□ -0.19
COL9A3-209ENST00000469852 FOLH1Q04609 750 aa13.87□□□□□ -0.19
COL9A3-209ENST00000469852 EEF1A2Q05639 463 aaKnown RBP13.87□□□□□ -0.19
COL9A3-209ENST00000469852 SLC13A2Q13183 592 aa13.87□□□□□ -0.19
COL9A3-209ENST00000469852 SSPNQ14714 243 aa13.87□□□□□ -0.19
COL9A3-209ENST00000469852 UGT8Q16880 541 aa13.87□□□□□ -0.19
COL9A3-209ENST00000469852 OR52E8Q6IFG1 317 aa13.87□□□□□ -0.19
COL9A3-209ENST00000469852 ANKRD26P1Q6NSI1 321 aa13.87□□□□□ -0.19
COL9A3-209ENST00000469852 SLC48A1Q6P1K1 146 aa13.87□□□□□ -0.19
COL9A3-209ENST00000469852 TMEM205Q6UW68 189 aa13.87□□□□□ -0.19
COL9A3-209ENST00000469852 ANKRD37Q7Z713 158 aa13.87□□□□□ -0.19
COL9A3-209ENST00000469852 TMEM132CQ8N3T6 1108 aa13.87□□□□□ -0.19
COL9A3-209ENST00000469852 KRTCAP2Q8N6L1 136 aa13.87□□□□□ -0.19
COL9A3-209ENST00000469852 CEP70Q8NHQ1 597 aa13.87□□□□□ -0.19
COL9A3-209ENST00000469852 EFHD1Q9BUP0 239 aa13.87□□□□□ -0.19
COL9A3-209ENST00000469852 TMEM120AQ9BXJ8 343 aa13.87□□□□□ -0.19
COL9A3-209ENST00000469852 TRIM55Q9BYV6 548 aa13.87□□□□□ -0.19
COL9A3-209ENST00000469852 RABEP2Q9H5N1 569 aa13.87□□□□□ -0.19
COL9A3-209ENST00000469852 TCF7L2Q9NQB0 619 aa13.87□□□□□ -0.19
COL9A3-209ENST00000469852 SEMA3GQ9NS98 782 aa13.87□□□□□ -0.19
COL9A3-209ENST00000469852 AIG1Q9NVV5 245 aa13.87□□□□□ -0.19
COL9A3-209ENST00000469852 NOP53Q9NZM5 478 aaKnown RBP13.87□□□□□ -0.19
COL9A3-209ENST00000469852 MMACHCQ9Y4U1 282 aa13.87□□□□□ -0.19
COL9A3-209ENST00000469852 FASNP49327 2511 aaKnown RBP13.87□□□□□ -0.19
COL9A3-209ENST00000469852 CROCCQ5TZA2 2017 aa13.86□□□□□ -0.19
COL9A3-209ENST00000469852 TCRBV16S1A1N1A0A5B0 115 aa13.86□□□□□ -0.19
COL9A3-209ENST00000469852 C1orf226A1L170 272 aa13.86□□□□□ -0.19
COL9A3-209ENST00000469852 CLDN4O14493 209 aa13.86□□□□□ -0.19
COL9A3-209ENST00000469852 ANKRD28O15084 1053 aa13.86□□□□□ -0.19
COL9A3-209ENST00000469852 GUCY1B2O75343 617 aa13.86□□□□□ -0.19
COL9A3-209ENST00000469852 PRPS2P11908 318 aa13.86□□□□□ -0.19
COL9A3-209ENST00000469852 DDCP20711 480 aa13.86□□□□□ -0.19
COL9A3-209ENST00000469852 MAPK1P28482 360 aa13.86□□□□□ -0.19
COL9A3-209ENST00000469852 TLX1P31314 330 aaPredicted RBP13.86□□□□□ -0.19
COL9A3-209ENST00000469852 PTGER1P34995 402 aa13.86□□□□□ -0.19
COL9A3-209ENST00000469852 NME5P56597 212 aa13.86□□□□□ -0.19
COL9A3-209ENST00000469852 IGLV3-21P80748 117 aaPredicted RBP13.86□□□□□ -0.19
COL9A3-209ENST00000469852 MAD2L1Q13257 205 aaPredicted RBP13.86□□□□□ -0.19
COL9A3-209ENST00000469852 ATP1A4Q13733 1029 aa13.86□□□□□ -0.19
COL9A3-209ENST00000469852 NSDHLQ15738 373 aa13.86□□□□□ -0.19
COL9A3-209ENST00000469852 ZNF385BQ569K4 471 aa13.86□□□□□ -0.19
COL9A3-209ENST00000469852 KIRREL2Q6UWL6 708 aa13.86□□□□□ -0.19
COL9A3-209ENST00000469852 DGAT2L6Q6ZPD8 337 aa13.86□□□□□ -0.19
COL9A3-209ENST00000469852 ACAD11Q709F0 780 aa13.86□□□□□ -0.19
COL9A3-209ENST00000469852 MRGPREQ86SM8 312 aa13.86□□□□□ -0.19
COL9A3-209ENST00000469852 TICAM1Q8IUC6 712 aa13.86□□□□□ -0.19
COL9A3-209ENST00000469852 DOK4Q8TEW6 326 aa13.86□□□□□ -0.19
COL9A3-209ENST00000469852 TANKQ92844 425 aa13.86□□□□□ -0.19
COL9A3-209ENST00000469852 EXOSC8Q96B26 276 aaKnown RBP13.86□□□□□ -0.19
COL9A3-209ENST00000469852 CRELD1Q96HD1 420 aa13.86□□□□□ -0.19
COL9A3-209ENST00000469852 TEX37Q96LM6 180 aa13.86□□□□□ -0.19
COL9A3-209ENST00000469852 CATSPER2Q96P56 530 aa13.86□□□□□ -0.19
COL9A3-209ENST00000469852 WDR77Q9BQA1 342 aaPredicted RBP13.86□□□□□ -0.19
COL9A3-209ENST00000469852 FAIM2Q9BWQ8 316 aa13.86□□□□□ -0.19
COL9A3-209ENST00000469852 ALOXE3Q9BYJ1 711 aa13.86□□□□□ -0.19
COL9A3-209ENST00000469852 WDR41Q9HAD4 459 aa13.86□□□□□ -0.19
COL9A3-209ENST00000469852 EIF3LQ9Y262 564 aaKnown RBP13.86□□□□□ -0.19
COL9A3-209ENST00000469852 GPR45Q9Y5Y3 372 aa13.86□□□□□ -0.19
COL9A3-209ENST00000469852 PTPRQQ9UMZ3 2332 aa13.86□□□□□ -0.19
COL9A3-209ENST00000469852 LOC102723996A0A087X1L8 192 aa13.85□□□□□ -0.19
COL9A3-209ENST00000469852 GMNCA6NCL1 334 aa13.85□□□□□ -0.19
COL9A3-209ENST00000469852 ZNF891A8MT65 544 aaPredicted RBP13.85□□□□□ -0.19
COL9A3-209ENST00000469852 A8MUA0 341 aa13.85□□□□□ -0.19
COL9A3-209ENST00000469852 ERAL1O75616 437 aaKnown RBP13.85□□□□□ -0.19
COL9A3-209ENST00000469852 GPR75O95800 540 aa13.85□□□□□ -0.19
COL9A3-209ENST00000469852 TROVE2P10155 538 aaKnown RBP eCLIP13.85□□□□□ -0.19
COL9A3-209ENST00000469852 COX6A1P12074 109 aa13.85□□□□□ -0.19
COL9A3-209ENST00000469852 DRD2P14416 443 aa13.85□□□□□ -0.19
COL9A3-209ENST00000469852 GSTM5P46439 218 aa13.85□□□□□ -0.19
COL9A3-209ENST00000469852 CDC20Q12834 499 aa13.85□□□□□ -0.19
COL9A3-209ENST00000469852 PDE7AQ13946 482 aa13.85□□□□□ -0.19
COL9A3-209ENST00000469852 HEPACAMQ14CZ8 416 aa13.85□□□□□ -0.19
COL9A3-209ENST00000469852 PCOLCEQ15113 449 aa13.85□□□□□ -0.19
COL9A3-209ENST00000469852 MPEG1Q2M385 716 aa13.85□□□□□ -0.19
COL9A3-209ENST00000469852 COL28A1Q2UY09 1125 aa13.85□□□□□ -0.19
COL9A3-209ENST00000469852 SOWAHCQ53LP3 525 aaPredicted RBP13.85□□□□□ -0.19
COL9A3-209ENST00000469852 SFT2D3Q587I9 215 aa13.85□□□□□ -0.19
COL9A3-209ENST00000469852 CCDC81Q6ZN84 652 aa13.85□□□□□ -0.19
COL9A3-209ENST00000469852 LRRC69Q6ZNQ3 347 aa13.85□□□□□ -0.19
COL9A3-209ENST00000469852 IKBIPQ70UQ0 350 aa13.85□□□□□ -0.19
COL9A3-209ENST00000469852 SPATA19Q7Z5L4 167 aa13.85□□□□□ -0.19
COL9A3-209ENST00000469852 RIMKLAQ8IXN7 391 aa13.85□□□□□ -0.19
COL9A3-209ENST00000469852 OR11G2Q8NGC1 345 aa13.85□□□□□ -0.19
COL9A3-209ENST00000469852 C10orf82Q8WW14 230 aa13.85□□□□□ -0.19
COL9A3-209ENST00000469852 PPWD1Q96BP3 646 aaKnown RBP13.85□□□□□ -0.19
COL9A3-209ENST00000469852 KLHL29Q96CT2 875 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms