RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 LRRK1Q38SD2 2015 aa5.99□□□□□ -1.45
PTCD3-208ENST00000469585 DOCK9Q9BZ29 2069 aa5.98□□□□□ -1.45
PTCD3-208ENST00000469585 TRBV5-4A0A0C4DH59 114 aa5.98□□□□□ -1.45
PTCD3-208ENST00000469585 MED19A0JLT2 244 aaPredicted RBP5.98□□□□□ -1.45
PTCD3-208ENST00000469585 FAM149AA5PLN7 773 aa5.98□□□□□ -1.45
PTCD3-208ENST00000469585 WIPF3A6NGB9 483 aa5.98□□□□□ -1.45
PTCD3-208ENST00000469585 LINC01548A6NM66 108 aa5.98□□□□□ -1.45
PTCD3-208ENST00000469585 C2orf74A8MZ97 194 aa5.98□□□□□ -1.45
PTCD3-208ENST00000469585 TOX3O15405 576 aaPredicted RBP5.98□□□□□ -1.45
PTCD3-208ENST00000469585 AVILO75366 819 aa5.98□□□□□ -1.45
PTCD3-208ENST00000469585 SEC31AO94979 1220 aaKnown RBP5.98□□□□□ -1.45
PTCD3-208ENST00000469585 CATP04040 527 aaKnown RBP5.98□□□□□ -1.45
PTCD3-208ENST00000469585 GSTA2P09210 222 aa5.98□□□□□ -1.45
PTCD3-208ENST00000469585 ENO3P13929 434 aaPredicted RBP5.98□□□□□ -1.45
PTCD3-208ENST00000469585 CDH3P22223 829 aa5.98□□□□□ -1.45
PTCD3-208ENST00000469585 RPS3P23396 243 aaKnown RBP eCLIP5.98□□□□□ -1.45
PTCD3-208ENST00000469585 MCM3P25205 808 aa5.98□□□□□ -1.45
PTCD3-208ENST00000469585 CD82P27701 267 aa5.98□□□□□ -1.45
PTCD3-208ENST00000469585 NMBRP28336 390 aa5.98□□□□□ -1.45
PTCD3-208ENST00000469585 FMO4P31512 558 aa5.98□□□□□ -1.45
PTCD3-208ENST00000469585 CCKBRP32239 447 aa5.98□□□□□ -1.45
PTCD3-208ENST00000469585 FOXN2P32314 431 aa5.98□□□□□ -1.45
PTCD3-208ENST00000469585 HSD17B2P37059 387 aa5.98□□□□□ -1.45
PTCD3-208ENST00000469585 GRIA1P42261 906 aa5.98□□□□□ -1.45
PTCD3-208ENST00000469585 PLTPP55058 493 aa5.98□□□□□ -1.45
PTCD3-208ENST00000469585 CSE1LP55060 971 aaKnown RBP5.98□□□□□ -1.45
PTCD3-208ENST00000469585 UCNP55089 124 aa5.98□□□□□ -1.45
PTCD3-208ENST00000469585 OR1D5P58170 312 aa5.98□□□□□ -1.45
PTCD3-208ENST00000469585 XIAPP98170 497 aa5.98□□□□□ -1.45
PTCD3-208ENST00000469585 ACVR1Q04771 509 aa5.98□□□□□ -1.45
PTCD3-208ENST00000469585 EFR3AQ14156 821 aa5.98□□□□□ -1.45
PTCD3-208ENST00000469585 IHHQ14623 411 aa5.98□□□□□ -1.45
PTCD3-208ENST00000469585 CRYMQ14894 314 aa5.98□□□□□ -1.45
PTCD3-208ENST00000469585 RPE65Q16518 533 aa5.98□□□□□ -1.45
PTCD3-208ENST00000469585 ISXQ2M1V0 245 aa5.98□□□□□ -1.45
PTCD3-208ENST00000469585 PLEKHS1Q5SXH7 462 aa5.98□□□□□ -1.45
PTCD3-208ENST00000469585 FAM182AQ5T1J6 154 aa5.98□□□□□ -1.45
PTCD3-208ENST00000469585 DCAF12Q5T6F0 453 aa5.98□□□□□ -1.45
PTCD3-208ENST00000469585 TMEM71Q6P5X7 295 aa5.98□□□□□ -1.45
PTCD3-208ENST00000469585 UNC5DQ6UXZ4 953 aa5.98□□□□□ -1.45
PTCD3-208ENST00000469585 CEACAM20Q6UY09 585 aa5.98□□□□□ -1.45
PTCD3-208ENST00000469585 CCNI2Q6ZMN8 369 aaPredicted RBP5.98□□□□□ -1.45
PTCD3-208ENST00000469585 IFT20Q8IY31 132 aa5.98□□□□□ -1.45
PTCD3-208ENST00000469585 TBC1D21Q8IYX1 336 aa5.98□□□□□ -1.45
PTCD3-208ENST00000469585 PELI3Q8N2H9 469 aa5.98□□□□□ -1.45
PTCD3-208ENST00000469585 C17orf53Q8N3J3 647 aaPredicted RBP5.98□□□□□ -1.45
PTCD3-208ENST00000469585 TBC1D19Q8N5T2 526 aa5.98□□□□□ -1.45
PTCD3-208ENST00000469585 NAT8LQ8N9F0 302 aa5.98□□□□□ -1.45
PTCD3-208ENST00000469585 OR13J1Q8NGT2 312 aa5.98□□□□□ -1.45
PTCD3-208ENST00000469585 CFAP61Q8NHU2 1237 aa5.98□□□□□ -1.45
PTCD3-208ENST00000469585 DENND1AQ8TEH3 1009 aa5.98□□□□□ -1.45
PTCD3-208ENST00000469585 KIAA1143Q96AT1 154 aaPredicted RBP5.98□□□□□ -1.45
PTCD3-208ENST00000469585 ZNF578Q96N58 590 aaPredicted RBP5.98□□□□□ -1.45
PTCD3-208ENST00000469585 NPAS1Q99742 590 aa5.98□□□□□ -1.45
PTCD3-208ENST00000469585 CCDC77Q9BR77 488 aa5.98□□□□□ -1.45
PTCD3-208ENST00000469585 TRIM51Q9BSJ1 452 aa5.98□□□□□ -1.45
PTCD3-208ENST00000469585 EFHD1Q9BUP0 239 aa5.98□□□□□ -1.45
PTCD3-208ENST00000469585 KIR3DX1Q9H7L2 352 aa5.98□□□□□ -1.45
PTCD3-208ENST00000469585 IARS2Q9NSE4 1012 aaKnown RBP5.98□□□□□ -1.45
PTCD3-208ENST00000469585 SLC2A6Q9UGQ3 507 aa5.98□□□□□ -1.45
PTCD3-208ENST00000469585 KLK13Q9UKR3 277 aa5.98□□□□□ -1.45
PTCD3-208ENST00000469585 CHMP2BQ9UQN3 213 aa5.98□□□□□ -1.45
PTCD3-208ENST00000469585 RCE1Q9Y256 329 aa5.98□□□□□ -1.45
PTCD3-208ENST00000469585 CRYL1Q9Y2S2 319 aa5.98□□□□□ -1.45
PTCD3-208ENST00000469585 SNX24Q9Y343 169 aa5.98□□□□□ -1.45
PTCD3-208ENST00000469585 VPS13AQ96RL7 3174 aa5.98□□□□□ -1.45
PTCD3-208ENST00000469585 CEP250Q9BV73 2442 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 KNL1Q8NG31 2342 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 IGLV3-16A0A075B6K0 115 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 IGHV1OR21-1A0A087WYE8 117 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 TRABD2BA6NFA1 517 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 OR51F1A6NGY5 319 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 AGAP5A6NIR3 686 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 OR52A4PA6NMU1 304 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 AGAP14A8MT82 685 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 POLR1CO15160 346 aaPredicted RBP5.97□□□□□ -1.45
PTCD3-208ENST00000469585 RAD51CO43502 376 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 ZBTB14O43829 449 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 KRT38O76015 456 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 TMEM63AO94886 807 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 TNFSF15O95150 251 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 CCNDBP1O95273 360 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 SYF2O95926 243 aaKnown RBP5.97□□□□□ -1.45
PTCD3-208ENST00000469585 MT-ND3P03897 115 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 CBSLP0DN79 551 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 PKMP14618 531 aaKnown RBP5.97□□□□□ -1.45
PTCD3-208ENST00000469585 ITGB6P18564 788 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 CYP2A7P20853 494 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 IDUAP35475 653 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 CBSP35520 551 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 ELK3P41970 407 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 CAPZBP47756 277 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 CTSCP53634 463 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 LIMK2P53671 638 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 ADARP55265 1226 aaKnown RBP5.97□□□□□ -1.45
PTCD3-208ENST00000469585 ERVPABLB-1P60509 514 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 GUCY2DQ02846 1103 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 ACY1Q03154 408 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 FOXM1Q08050 763 aa5.97□□□□□ -1.45
PTCD3-208ENST00000469585 NAB1Q13506 487 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms